Gchil6637.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6637.t1
Unique NameGchil6637.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length190
Homology
BLAST of Gchil6637.t1 vs. uniprot
Match: A0A2V3J052_9FLOR (Indole-3-glycerol-phosphate synthase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J052_9FLOR)

HSP 1 Score: 272 bits (696), Expect = 3.450e-88
Identity = 142/184 (77.17%), Postives = 165/184 (89.67%), Query Frame = 0
Query:    1 MGWKPSGLLREAVELKKLEVELMEATLQERPDHPINMCRSFYAHESSHRFSKALRRRDRTLSIVAAIKRFRPPPLGKTATKIADLEDIGREARALSVNGVDAAFVFTDMLQYGVETRELSKIAGLLRISNVDPGMPVARQDLVIDAVQIAEAVVAGAAAVNIVAAAALPDIMDLMNAATAMGID 184
            M WKP GLL+EAVELKK+EVELME+TL ERPDHPIN+CRSFYA +SSH FSKALRRRD TL++VAA+KRF+ P  G+TA KIADLEDI REARALS +GVDAA V+TD L++GVET EL+KIA L R+SNVDPGMP+ARQDL+IDAVQIAEA VAGA AVNIVAAAALP+IM+LMN+AT+MGI+
Sbjct:   78 MSWKPIGLLQEAVELKKIEVELMESTLSERPDHPINLCRSFYAQQSSHHFSKALRRRDGTLAVVAAMKRFQAPRPGETAVKIADLEDIAREARALSTSGVDAALVYTDSLRFGVETSELTKIARLQRVSNVDPGMPIARQDLIIDAVQIAEAAVAGATAVNIVAAAALPEIMELMNSATSMGIE 261          
BLAST of Gchil6637.t1 vs. uniprot
Match: A0A2V3ID36_9FLOR (Indole-3-glycerol-phosphate synthase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ID36_9FLOR)

HSP 1 Score: 248 bits (634), Expect = 7.690e-81
Identity = 135/183 (73.77%), Postives = 152/183 (83.06%), Query Frame = 0
Query:    2 GWKPSGLLREAVELKKLEVELMEATLQERPDHPINMCRSFYAHESSHRFSKALRRRDRTLSIVAAIKRFRPPPLGKTATKIADLEDIGREARALSVNGVDAAFVFTDMLQYGVETRELSKIAGLLRISNVDPGMPVARQDLVIDAVQIAEAVVAGAAAVNIVAAAALPDIMDLMNAATAMGID 184
            GWKPS LL EAVE KK+EV+LME+TLQERPDHPIN+C SF A E+SHR SKALRRRDR LSIVAA+KRF+PP  G+   KIADLEDIGREARA SV GVDAA V TDML YG ET ELS+ A +LR SN+D GM +AR DL+ D VQIAEA VAGAAAVNI+AAAALP IM+LM+A TAMGI+
Sbjct:   26 GWKPSRLLHEAVEPKKIEVKLMESTLQERPDHPINLCHSFNAQETSHRLSKALRRRDRRLSIVAAMKRFQPPRPGEKENKIADLEDIGREARAFSVTGVDAALVITDMLSYGFETAELSRNANVLRTSNLDLGMAIARHDLINDPVQIAEAAVAGAAAVNIIAAAALPKIMELMDAVTAMGIE 208          
BLAST of Gchil6637.t1 vs. uniprot
Match: R7QDC1_CHOCR (Indole-3-glycerol-phosphate synthase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QDC1_CHOCR)

HSP 1 Score: 210 bits (535), Expect = 2.960e-64
Identity = 112/184 (60.87%), Postives = 141/184 (76.63%), Query Frame = 0
Query:    1 MGWKPSGLLREAVELKKLEVELMEATLQERPDHPINMCRSFYAHESSHRFSKALRRRDRTLSIVAAIKRFRPPPLGKTATKIADLEDIGREARALSVNGVDAAFVFTDMLQYGVETRELSKIAGLLRISNVDPGMPVARQDLVIDAVQIAEAVVAGAAAVNIVAAAALPDIMDLMNAATAMGID 184
            M WKP GLL+EAVE++KL+VELME TL ERPDHPIN  R+FYA ++ HRFS+ALRRRD TLSIVAA+KR +P P+G+    +A+LED+  + RAL  NG DAA V+TD ++YG+   EL  IA  L+ S  D GMP+AR DL+ID VQIAEA   GA AV IVA A LPD+++L+NAATAMG++
Sbjct:   48 MVWKPQGLLQEAVEIQKLQVELMEETLTERPDHPINTRRAFYAPKTDHRFSQALRRRDGTLSIVAAVKRMQPMPVGEKPEAVAELEDLPLDTRALECNGADAALVYTDAMRYGIALTELPGIAKELKGSTTDFGMPIARHDLIIDPVQIAEAGECGACAVTIVAGAVLPDLLELLNAATAMGME 231          
BLAST of Gchil6637.t1 vs. uniprot
Match: A0A2V3IL00_9FLOR (Indole-3-glycerol-phosphate synthase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IL00_9FLOR)

HSP 1 Score: 152 bits (384), Expect = 3.810e-44
Identity = 84/118 (71.19%), Postives = 96/118 (81.36%), Query Frame = 0
Query:   67 IKRFRPPPLGKTATKIADLEDIGREARALSVNGVDAAFVFTDMLQYGVETRELSKIAGLLRISNVDPGMPVARQDLVIDAVQIAEAVVAGAAAVNIVAAAALPDIMDLMNAATAMGID 184
            +KRF+PP  G+   KIADLEDIGREARA SV GVDAA V TDML YG ET ELS+ A +LR SN+D GMP+AR DL+ID VQIAEA VAGA AVNI+AAAALP IM+LM+A TAMGI+
Sbjct:    1 MKRFQPPRPGEKENKIADLEDIGREARAFSVTGVDAALVITDMLSYGFETAELSRNANVLRTSNLDLGMPIARHDLIIDPVQIAEAAVAGAPAVNIIAAAALPKIMELMDAVTAMGIE 118          
BLAST of Gchil6637.t1 vs. uniprot
Match: A0A7W1GUB5_9BACT (Indole-3-glycerol-phosphate synthase n=1 Tax=Parachlamydiaceae bacterium TaxID=2052176 RepID=A0A7W1GUB5_9BACT)

HSP 1 Score: 68.6 bits (166), Expect = 1.540e-10
Identity = 56/181 (30.94%), Postives = 95/181 (52.49%), Query Frame = 0
Query:    4 KPSGLLREAVELKKLEVELMEATLQERPDHPINMCRSFYAHESSHRFSKALRRRDRTLSIVAAIKRFRPPPLGKTATKIADLEDIGREARALSVNGVDAAFVFTDMLQYGVETRELSKIAGLLRISNVDPGMPVARQDLVIDAVQIAEAVVAGAAAVNIVAAAALPDIMDLMNAATAMGID 184
            KP+  L + +  KK+E++ +    +   +H +NM  +   + +S RFS AL+     LS++  +KR R P LG+    I+ +ED  + A      G  A  + TD   +G    +LS +   L I    P + V R+D +I  +Q+AEAV+AGA A+ ++A     D+  L+  AT +G++
Sbjct:    2 KPADYLNKIISNKKIEIDKLIQETKSNRNHSLNMILN-QTYTTSKRFSSALK--GGKLSVIGEVKR-RSPSLGE----ISKIEDPVKLALQYCDGGASAISILTDTKHFGGSLSDLSLVKRELAIPY--PNIAVLRKDFIIHPLQLAEAVLAGADAILLIANVVRQDLKVLIQEATRLGLE 172          
BLAST of Gchil6637.t1 vs. uniprot
Match: A0A354F1F9_9GAMM (Indole-3-glycerol-phosphate synthase n=1 Tax=Legionella sp. TaxID=459 RepID=A0A354F1F9_9GAMM)

HSP 1 Score: 61.6 bits (148), Expect = 4.530e-8
Identity = 54/177 (30.51%), Postives = 89/177 (50.28%), Query Frame = 0
Query:    9 LREAVELKKLEVELMEATLQERPDHPI-NMCRSFYAHESSHRFSKALRRRDRTLSIVAAIKRFRPPPLGKTATKIADLEDIGREARALSVNGVDAAFVFTDMLQYGVETRELSKIAGLLRISNVDPGMPVARQDLVIDAVQIAEAVVAGAAAVNIVAAAALPDIMDLMNAATAMGID 184
            L   V  KK EV  +   L ++P+H + ++ +    H ++ RF++ALR    TL ++A IKR  P     +   +A + D    A+A    G  A  V TD   +     +L ++A  LR        PV R+D +ID +QIAE+++AGA A+  + A        +++AA  MG++
Sbjct:    5 LEPIVAQKKREVAALRVLLADQPEHALAHLLQGKTRHANAKRFARALR--GPTLGVIAEIKRKSP-----SKGTLALISDPPSLAQAYVAGGAHAISVLTDEPFFAGNLTDLKQVATALRGQPT----PVLRKDFIIDEIQIAESILAGADAILCIVAILGSKTKQILDAAHRMGLE 170          
BLAST of Gchil6637.t1 vs. uniprot
Match: A0A7R9YPV2_DIALT (Indole-3-glycerol-phosphate synthase n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9YPV2_DIALT)

HSP 1 Score: 60.5 bits (145), Expect = 1.820e-7
Identity = 55/187 (29.41%), Postives = 84/187 (44.92%), Query Frame = 0
Query:    4 KPSGLLREAVELKKLEVELMEATLQERPDHPINMCRSFYAHESSHRFSKALRRRDRT--LSIVAAIKRFRPPPLGKTATKIADLEDIGREARALSVNGVDAAFVFTDMLQYGVETRELSKIAGLLRISNVDPGMPVA----RQDLVIDAVQIAEAVVAGAAAVNIVAAAALPDIMDLMNAATAMGID 184
            +P G L +    K  EV  +    + R D P++M   + A E+   FS A+R       L +   +KR      G          D+  EA  L   GVDA  V     +YG    +L  +A +LR        P+A     +D V+  +QIA+ + AGA+AV +V     PD+  L+N+ T MG++
Sbjct:   74 QPEGALAQIQAEKLDEVGAIMRLPEARDDGPLSMRLGYMAPETICSFSDAIRASSSQGRLGVAVDLKRSTVDASGVVMELRDPSSDLNAEASYLLSIGVDALIVSCGATRYGSSLSDLDMLAQVLRGQPTPGARPIAPPLLAKDFVVHPIQIAQMLEAGASAVLLVCGLVGPDLEQLLNSCTLMGVE 260          
The following BLAST results are available for this feature:
BLAST of Gchil6637.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A2V3J052_9FLOR3.450e-8877.17Indole-3-glycerol-phosphate synthase n=1 Tax=Graci... [more]
A0A2V3ID36_9FLOR7.690e-8173.77Indole-3-glycerol-phosphate synthase n=1 Tax=Graci... [more]
R7QDC1_CHOCR2.960e-6460.87Indole-3-glycerol-phosphate synthase n=1 Tax=Chond... [more]
A0A2V3IL00_9FLOR3.810e-4471.19Indole-3-glycerol-phosphate synthase n=1 Tax=Graci... [more]
A0A7W1GUB5_9BACT1.540e-1030.94Indole-3-glycerol-phosphate synthase n=1 Tax=Parac... [more]
A0A354F1F9_9GAMM4.530e-830.51Indole-3-glycerol-phosphate synthase n=1 Tax=Legio... [more]
A0A7R9YPV2_DIALT1.820e-729.41Indole-3-glycerol-phosphate synthase n=2 Tax=Diacr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 8..28
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70Aldolase class Icoord: 6..185
e-value: 2.6E-18
score: 68.1
IPR013798Indole-3-glycerol phosphate synthase domainPFAMPF00218IGPScoord: 40..184
e-value: 2.2E-7
score: 30.3
IPR011060Ribulose-phosphate binding barrelSUPERFAMILY51366Ribulose-phoshate binding barrelcoord: 6..184

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004390_piloncontigtig00004390_pilon:1170880..1171562 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6637.t1Gchil6637.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004390_pilon 1170880..1171562 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6637.t1 ID=Gchil6637.t1|Name=Gchil6637.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=190bp
MGWKPSGLLREAVELKKLEVELMEATLQERPDHPINMCRSFYAHESSHRF
SKALRRRDRTLSIVAAIKRFRPPPLGKTATKIADLEDIGREARALSVNGV
DAAFVFTDMLQYGVETRELSKIAGLLRISNVDPGMPVARQDLVIDAVQIA
EAVVAGAAAVNIVAAAALPDIMDLMNAATAMGIDRGKVD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013785Aldolase_TIM
IPR013798Indole-3-glycerol_P_synth_dom
IPR011060RibuloseP-bd_barrel