Gchil6516.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil6516.t1
Unique Name	Gchil6516.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	348

Homology

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BLAST of Gchil6516.t1 vs. uniprot
Match: A0A2V3J143_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J143_9FLOR)

HSP 1 Score: 509 bits (1312), Expect = 1.550e-179
Identity = 287/348 (82.47%), Postives = 309/348 (88.79%), Query Frame = 0

Query:    1 MKFSSSAVERPRRSVPSAIPMRRRINSQPSSPDAPAYPTVTRWASAARRPTSQSDSPAARDVSYSSVALRHSNSSTDRRSTLTPSLSLPPPHTNLRPTAQRTHSLHTSPPRESIQRQATLKRSDSLLQRARRVFSLPASMRRRT-RDFAPPPDNLHRRPRTSSAAADRFENLAAADYIPRHRNSFTAAARRVTERY-RRKDSLHEDPRPTPAELTEAQHRISSLENELELERVRSSRARRRVRELEQQTVTCRHAIPAVESIIKSALAQFDAKEAALRHTITRMDQEYAALLSEKKEAVRLLNAFVGRGTRSPPPSSFSSVSDGSEGARERRALSLDAIRRAKASSAE 346
            MKFSSSAVER     PS+  MRRR+ SQPSSPD PAYPTVTRWAS ARRPTS SDSP ARDVSYSSVALRHSNSSTDRR+ +TPS+SLPP HTNLRP+AQRTHSLHT PPRESIQRQATLKRSDSLLQRARRVFSLP+S+RRRT R+F PPPDNL RRPRT+SA  DRFENLAAADYIPR RNSF AAARRVTERY RRK+ L E+  PT A+LT AQ RIS+LENELELER+RSSRARRRVRELEQQT+ CRHAIPAVE+IIKSALAQFDAKEAALRHTI+RMD EYA LL+EKKEAVRLLNAFVGRGTRSPPPSSFSSVSDGS+G +ERRA SLD IRR K S +E
Sbjct:    1 MKFSSSAVERSPNPAPSSQ-MRRRLASQPSSPDPPAYPTVTRWASTARRPTSLSDSPTARDVSYSSVALRHSNSSTDRRN-ITPSISLPPQHTNLRPSAQRTHSLHTDPPRESIQRQATLKRSDSLLQRARRVFSLPSSLRRRTTREFVPPPDNLRRRPRTTSAT-DRFENLAAADYIPRPRNSFGAAARRVTERYHRRKEPLQEEHHPTAAQLTAAQERISALENELELERIRSSRARRRVRELEQQTIACRHAIPAVETIIKSALAQFDAKEAALRHTISRMDHEYATLLAEKKEAVRLLNAFVGRGTRSPPPSSFSSVSDGSDGVKERRAYSLDTIRRGKPSFSE 345

The following BLAST results are available for this feature:

BLAST of Gchil6516.t1 vs. uniprot

BLAST of Gchil6516.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J143_9FLOR	1.550e-179	82.47	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 212..246
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..126
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 141..166
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 310..331
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..124
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 145..163

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004390_pilon	contig	tig00004390_pilon:333329..334372 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil6516.t1	Gchil6516.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004390_pilon 333329..334372 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil6516.t1 ID=Gchil6516.t1|Name=Gchil6516.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=348bp
MKFSSSAVERPRRSVPSAIPMRRRINSQPSSPDAPAYPTVTRWASAARRP
TSQSDSPAARDVSYSSVALRHSNSSTDRRSTLTPSLSLPPPHTNLRPTAQ
RTHSLHTSPPRESIQRQATLKRSDSLLQRARRVFSLPASMRRRTRDFAPP
PDNLHRRPRTSSAAADRFENLAAADYIPRHRNSFTAAARRVTERYRRKDS
LHEDPRPTPAELTEAQHRISSLENELELERVRSSRARRRVRELEQQTVTC
RHAIPAVESIIKSALAQFDAKEAALRHTITRMDQEYAALLSEKKEAVRLL
NAFVGRGTRSPPPSSFSSVSDGSEGARERRALSLDAIRRAKASSAEA*