Gchil6551.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6551.t1
Unique NameGchil6551.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length315
Homology
BLAST of Gchil6551.t1 vs. uniprot
Match: A0A2V3IY45_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IY45_9FLOR)

HSP 1 Score: 363 bits (933), Expect = 2.950e-123
Identity = 165/295 (55.93%), Postives = 207/295 (70.17%), Query Frame = 0
Query:   20 TVGTRFKAAATCVSQQNSCGVDIAACSILCKPSIYVAEQSLNCRDAACKYCSWASSREDRACSSWAIRHWCAAFFRSRQVNSPTPSXXXXXXXXISTQFSLARDDPFKCVWYGRRNHLVIDMKYIPPRGSWTRNGHGLEWKKDRLSGIDRPGSGQMCFSFRVPNNGNYYFTGLTSAPHPTDHNDMWVKLSSGIRLYRGKTQAFRYTTKVYIKAYQNKGKDQVNDILSSVDHDPHYFISENMLSNETQQVCVSGRSSKFTFYKLVFVRCWLGNGSCNRWDTWLRRSMKYLIDSICK 314
            T GT FKAAA CV++QN C   +A  SI CK   +V +QS +CR+AACKYC+W SS  D AC SWAIRHWCA+F   +   +  P               +   DP++CVW+GR   LV+D+K+    G WT+NG GLEWK+    GID PGSG+MCF F VP +G YYFT LTSAPHPTDHNDMWV++ +GIRLYRGKT  +  T + YIKAYQN G++++NDILSSVDH+PHYF+SE ++ NET  VC+SGRSS+FT YKLVFV+C   NGSCNRW  ++R  M  L++ ICK
Sbjct:   13 TYGTFFKAAAECVARQNLCDSHVAKSSIHCKEDTFVKKQSRSCRNAACKYCTWPSSTNDNACYSWAIRHWCASFPGVQNGQTLKPGR-------------MPHKDPYRCVWHGRDKELVLDLKFFTAWGGWTQNGDGLEWKRYLSKGIDEPGSGEMCFKFAVPEDGFYYFTALTSAPHPTDHNDMWVRIQTGIRLYRGKTHVYWMTVRKYIKAYQNLGENRINDILSSVDHNPHYFVSEKLMQNETHTVCISGRSSRFTVYKLVFVKCSPTNGSCNRWGRYIREKMNSLVEPICK 294          
BLAST of Gchil6551.t1 vs. uniprot
Match: A0A1X6PGN3_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PGN3_PORUM)

HSP 1 Score: 90.9 bits (224), Expect = 1.320e-16
Identity = 61/192 (31.77%), Postives = 91/192 (47.40%), Query Frame = 0
Query:  127 KCVWYGRRNHLV-IDMKYIPPRGSWTRNG----HGLEWKKDRLS-GIDRPGS-GQMCFSFRVPNNGNYYFTGLTSAPHPTDHNDMWVKLSSGIRLYRGKTQAFRYTTKVYIKAYQNKGKDQVNDILSSVDHDPHYFISENMLSNETQQVCVSGRSSKFTFYKLVFVRCWLGNGSCNRWDTWLRRSMKYLIDS 311
            +C  Y   N +V I          W  +       L +K ++ S GID  G  G   + F+V   G Y      +APHPTDHND+W+KL +G R Y+G T      T  + K YQN+GK++      +VD D HY ++  + + ET    +SGRSSKF    +  + C     +C    T+   ++K  + S
Sbjct:  476 RCAVYAGANGVVRIPATSAGAGDGWVESTVAGREALVFKPEKQSTGIDGAGRVGVKEYKFKVEEAGAYRVMMRLNAPHPTDHNDLWMKLGAGARKYQGTT--ISSLTSSWFKVYQNRGKNEWMLGGVTVDFDGHYLLTRPLTAGETFTFSISGRSSKFAVADIYLLVCDPSKSACGGGWTYFNTAVKMGVSS 665          
BLAST of Gchil6551.t1 vs. uniprot
Match: A0A1X6NQL4_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NQL4_PORUM)

HSP 1 Score: 72.8 bits (177), Expect = 3.040e-11
Identity = 46/141 (32.62%), Postives = 68/141 (48.23%), Query Frame = 0
Query:  157 LEWKKD--RLSGIDRPGSGQMCFSFRVPNNGNYYFTGLTSAPHPTDHNDMWVKLSSGI-RLYRGKTQAFRYTTKVYIKAYQNKGKDQVNDILSSVDHDPHYFISENMLSNETQQVCVSGRSSKFTFYKLVFVRCWLGNGSC 294
            L WK D    + +D PG+G   ++FR    G Y      SAPHPTD ND+WV+L  G  R+  G  +     T  + K YQN G  +      +VD D HY ++  + +     + +SGRSS+     ++ V C +    C
Sbjct:   93 LTWKPDVDDAASLDAPGTGTREWTFRADVAGTYRVVLGLSAPHPTDFNDVWVRLGDGAARVKVGSGRVAIPETAGWFKVYQNAGGGRWVFGGVTVDFDGHYPLTRRLAAGAEFTIGLSGRSSRLAVADVMLVACDVAGTDC 233          
The following BLAST results are available for this feature:
BLAST of Gchil6551.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IY45_9FLOR2.950e-12355.93Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6PGN3_PORUM1.320e-1631.77Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A1X6NQL4_PORUM3.040e-1132.62Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..314
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004390_piloncontigtig00004390_pilon:591558..592502 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6551.t1Gchil6551.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004390_pilon 591558..592502 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6551.t1 ID=Gchil6551.t1|Name=Gchil6551.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=315bp
MKIVFLVLFFLWIPKFPACTVGTRFKAAATCVSQQNSCGVDIAACSILCK
PSIYVAEQSLNCRDAACKYCSWASSREDRACSSWAIRHWCAAFFRSRQVN
SPTPSPTPSTSPDISTQFSLARDDPFKCVWYGRRNHLVIDMKYIPPRGSW
TRNGHGLEWKKDRLSGIDRPGSGQMCFSFRVPNNGNYYFTGLTSAPHPTD
HNDMWVKLSSGIRLYRGKTQAFRYTTKVYIKAYQNKGKDQVNDILSSVDH
DPHYFISENMLSNETQQVCVSGRSSKFTFYKLVFVRCWLGNGSCNRWDTW
LRRSMKYLIDSICK*
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