Gchil6540.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6540.t1
Unique NameGchil6540.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length293
Homology
BLAST of Gchil6540.t1 vs. uniprot
Match: A0A2V3J116_9FLOR (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J116_9FLOR)

HSP 1 Score: 402 bits (1033), Expect = 1.510e-139
Identity = 184/248 (74.19%), Postives = 213/248 (85.89%), Query Frame = 0
Query:   43 MQTTFVQSVPFTVRPLRRAISPLSPRKHFVLAAMGPFVWFQNLVRATSTAKSMTATPIAPPSKHVVLSTPIAPPPGGWEPPLQEAMFGLGCFWGAERKFWQTEGVYTTSVGYAGGETEFPTYRQVCSGRTGHAEVVNLVYDTSKTSYEDVLNVFWETHDPTQKNRQGNDVGTQYRSVIYYYNEEQRKAAEETRNHFNTILKEAGRNGIATEIQPAPQYFYAEEYHQQYLHKNPMGYCGLGGTGLYKPR 290
            M++ FVQ +P + R + RAISPL PR     AAMGP  W Q+L+R T+   SM  TPIAPP+KH VL  P+APPPGGW+ PLQEAMFGLGCFWGAERKFWQ +GV+TTSVGYAGG T+ PTYR+VCSGRTGHAEVVN+V+D+SKTSYED++NVFWE+HDPTQKNRQGNDVGTQYRSVIYYYN+EQ++ AE TR+HFN +LKEAGR+ IATEIQ AP+Y+YAEEYHQQYLHKNP GYCGLGGTGLY PR
Sbjct:    1 MRSAFVQPLPLSTRSVHRAISPLRPRTTVPRAAMGPIDWLQSLIRPTT---SMATTPIAPPTKHTVLGNPVAPPPGGWQAPLQEAMFGLGCFWGAERKFWQKDGVHTTSVGYAGGTTDLPTYREVCSGRTGHAEVVNVVFDSSKTSYEDIINVFWESHDPTQKNRQGNDVGTQYRSVIYYYNDEQKRVAEATRDHFNRLLKEAGRSAIATEIQAAPKYYYAEEYHQQYLHKNPFGYCGLGGTGLYSPR 245          
BLAST of Gchil6540.t1 vs. uniprot
Match: R7QA15_CHOCR (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QA15_CHOCR)

HSP 1 Score: 315 bits (808), Expect = 8.820e-106
Identity = 142/193 (73.58%), Postives = 165/193 (85.49%), Query Frame = 0
Query:   99 PIAPPSKHVVLSTPIAPPPGGWEPPLQEAMFGLGCFWGAERKFWQTEGVYTTSVGYAGGETEFPTYRQVCSGRTGHAEVVNLVYDTSKTSYEDVLNVFWETHDPTQKNRQGNDVGTQYRSVIYYYNEEQRKAAEETRNHFNTILKEAGRNGIATEIQPAPQYFYAEEYHQQYLHKNPMGYCGLGGTGLYKPRK 291
            PIAPP KHVVL T  A P GGW+PPL++A+FGLGCFWGAERKFW   GV+TTSVGYAGG    P YR VCSGRTGHAEVVN+V+D SKTS+ED+L++FW+ HDPT KNRQGNDVG+QYRS I+YYN+ QRK AE+TR+HFN +LKEAGRN   TEI+PA +Y++AEEYHQQYLHKNP GYCGLGGTGLY+P K
Sbjct:   20 PIAPPEKHVVLGTSPAQPEGGWKPPLEQAIFGLGCFWGAERKFWTAPGVHTTSVGYAGGMVPNPRYRPVCSGRTGHAEVVNVVFDQSKTSFEDMLDIFWDAHDPTTKNRQGNDVGSQYRSAIFYYNDAQRKLAEQTRDHFNDLLKEAGRNACTTEIKPAGKYYFAEEYHQQYLHKNPTGYCGLGGTGLYRPLK 212          
BLAST of Gchil6540.t1 vs. uniprot
Match: M2VY06_GALSU (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VY06_GALSU)

HSP 1 Score: 261 bits (666), Expect = 3.630e-84
Identity = 124/211 (58.77%), Postives = 152/211 (72.04%), Query Frame = 0
Query:   82 FQNLVRATSTAKSMTATPIAPPSKHVVLSTPIAPPPGGWEPPLQEAMFGLGCFWGAERKFWQTEGVYTTSVGYAGGETEFPTYRQVCSGRTGHAEVVNLVYDTSKTSYEDVLNVFWETHDPTQKNRQGNDVGTQYRSVIYYYNEEQRKAAEETRNHFNTILKEAGRNGIATEIQPAPQYFYAEEYHQQYLHKNPMGYCGLGGTGLYKPRKN 292
            F+ + + T          I P  KH VL TP++      E   Q A+FGLGCFWGAERKFWQT+GVY+T+VGYAGG T+ PTY  VC+ RTGHAEVV +VYD  KTSYE +L+VFW  HDPTQ NRQGND GTQYRSVI+YY++ Q+  AEET+ HF  +L + G   I TEI PA  +++AE+YHQQYL KNP GYCGLGGTG Y+PR++
Sbjct:    8 FEKIGKRTGYEPPDREEAIIPSEKHYVLGTPLSA--NFEEMGFQYALFGLGCFWGAERKFWQTKGVYSTAVGYAGGRTKNPTYEDVCTDRTGHAEVVRVVYDPKKTSYEQLLDVFWANHDPTQLNRQGNDRGTQYRSVIFYYDDVQKNCAEETKRHFQEVLAKKGYGNIVTEIVPASVFYFAEDYHQQYLAKNPNGYCGLGGTGCYEPRQD 216          
BLAST of Gchil6540.t1 vs. uniprot
Match: A0A7W7ZXC1_9ACTN (Peptide methionine sulfoxide reductase MsrA n=2 Tax=Nonomuraea TaxID=83681 RepID=A0A7W7ZXC1_9ACTN)

HSP 1 Score: 257 bits (656), Expect = 1.150e-82
Identity = 120/188 (63.83%), Postives = 146/188 (77.66%), Query Frame = 0
Query:  103 PSKHVVLSTPIAPP-PGGWEPPLQEAMFGLGCFWGAERKFWQTEGVYTTSVGYAGGETEFPTYRQVCSGRTGHAEVVNLVYDTSKTSYEDVLNVFWETHDPTQKNRQGNDVGTQYRSVIYYYNEEQRKAAEETRNHFNTILKEAGRNGIATEIQPAPQYFYAEEYHQQYLHKNPMGYCGLGGTGLYKP 289
            PS+H VL  P+APP P G    L+ A FGLGCFWGAERKFWQTEGVYTT+VGY GG TE PTY +VC+G TGH E V +VYD +K SYE++L VFWE HDPTQ  RQGNDVGTQYRS IYY++ EQ K+A  +R+ +  +LK +G + I TEI PAP++F+AE+YHQQYLH+N  GYCG+GGTG+  P
Sbjct:   29 PSRHAVLDAPLAPPYPEG----LEIADFGLGCFWGAERKFWQTEGVYTTAVGYQGGYTENPTYEEVCTGATGHTEAVRVVYDPAKVSYEELLKVFWENHDPTQGMRQGNDVGTQYRSAIYYHSPEQEKSALASRDAYQAVLKSSGYDEITTEIAPAPEFFFAEDYHQQYLHRNKNGYCGIGGTGVACP 212          
BLAST of Gchil6540.t1 vs. uniprot
Match: A0A7Y5WV21_9BACT (Peptide methionine sulfoxide reductase MsrA n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7Y5WV21_9BACT)

HSP 1 Score: 255 bits (652), Expect = 5.140e-82
Identity = 123/188 (65.43%), Postives = 143/188 (76.06%), Query Frame = 0
Query:  103 PSKHVVLSTPIAPP-PGGWEPPLQEAMFGLGCFWGAERKFWQTEGVYTTSVGYAGGETEFPTYRQVCSGRTGHAEVVNLVYDTSKTSYEDVLNVFWETHDPTQKNRQGNDVGTQYRSVIYYYNEEQRKAAEETRNHFNTILKEAGRNGIATEIQPAPQYFYAEEYHQQYLHKNPMGYCGLGGTGLYKP 289
            P++H VL  P+  P P G    LQ AMFGLGCFWGAERKFWQ  GVYTT+VGYA G T  PTYR+VCSG TGH+EVV +V+D  + SYED+L VFWE+HDPTQ  RQGNDVGTQYRS IYYY+E QR AAE T + +   L +AG   I TEI PAP+++YAE+YHQQYL KNP GYCGLGGTG+  P
Sbjct:   25 PARHHVLEAPLQGPFPAG----LQTAMFGLGCFWGAERKFWQVPGVYTTAVGYAAGLTPNPTYREVCSGMTGHSEVVLVVFDPKRVSYEDLLKVFWESHDPTQGMRQGNDVGTQYRSGIYYYDEAQRAAAERTHDEYQQALSKAGHGTITTEILPAPEFYYAEDYHQQYLSKNPNGYCGLGGTGVTCP 208          
BLAST of Gchil6540.t1 vs. uniprot
Match: A0A2T4VU67_VITXG (Peptide methionine sulfoxide reductase MsrA n=1 Tax=Vitiosangium sp. (strain GDMCC 1.1324) TaxID=2138576 RepID=A0A2T4VU67_VITXG)

HSP 1 Score: 254 bits (648), Expect = 1.820e-81
Identity = 122/188 (64.89%), Postives = 145/188 (77.13%), Query Frame = 0
Query:  103 PSKHVVLSTPI-APPPGGWEPPLQEAMFGLGCFWGAERKFWQTEGVYTTSVGYAGGETEFPTYRQVCSGRTGHAEVVNLVYDTSKTSYEDVLNVFWETHDPTQKNRQGNDVGTQYRSVIYYYNEEQRKAAEETRNHFNTILKEAGRNGIATEIQPAPQYFYAEEYHQQYLHKNPMGYCGLGGTGLYKP 289
            P KH V   P+ AP P G    LQ+A+FGLGCFWGAERKFWQT GVY+TSVGYAGG T  PTY +VCSGRTGH EVV++VYD  + SYE +L VFWE HDPTQ  RQGNDVGTQYRS IY+ N+ QRKAAE +R+ +  +L +AG   I TE++ AP+Y+YAE+YHQQYL KNP GYCG+GGTG+  P
Sbjct:   29 PKKHYVNGAPLEAPFPEG----LQQAIFGLGCFWGAERKFWQTPGVYSTSVGYAGGLTPNPTYEEVCSGRTGHTEVVSVVYDPKQVSYETLLKVFWENHDPTQGMRQGNDVGTQYRSAIYWTNDAQRKAAEASRDAYQQVLTKAGYGPITTELRQAPEYYYAEDYHQQYLAKNPNGYCGIGGTGVSCP 212          
BLAST of Gchil6540.t1 vs. uniprot
Match: A0A2V7X937_9BACT (Peptide methionine sulfoxide reductase MsrA n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V7X937_9BACT)

HSP 1 Score: 253 bits (646), Expect = 3.190e-81
Identity = 121/190 (63.68%), Postives = 144/190 (75.79%), Query Frame = 0
Query:  100 IAPPSKHVVLSTPIAPPPGGWEPPLQEAMFGLGCFWGAERKFWQTEGVYTTSVGYAGGETEFPTYRQVCSGRTGHAEVVNLVYDTSKTSYEDVLNVFWETHDPTQKNRQGNDVGTQYRSVIYYYNEEQRKAAEETRNHFNTILKEAGRNGIATEIQPAPQYFYAEEYHQQYLHKNPMGYCGLGGTGLYKP 289
            +A P++H V   P+   P G    LQEA+FG+GCFWGAE+ FW T GV +TSVGYAGG T  PTYR+VCSGRTGHAEVV +V+D S+  YED+L VFWE HDPTQ  RQGNDVGTQYRS IY Y +EQR+AAE +R+ +  +L+ AG   I TEI PAP+Y++AEEYHQQYL KNP GYCG GGTGL  P
Sbjct:   22 MAVPARHFVSGAPLEGLPAG----LQEAVFGMGCFWGAEKGFWLTPGVVSTSVGYAGGTTPNPTYREVCSGRTGHAEVVRVVFDPSRVRYEDLLRVFWEGHDPTQGMRQGNDVGTQYRSAIYTYGDEQRRAAESSRDAYEKVLRAAGFGAITTEIAPAPEYYFAEEYHQQYLAKNPDGYCGHGGTGLSCP 207          
BLAST of Gchil6540.t1 vs. uniprot
Match: A0A2V7TY64_9BACT (Peptide methionine sulfoxide reductase MsrA n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V7TY64_9BACT)

HSP 1 Score: 253 bits (646), Expect = 5.620e-81
Identity = 121/185 (65.41%), Postives = 143/185 (77.30%), Query Frame = 0
Query:  103 PSKHVVLSTPIAPP-PGGWEPPLQEAMFGLGCFWGAERKFWQTEGVYTTSVGYAGGETEFPTYRQVCSGRTGHAEVVNLVYDTSKTSYEDVLNVFWETHDPTQKNRQGNDVGTQYRSVIYYYNEEQRKAAEETRNHFNTILKEAGRNGIATEIQPAPQYFYAEEYHQQYLHKNPMGYCGLGGTGL 286
            P++H VL  P++PP P G E     A+F LGCFWGAERKFWQT GV +TSVGYAGG T  PTYR+VCSGRTGHAEVV +V+D  K  YED+L VFWE+HDPTQ  RQGNDVGTQYRS IY+ +EEQR AA  +R+ +   L+ +G   I TEI PAP+++YAEEYHQQYL KNP GYCGLGGTG+
Sbjct:   29 PARHTVLGAPLSPPFPAGTE----TALFALGCFWGAERKFWQTPGVVSTSVGYAGGFTPNPTYREVCSGRTGHAEVVRVVFDLRKVRYEDLLRVFWESHDPTQGMRQGNDVGTQYRSAIYWTSEEQRNAAVASRDAYQRALRGSGHGEITTEIAPAPEFYYAEEYHQQYLDKNPGGYCGLGGTGV 209          
BLAST of Gchil6540.t1 vs. uniprot
Match: A0A2V7URG7_9BACT (Peptide methionine sulfoxide reductase MsrA n=2 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V7URG7_9BACT)

HSP 1 Score: 251 bits (642), Expect = 1.430e-80
Identity = 120/188 (63.83%), Postives = 144/188 (76.60%), Query Frame = 0
Query:  103 PSKHVVLSTPIAPP-PGGWEPPLQEAMFGLGCFWGAERKFWQTEGVYTTSVGYAGGETEFPTYRQVCSGRTGHAEVVNLVYDTSKTSYEDVLNVFWETHDPTQKNRQGNDVGTQYRSVIYYYNEEQRKAAEETRNHFNTILKEAGRNGIATEIQPAPQYFYAEEYHQQYLHKNPMGYCGLGGTGLYKP 289
            P++H VL T + PP P G     + A+FGLGCFWGAERKFWQT GV +T+VGYAGG T  PTYR+VCSG TGHAEVV +++D  K  YED+L VFWE+HDPTQ  RQGNDVGTQYRS IY+++EEQR+AAE +R  +   L+ AG+  I TEI P P ++YAEEYHQQYL KNP GYCGLGGTG+  P
Sbjct:   27 PARHFVLGTALKPPFPEG----TRTALFGLGCFWGAERKFWQTAGVISTAVGYAGGVTPNPTYREVCSGLTGHAEVVRVLFDPDKVRYEDLLRVFWESHDPTQGMRQGNDVGTQYRSAIYWHDEEQRRAAEASREAYQAALRAAGQGEITTEIAPEPDFYYAEEYHQQYLAKNPGGYCGLGGTGVSCP 210          
BLAST of Gchil6540.t1 vs. uniprot
Match: A0A0G2ZSD2_9DELT (Peptide methionine sulfoxide reductase MsrA n=5 Tax=Archangium TaxID=47 RepID=A0A0G2ZSD2_9DELT)

HSP 1 Score: 251 bits (640), Expect = 2.960e-80
Identity = 123/194 (63.40%), Postives = 144/194 (74.23%), Query Frame = 0
Query:   97 ATPIAPPSKHVVLSTPI-APPPGGWEPPLQEAMFGLGCFWGAERKFWQTEGVYTTSVGYAGGETEFPTYRQVCSGRTGHAEVVNLVYDTSKTSYEDVLNVFWETHDPTQKNRQGNDVGTQYRSVIYYYNEEQRKAAEETRNHFNTILKEAGRNGIATEIQPAPQYFYAEEYHQQYLHKNPMGYCGLGGTGLYKP 289
            +T +A P KH V   P+ AP P G E    +A+FGLGCFWGAERKFWQT GVY+TSVGYAGG T  PTY +VCSGRTGH EVV +VYD  K S+E +L VFWE HDPTQ  RQGNDVGTQYRS IY+  E QRKA E +R  +  +L  AG   I TE++PAP+Y+YAE+YHQQYL KNP GYCG+GGTG+  P
Sbjct:   23 STRMAVPKKHHVNGAPLEAPFPEGME----QAIFGLGCFWGAERKFWQTPGVYSTSVGYAGGITPNPTYEEVCSGRTGHTEVVLVVYDPKKVSFETLLKVFWENHDPTQGMRQGNDVGTQYRSAIYWTTEAQRKAVEASREAYQKVLTAAGYEPITTELRPAPEYYYAEDYHQQYLAKNPNGYCGIGGTGVSCP 212          
The following BLAST results are available for this feature:
BLAST of Gchil6540.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J116_9FLOR1.510e-13974.19Peptide-methionine (S)-S-oxide reductase n=1 Tax=G... [more]
R7QA15_CHOCR8.820e-10673.58Peptide-methionine (S)-S-oxide reductase n=1 Tax=C... [more]
M2VY06_GALSU3.630e-8458.77Peptide-methionine (S)-S-oxide reductase n=1 Tax=G... [more]
A0A7W7ZXC1_9ACTN1.150e-8263.83Peptide methionine sulfoxide reductase MsrA n=2 Ta... [more]
A0A7Y5WV21_9BACT5.140e-8265.43Peptide methionine sulfoxide reductase MsrA n=1 Ta... [more]
A0A2T4VU67_VITXG1.820e-8164.89Peptide methionine sulfoxide reductase MsrA n=1 Ta... [more]
A0A2V7X937_9BACT3.190e-8163.68Peptide methionine sulfoxide reductase MsrA n=1 Ta... [more]
A0A2V7TY64_9BACT5.620e-8165.41Peptide methionine sulfoxide reductase MsrA n=1 Ta... [more]
A0A2V7URG7_9BACT1.430e-8063.83Peptide methionine sulfoxide reductase MsrA n=2 Ta... [more]
A0A0G2ZSD2_9DELT2.960e-8063.40Peptide methionine sulfoxide reductase MsrA n=5 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002569Peptide methionine sulphoxide reductase MsrA domainTIGRFAMTIGR00401TIGR00401coord: 126..279
e-value: 6.8E-64
score: 212.8
IPR002569Peptide methionine sulphoxide reductase MsrA domainPFAMPF01625PMSRcoord: 127..279
e-value: 1.1E-64
score: 217.2
IPR002569Peptide methionine sulphoxide reductase MsrA domainHAMAPMF_01401MsrAcoord: 124..285
score: 38.051762
IPR036509Peptide methionine sulphoxide reductase MsrA superfamilyGENE3D3.30.1060.10Peptide methionine sulphoxide reductase MsrAcoord: 82..291
e-value: 7.3E-84
score: 282.3
IPR036509Peptide methionine sulphoxide reductase MsrA superfamilySUPERFAMILY55068Peptide methionine sulfoxide reductasecoord: 88..289
NoneNo IPR availablePANTHERPTHR42799MITOCHONDRIAL PEPTIDE METHIONINE SULFOXIDE REDUCTASEcoord: 112..285
NoneNo IPR availablePANTHERPTHR42799:SF2MITOCHONDRIAL PEPTIDE METHIONINE SULFOXIDE REDUCTASEcoord: 112..285

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004390_piloncontigtig00004390_pilon:432253..433521 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6540.t1Gchil6540.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004390_pilon 432253..433521 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6540.t1 ID=Gchil6540.t1|Name=Gchil6540.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=293bp
MSGSYAIHRISQVVFPSRELPPHSLNVELTASTASRVHFVYMMQTTFVQS
VPFTVRPLRRAISPLSPRKHFVLAAMGPFVWFQNLVRATSTAKSMTATPI
APPSKHVVLSTPIAPPPGGWEPPLQEAMFGLGCFWGAERKFWQTEGVYTT
SVGYAGGETEFPTYRQVCSGRTGHAEVVNLVYDTSKTSYEDVLNVFWETH
DPTQKNRQGNDVGTQYRSVIYYYNEEQRKAAEETRNHFNTILKEAGRNGI
ATEIQPAPQYFYAEEYHQQYLHKNPMGYCGLGGTGLYKPRKN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002569Met_Sox_Rdtase_MsrA_dom
IPR036509Met_Sox_Rdtase_MsrA_sf