Gchil6645.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6645.t1
Unique NameGchil6645.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length130
Homology
BLAST of Gchil6645.t1 vs. uniprot
Match: A0A2V3J1E3_9FLOR (Nuclear transport factor 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1E3_9FLOR)

HSP 1 Score: 192 bits (488), Expect = 3.910e-61
Identity = 90/125 (72.00%), Postives = 108/125 (86.40%), Query Frame = 0
Query:    5 IEQIGKAFVNHYYNIFDTNRENLRSLYKDPSILTFEGEMCLGPDNIIQKLTNLPLQKVRHQIVSMDCQPTSAVQPNGILISVSGNLVLDNEQIPVKFAQCFYLLPVPGESQSFWVSNDVFRLNYG 129
            +EQIG AFVN+YY+IFD+NRENLR LYKD S+LTFEG+ C+G D I+ KLT+L L++V+H+I++MD QPT AVQPNGIL+SVSGNLVLDNEQ PVKFAQCFYLLP   E  +FWV ND+FRLNYG
Sbjct:    5 MEQIGTAFVNYYYSIFDSNRENLRPLYKDQSVLTFEGQKCMGADEIMNKLTSLGLKQVKHKIITMDVQPTLAVQPNGILVSVSGNLVLDNEQNPVKFAQCFYLLP---EGSNFWVQNDIFRLNYG 126          
BLAST of Gchil6645.t1 vs. uniprot
Match: R7QSP7_CHOCR (Nuclear transport factor 2 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QSP7_CHOCR)

HSP 1 Score: 163 bits (413), Expect = 1.140e-49
Identity = 73/129 (56.59%), Postives = 95/129 (73.64%), Query Frame = 0
Query:    1 MNTGIEQIGKAFVNHYYNIFDTNRENLRSLYKDPSILTFEGEMCLGPDNIIQKLTNLPLQKVRHQIVSMDCQPTSAVQPNGILISVSGNLVLDNEQIPVKFAQCFYLLPVPGESQSFWVSNDVFRLNYG 129
            M T  + +G+AF   YY++FD+NR  L  LY++ S+L+FEG   +G   I+ KL  LP Q+V+H+IV+ DCQPT AVQPNGILISVSGNLV+D+   P+KFAQCF+LLP P    +FWV ND+FRLN G
Sbjct:    1 MTTSFQSVGEAFTKTYYSLFDSNRSQLLPLYREQSMLSFEGSQFMGAQAIVNKLVELPFQRVKHEIVTCDCQPTMAVQPNGILISVSGNLVIDDNVNPMKFAQCFHLLPDPASPNNFWVHNDIFRLNLG 129          
BLAST of Gchil6645.t1 vs. uniprot
Match: M2Y8E2_GALSU (Nuclear transport factor, putative n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y8E2_GALSU)

HSP 1 Score: 160 bits (406), Expect = 2.330e-48
Identity = 74/124 (59.68%), Postives = 97/124 (78.23%), Query Frame = 0
Query:    6 EQIGKAFVNHYYNIFDTNRENLRSLYKDPSILTFEGEMCLGPDNIIQKLTNLPLQKVRHQIVSMDCQPTSAVQPNGILISVSGNLVLDNEQIPVKFAQCFYLLPVPGESQSFWVSNDVFRLNYG 129
            EQ+G+AFV HYYN FD++R NL  LY++ S+LTFEGE  +G   I+ KL+ LP QKV+HQIV+ DCQPT   QP+GIL+ V+GNL++D+ Q P+KF+QCFYLLP    + S+WV ND+FRLNYG
Sbjct:   25 EQVGEAFVQHYYNTFDSSRSNLGPLYRENSMLTFEGEKYMGVQQIVGKLSALPFQKVQHQIVTCDCQPTQT-QPSGILVFVNGNLLVDDSQNPLKFSQCFYLLPDSTNAASYWVHNDMFRLNYG 147          
BLAST of Gchil6645.t1 vs. uniprot
Match: A0A7S0ZAF8_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZAF8_9RHOD)

HSP 1 Score: 151 bits (382), Expect = 7.380e-45
Identity = 73/124 (58.87%), Postives = 91/124 (73.39%), Query Frame = 0
Query:    6 EQIGKAFVNHYYNIFDTNRENLRSLYKDPSILTFEGEMCLGPDNIIQKLTNLPLQKVRHQIVSMDCQPTSAVQPNGILISVSGNLVLDNEQIPVKFAQCFYLLPVPGESQSFWVSNDVFRLNYG 129
            + +G++FV HYY  FDTNR NL  LY+D S+L+FEGE  +G   IIQKL +LP QKV HQIV+ DCQP  A QPNGIL+ VSGNLV+D+   P+KF+Q F LL  P    S++V ND+FRLNYG
Sbjct:   13 QSVGESFVAHYYQNFDTNRANLAPLYRDNSMLSFEGEQFMGIQPIIQKLVSLPFQKVVHQIVTCDCQPVLASQPNGILVFVSGNLVVDDSPNPMKFSQTFNLLSDPSNPNSYFVHNDLFRLNYG 136          
BLAST of Gchil6645.t1 vs. uniprot
Match: A0A5J4YZW0_PORPP (Nuclear transport factor 2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YZW0_PORPP)

HSP 1 Score: 150 bits (380), Expect = 1.310e-44
Identity = 71/124 (57.26%), Postives = 89/124 (71.77%), Query Frame = 0
Query:    6 EQIGKAFVNHYYNIFDTNRENLRSLYKDPSILTFEGEMCLGPDNIIQKLTNLPLQKVRHQIVSMDCQPTSAVQPNGILISVSGNLVLDNEQIPVKFAQCFYLLPVPGESQSFWVSNDVFRLNYG 129
            +Q+G+AFV HYY  FD+NR  L  LY+D S+LTFEGE  +GP  I+QKL  LP Q V HQ+V+ DCQP    QPNGI++ VSGNLV+D+    +KF+Q F LLP P    SF+V ND+FRLNYG
Sbjct:    9 QQVGEAFVAHYYQNFDSNRGGLAPLYRDTSMLTFEGEQFMGPQAIVQKLQGLPFQTVVHQVVTCDCQPVIGSQPNGIVVFVSGNLVVDDSPNAMKFSQTFNLLPDPANPSSFFVHNDLFRLNYG 132          
BLAST of Gchil6645.t1 vs. uniprot
Match: M1V7U4_CYAM1 (Similar to nuclear transport factor 2 n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1V7U4_CYAM1)

HSP 1 Score: 147 bits (370), Expect = 4.230e-43
Identity = 66/124 (53.23%), Postives = 89/124 (71.77%), Query Frame = 0
Query:    6 EQIGKAFVNHYYNIFDTNRENLRSLYKDPSILTFEGEMCLGPDNIIQKLTNLPLQKVRHQIVSMDCQPTSAVQPNGILISVSGNLVLDNEQIPVKFAQCFYLLPVPGESQSFWVSNDVFRLNYG 129
            E + +AFVNHYY++FDT+R  L +LY++ S+LTFEG  C+G   I +KL +LP QKVRHQ+V+ D QP      NG+L+ V+G+L +D+   P+KFAQ F+LLP  G    FWV ND+FRLNYG
Sbjct:    8 ELLAEAFVNHYYSVFDTDRTQLAALYREVSMLTFEGNACMGASAITEKLVSLPFQKVRHQVVTCDAQPVLPESLNGVLVFVNGDLTVDDSNQPIKFAQVFHLLPDQGNPGMFWVYNDLFRLNYG 131          
BLAST of Gchil6645.t1 vs. uniprot
Match: A0A7S3AB15_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3AB15_9RHOD)

HSP 1 Score: 144 bits (363), Expect = 4.210e-42
Identity = 68/129 (52.71%), Postives = 91/129 (70.54%), Query Frame = 0
Query:    1 MNTGIEQIGKAFVNHYYNIFDTNRENLRSLYKDPSILTFEGEMCLGPDNIIQKLTNLPLQKVRHQIVSMDCQPTSAVQPNGILISVSGNLVLDNEQIPVKFAQCFYLLPVPGESQSFWVSNDVFRLNYG 129
            M    +QIG+AFV HYY+ FDTNR  L SLY+  S+L+FEGE  +G + I+QKL NL  Q+V+HQ+ + D QP  A QPN IL+ VSG L++D+   P+KF+Q F+L+P  G    +WV ND+FRLNYG
Sbjct:    1 MGDQYQQIGEAFVKHYYSTFDTNRAGLVSLYQGNSMLSFEGETFMGAEAIVQKLANLSFQRVQHQVTTFDVQPVVAAQPNSILVFVSGQLLVDDSTNPIKFSQTFHLMPKEG---GYWVHNDMFRLNYG 126          
BLAST of Gchil6645.t1 vs. uniprot
Match: A0A7J7IQJ2_9RHOD (Nuclear transport factor 2 n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IQJ2_9RHOD)

HSP 1 Score: 140 bits (352), Expect = 2.310e-40
Identity = 65/122 (53.28%), Postives = 85/122 (69.67%), Query Frame = 0
Query:    8 IGKAFVNHYYNIFDTNRENLRSLYKDPSILTFEGEMCLGPDNIIQKLTNLPLQKVRHQIVSMDCQPTSAVQPNGILISVSGNLVLDNEQIPVKFAQCFYLLPVPGESQSFWVSNDVFRLNYG 129
            I +AFVNHYY++FDT+R  L +LY+D S+LTFEG  C+G   I QKL +LP QKVRH +V+ D QP      NG+L+ V+G+L +D+    +KFAQ F+LLP       FWV ND+FRLNYG
Sbjct:   10 IAEAFVNHYYSVFDTDRSQLATLYRDVSMLTFEGTACMGASAITQKLVSLPFQKVRHHVVTCDAQPVLPESLNGVLVFVNGDLTVDDGAQAIKFAQVFHLLPDRNSPGLFWVYNDLFRLNYG 131          
BLAST of Gchil6645.t1 vs. uniprot
Match: A0A6U4I285_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4I285_HEMAN)

HSP 1 Score: 137 bits (344), Expect = 3.570e-39
Identity = 68/127 (53.54%), Postives = 88/127 (69.29%), Query Frame = 0
Query:    6 EQIGKAFVNHYYNIFDTNRENLRSLYKDPSILTFEGEMCLGPDNIIQKLTNLPLQKVRHQIVSMDCQPTSAVQPNGILISVSGNLVLDNEQI---PVKFAQCFYLLPVPGESQSFWVSNDVFRLNYG 129
            E +GKAFVNHYY  FD+NR NL +LY++ S+ T+EGE  LG   I QKLT LP Q+  HQI S+DCQPTS     G+L+ V GNL ++ E     P+K++Q F L+P+PG    +WV ND+FRLNYG
Sbjct:    7 ESVGKAFVNHYYATFDSNRANLANLYQEQSMFTWEGEKFLGAAAIAQKLTTLPFQQCAHQITSIDCQPTSG---EGVLVFVCGNLKVEGEAADRPPLKYSQSFVLMPLPGGG-GYWVLNDIFRLNYG 129          
BLAST of Gchil6645.t1 vs. uniprot
Match: A0A7S0LU70_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0LU70_9CRYP)

HSP 1 Score: 139 bits (349), Expect = 4.660e-39
Identity = 67/128 (52.34%), Postives = 92/128 (71.88%), Query Frame = 0
Query:    2 NTGIEQIGKAFVNHYYNIFDTNRENLRSLYKDPSILTFEGEMCLGPDNIIQKLTNLPLQKVRHQIVSMDCQPTSAVQPNGILISVSGNLVLDNEQIPVKFAQCFYLLPVPGESQSFWVSNDVFRLNYG 129
            ++  E+IGKAFV HYYNIFDTNR  L+SLY+D S++TFEGE   G   I QKLT+LP Q V+H++++ D QPT++    G+++ V GNL +D  + P+KF+Q F L P+P   Q ++  NDVFRLNYG
Sbjct:   74 SSNFEEIGKAFVMHYYNIFDTNRAGLQSLYQDLSMMTFEGEKIQGAQAITQKLTSLPFQTVKHEVITADSQPTAS---GGVMVFVCGNLKVDGSENPMKFSQVFALQPLPN-GQGYFCYNDVFRLNYG 197          
The following BLAST results are available for this feature:
BLAST of Gchil6645.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J1E3_9FLOR3.910e-6172.00Nuclear transport factor 2 n=1 Tax=Gracilariopsis ... [more]
R7QSP7_CHOCR1.140e-4956.59Nuclear transport factor 2 n=1 Tax=Chondrus crispu... [more]
M2Y8E2_GALSU2.330e-4859.68Nuclear transport factor, putative n=1 Tax=Galdier... [more]
A0A7S0ZAF8_9RHOD7.380e-4558.87Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A5J4YZW0_PORPP1.310e-4457.26Nuclear transport factor 2 n=1 Tax=Porphyridium pu... [more]
M1V7U4_CYAM14.230e-4353.23Similar to nuclear transport factor 2 n=1 Tax=Cyan... [more]
A0A7S3AB15_9RHOD4.210e-4252.71Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7J7IQJ2_9RHOD2.310e-4053.28Nuclear transport factor 2 n=1 Tax=Cyanidiococcus ... [more]
A0A6U4I285_HEMAN3.570e-3953.54Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A7S0LU70_9CRYP4.660e-3952.34Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.450.50coord: 1..129
e-value: 1.1E-36
score: 127.7
IPR002075Nuclear transport factor 2 domainPFAMPF02136NTF2coord: 8..126
e-value: 2.2E-26
score: 92.8
IPR045875Nuclear transport factor 2/Mtr2PANTHERPTHR12612NUCLEAR TRANSPORT FACTOR 2coord: 1..128
IPR018222Nuclear transport factor 2, eukaryotePROSITEPS50177NTF2_DOMAINcoord: 8..126
score: 31.871323
IPR018222Nuclear transport factor 2, eukaryoteCDDcd00780NTF2coord: 5..128
e-value: 1.7175E-39
score: 126.628
IPR032710NTF2-like domain superfamilySUPERFAMILY54427NTF2-likecoord: 5..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004390_piloncontigtig00004390_pilon:1311820..1312435 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6645.t1Gchil6645.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004390_pilon 1311820..1312435 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6645.t1 ID=Gchil6645.t1|Name=Gchil6645.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=130bp
MNTGIEQIGKAFVNHYYNIFDTNRENLRSLYKDPSILTFEGEMCLGPDNI
IQKLTNLPLQKVRHQIVSMDCQPTSAVQPNGILISVSGNLVLDNEQIPVK
FAQCFYLLPVPGESQSFWVSNDVFRLNYG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002075NTF2_dom
IPR045875NTF2/Mtr2
IPR018222Nuclear_transport_factor_2_euk
IPR032710NTF2-like_dom_sf