Gchil6597.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6597.t1
Unique NameGchil6597.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length579
Homology
BLAST of Gchil6597.t1 vs. uniprot
Match: R7QCT6_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCT6_CHOCR)

HSP 1 Score: 123 bits (308), Expect = 1.460e-26
Identity = 129/412 (31.31%), Postives = 205/412 (49.76%), Query Frame = 0
Query:  125 LVGHLVFFSLHADFNFTEYLTWNYFALTLALLLALTCSLLDVIHDHPDQQDNESQEFPTLAEHNKADDVERQSRIATPSSQPKWLLFLTRLTVPAYQLAVSATIFGAVVFWAAVYPNATIPLTYALLAQAVAAPAIAIVDFFLSFHMNFRLIYIFLYILYNAAYVAVAYTL--TERAYIFVFLRRDASRSAFAAKAAGLAAACLFTAVLLYFITALRSLRSTRSLPDAISARSKSKRILEDRPESASRSAASSHSHHSDLSQLGL----------RRIPSNSFYDSAEF-------VHVENEDQIDQSTSLSARDRASVPI---DLGGGSSGRSSWFRASSA-RLTATLSGGS----AGEARPGFARTSSSSSVWED--MDQPAPQKEDEVFSMPACYNATKQHELARMSQV 507
            LV H+V+F+L + F+   Y TW Y  L LA + A+ CSL+ ++ +   +   E+         + AD +  Q  +    ++     F+ ++TVP YQ+ V+ ++FGAVVFWAA+ P  +  ++Y LLA    APA+A++D  LS  + FRL+Y+ L  L+NAAY    Y    T+  Y++ F+     + AF AK  GLA A +   + +Y +TA   L   R      SA  K+K+   D+ +S +   + S       SQ+ L          +R  S    DS EF         ++ + + +  +S+  R+R SVP    +L    S R  W+R+S+A RL   +S  S    A E RP         SVWE+  +D     +E E F+MPA YN  + +E+ +++ V
Sbjct:    2 LVSHMVYFTLTSAFSPRLYATWAYAGLALAFVGAVFCSLMQLLREDIVK---EAMRVDEEDGGHAADTLLGQEPVDRGLAR-----FVAQVTVPLYQVFVTVSVFGAVVFWAAILPVQSADISYPLLALNAIAPAVAVLDVLLSMSIEFRLVYVLLVALFNAAYAGTLYVFYKTDGIYVYNFINPSQEKGAFIAKTTGLAVASIVAGLFVYSVTAFSGLMFRRR-----SAEKKTKK--GDKDDSTADVKSVSDKDVELESQVTLDSSQDVQSEEKRNISAPTEDSHEFDEDEVVVADMDEKSKGNSKSSMEKRNRHSVPTQSPELARSGSNRR-WYRSSTAGRLQGVISLSSLAEEAVEDRP--------ISVWEEKGVDSAHAPQESEYFTMPAAYNGGR-NEVVKLTPV 388          
The following BLAST results are available for this feature:
BLAST of Gchil6597.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R7QCT6_CHOCR1.460e-2631.31Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 522..541
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 522..578
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 551..567
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 217..238
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 113..134
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 336..578
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 315..335
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..112
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 146..167
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 135..145
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 275..295
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 264..274
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 244..263
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 296..314
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 168..216
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 239..243
NoneNo IPR availableTMHMMTMhelixcoord: 273..295
NoneNo IPR availableTMHMMTMhelixcoord: 145..167
NoneNo IPR availableTMHMMTMhelixcoord: 217..239
NoneNo IPR availableTMHMMTMhelixcoord: 246..268
NoneNo IPR availableTMHMMTMhelixcoord: 110..132
NoneNo IPR availableTMHMMTMhelixcoord: 315..337

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004390_piloncontigtig00004390_pilon:732296..734032 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6597.t1Gchil6597.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004390_pilon 732296..734032 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6597.t1 ID=Gchil6597.t1|Name=Gchil6597.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=579bp
MPSTSTSSPPAAMLPPPRFPPTVPSKPLVVAPPLPLSHASFVEQPTAPPL
STVASSRPISSPPSLPDMIASSDSESVHSASPTTHPHLFRAPLLFQPHAF
TEASRSVCLPLSVLLLLRLFPVASLVGHLVFFSLHADFNFTEYLTWNYFA
LTLALLLALTCSLLDVIHDHPDQQDNESQEFPTLAEHNKADDVERQSRIA
TPSSQPKWLLFLTRLTVPAYQLAVSATIFGAVVFWAAVYPNATIPLTYAL
LAQAVAAPAIAIVDFFLSFHMNFRLIYIFLYILYNAAYVAVAYTLTERAY
IFVFLRRDASRSAFAAKAAGLAAACLFTAVLLYFITALRSLRSTRSLPDA
ISARSKSKRILEDRPESASRSAASSHSHHSDLSQLGLRRIPSNSFYDSAE
FVHVENEDQIDQSTSLSARDRASVPIDLGGGSSGRSSWFRASSARLTATL
SGGSAGEARPGFARTSSSSSVWEDMDQPAPQKEDEVFSMPACYNATKQHE
LARMSQVPRIDSAKQLPRLVSRQASGRFSRTSSTSSARLGPAPHLPSSAI
TASMFVRNGSAHYSTDRTNREGGGAETR*
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