Gchil6503.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6503.t1
Unique NameGchil6503.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length346
Homology
BLAST of Gchil6503.t1 vs. uniprot
Match: A0A2V3IY57_9FLOR (Warthog protein 8 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IY57_9FLOR)

HSP 1 Score: 436 bits (1120), Expect = 2.270e-150
Identity = 214/330 (64.85%), Postives = 258/330 (78.18%), Query Frame = 0
Query:    6 FSWLLAYVVLARAGFNVDNLNDGSLTRRQVEGSSCPRKIEFNTNKNEIGAGDIQMEDKDCKGNGIITVRTLGASAPNTSSAAVKYFSGRNEDVGGFLAGTIEGGNIECEAYSLKEGEELIFLKPDDDVEDVEWENVFGGATPLSRDDDDDFELDDNDRFLIISNRCFYSETELLDRVCFPADAEVRMHGGSLRRMDQLSIGDHVQTSQESFSSVFAWTHADAHTKYRFVQLDTKSRSISLTASHYIYADGVTMAAGKVKVGMKLLLSDGSFESVTNKKTVWKTGLYNPQTLDGDIVVNGVVATTYTTAIELKTAHALLAPVRAAFSVLKN 335
            F  L A    A A FN   LND SLTRRQ++G+SCPRKIEFNTNK E GA DI MEDK C+GNG++ +R+ GAS  +  S  ++YF+GRN DVG FLAG++ GGNI CEAY+L +G+ L+FL+P+DDVEDV+W+ VFG  TPLSRD    FE+DD+DR+LI+S+RCF+SETE+ DRVCFPADA VR+  GS+R + QLSIGDHVQ S   FS VFAWTHADAHTKYRFVQL T S SI+LT SHYIYAD V   A  V +GMKL L DGS + V  KK VWKTGLYNPQT+DGDIVV+G+VATTYTTA+++  AHALLAP+RAAF  +K+
Sbjct:    7 FVALAALFTAAFASFNAATLNDVSLTRRQIDGASCPRKIEFNTNKLEFGARDIDMEDKKCEGNGLVRLRSFGASVASNESKPIRYFAGRNRDVGSFLAGSVVGGNIVCEAYNLSQGDTLLFLRPNDDVEDVKWKEVFGEETPLSRDRSRSFEMDDDDRYLIVSDRCFFSETEIFDRVCFPADASVRLQDGSVRTVSQLSIGDHVQVSHAKFSPVFAWTHADAHTKYRFVQLSTPSTSITLTPSHYIYADDVIRPAKSVTLGMKLRLHDGSQQQVIGKKYVWKTGLYNPQTVDGDIVVDGIVATTYTTAVQINAAHALLAPLRAAFLAVKS 336          
BLAST of Gchil6503.t1 vs. uniprot
Match: R7Q8Q4_CHOCR (HintN domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q8Q4_CHOCR)

HSP 1 Score: 203 bits (517), Expect = 2.370e-59
Identity = 116/338 (34.32%), Postives = 192/338 (56.80%), Query Frame = 0
Query:   11 AYVVLARAGFNVDNLNDGSLTRRQVEGSSCPRKIEFNTNKNEIGAGDIQMEDKDCKGNGIITVRTLGASAPNTSSAAVKYFSGRNEDVGGFLAGTIEGGNIECEAYSLKEGEELIFLKPDDDVEDVEWENVFGGATPLSRDDDDD-FELDDNDRFLIISNRCFYSETELLDRV-CFPADAEVRMHGGSLRRMDQLSIGDHVQTSQESFSSVFAWTHADAHTKYRFVQLDTK-SRSISLTASHYIYADGVTMAAGKVKVGMKLLLSDGSFESVTNKKTVWKTGLYNPQTLDGDIVVNGVVATTYTTAIELKTAHALLAPVRAAFSVLKNAMGISAKASL 345
            A   + RA F  +++ D    R   E   C  K+ F  N   I   +I ++D  C+G  I       A     ++    +F   +  VG FLAG +    I C+  SL     ++ ++PDD+++DV + ++    + ++ + D+D ++ +++ +++ + N+CFY+ET + DRV CFPADA V +  G ++ MD + IGD V  +  ++S VFAWTH  + +   ++ ++T     +  TA HY++ADG T+    V+ GM +  ++G+  +VT  +TV   GLYNPQT  GDIVVNG++ATTYT A++   AHALLAPVRAA+ +++ A+ +     L
Sbjct:   11 ALFAVVRADFTKEDIQDDYSLRAGSE-KECVDKLRFEGNDLVITPDNISLQDAKCEGGNINL-----ADDGEITNQVTAFFEKNSGTVGSFLAGPV-ASEIRCDTNSLAAETVVVLVRPDDELDDVPFTDIVSEDSGIATNTDNDKWDFEEDRKYIFLGNKCFYAETNIGDRVECFPADATVTLQSGQVKTMDTVRIGDRVLVADGTYSDVFAWTHHTSKSALSYIAVETDLGNRLVTTAGHYVHADGATLQMRDVRKGMVMRTAEGADATVTAVRTVKAKGLYNPQTTHGDIVVNGLIATTYTDAVQPGAAHALLAPVRAAYKMVRAALPLGQSVEL 341          
BLAST of Gchil6503.t1 vs. uniprot
Match: R7Q619_CHOCR (HintN domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q619_CHOCR)

HSP 1 Score: 146 bits (369), Expect = 1.580e-38
Identity = 77/153 (50.33%), Postives = 101/153 (66.01%), Query Frame = 0
Query:  180 DRVCFPADAEVRMHGGSLRRMDQLSIGDHVQTSQESFSSVFAWTHADAHTKYRFVQLDTKS-RSISLTASHYIYADGVTMAAGKVKVGMKLLLSDGSFESVTNKKTVWKTGLYNPQTLDGDIVVNGVVATTYTTAIELKTAHALLAPVRAAFS 331
            D VCFPA+A V +  G+ + M Q+ +GD V+     FS VF +TH  A  KY FV L T+S  ++SLT  HY+Y +GV  AA  V+ G  + L+DG+  SVT   T    GLYNPQT+ GDI+VNG++ATTYTT +E   AHALLAP+RA +S
Sbjct:   66 DSVCFPANALVELENGATKMMSQVQLGDRVRVGPNDFSDVFMFTHKTAAIKYSFVTLATQSGHTLSLTKGHYLYVNGVVAAAKTVRSGDFITLADGTTSSVTQVGTEIARGLYNPQTVHGDIIVNGLLATTYTTTVERSMAHALLAPLRAVYS 218          
BLAST of Gchil6503.t1 vs. uniprot
Match: A0A2V3IX71_9FLOR (Indian hedgehog B protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX71_9FLOR)

HSP 1 Score: 147 bits (370), Expect = 1.760e-36
Identity = 78/153 (50.98%), Postives = 101/153 (66.01%), Query Frame = 0
Query:  180 DRVCFPADAEVRMHGGSLRRMDQLSIGDHVQTSQESFSSVFAWTHADAHTKYRFVQLDTKS-RSISLTASHYIYADGVTMAAGKVKVGMKLLLSDGSFESVTNKKTVWKTGLYNPQTLDGDIVVNGVVATTYTTAIELKTAHALLAPVRAAFS 331
            D VCFPADA V++  GS ++M  + +GD V      FS VF +TH  +  +Y FV + T S  ++SLT  HY+Y +G   AA  VK G  L+L+D S   VT   TV  TGL+NPQTL GDIVVNG+ A+TYTTA+E   AHALL+P+RAA+S
Sbjct:  307 DAVCFPADATVQLEDGSAKKMGDVQLGDRVMVDHGIFSPVFMFTHKLSTVRYGFVNIQTSSGNTLSLTPGHYLYVNGHLSAASTVKNGDTLMLADSSLTDVTQVSTVTSTGLFNPQTLHGDIVVNGLKASTYTTAVEPGLAHALLSPLRAAYS 459          
BLAST of Gchil6503.t1 vs. uniprot
Match: A0A2V3J2J0_9FLOR (Temptin n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2J0_9FLOR)

HSP 1 Score: 142 bits (358), Expect = 1.730e-35
Identity = 75/150 (50.00%), Postives = 98/150 (65.33%), Query Frame = 0
Query:  180 DRVCFPADAEVRMHGGSLRRMDQLSIGDHVQTSQESFSSVFAWTHADAHTKYRFVQLDT-KSRSISLTASHYIYADGVTMAAGKVKVGMKLLLSDGSFESVTNKKTVWKTGLYNPQTLDGDIVVNGVVATTYTTAIELKTAHALLAPVRA 328
            D VCFPA A+VR+  GS+RRMDQL IGD V      +S +F +TH  A  +Y FV + T K  S++LT+ H++YA+  ++ A  V+VG  + L DGS   VT        GLYNPQTL GD++VNGV  TTYT+AI L  AH+LL P+RA
Sbjct:  211 DNVCFPAHAQVRLEDGSVRRMDQLQIGDRVHVGNGIYSPIFMFTHQHARIRYPFVIIQTDKQHSLTLTSGHFMYANDASVRASAVRVGDYVQLEDGSKSLVTAVSKHISNGLYNPQTLHGDLIVNGVRVTTYTSAIHLTLAHSLLTPLRA 360          
BLAST of Gchil6503.t1 vs. uniprot
Match: A0A1X6P3Z4_PORUM (HintN domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P3Z4_PORUM)

HSP 1 Score: 140 bits (352), Expect = 1.220e-34
Identity = 81/166 (48.80%), Postives = 110/166 (66.27%), Query Frame = 0
Query:  180 DRVCFPADAEVRMHGGSLRRMDQLSIGDHVQTSQESFSSVFAWTHADAHTKYRFVQLDTKS-RSISLTASHYIYADGVTMAAGKVKVGMKL-LLSDGSFESVTNKKTVWKTGLYNPQTLDGDIVVNGVVATTYTTAIELKTAHALLAPVRAAFSVLKNAMGISAKA 343
            D VCFPA A+V +  G    MDQL++GD+V+ S ++FS VF +TH  A   + FV+L T S  S+++T SHY+YA+G   AAG VK+G +L L+     + +T    V +TGLYNPQTL GDI VNG+ A+T+TTA+E + A ALLAP+RA F     A G+S  A
Sbjct:  205 DDVCFPASAQVELDTGRTVTMDQLAVGDNVRVSADAFSRVFLFTHKVAAGSFPFVKLTTASGASLTVTRSHYVYANGKMTAAGAVKLGDELELVGAAKCDIITATSPVTETGLYNPQTLHGDIFVNGIRASTFTTAVEPRVASALLAPLRALF----RATGVSTSA 366          
BLAST of Gchil6503.t1 vs. uniprot
Match: A0A1X6P3Y5_PORUM (HintN domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P3Y5_PORUM)

HSP 1 Score: 143 bits (361), Expect = 1.230e-34
Identity = 83/163 (50.92%), Postives = 110/163 (67.48%), Query Frame = 0
Query:  180 DRVCFPADAEVRMHGGSLRRMDQLSIGDHVQTSQESFSSVFAWTHADAHTKYRFVQLDTKSR-SISLTASHYIYADGVTMAAGKVKVGMKL-LLSDGSFESVTNKKTVWKTGLYNPQTLDGDIVVNGVVATTYTTAIELKTAHALLAPVRAAFSVLKNAMGIS 340
            D VCFPA AEV +  G    MDQL++GD+V+ S ++FS VF +TH  A   + FV+L T S  S+++T SHY+YA+G   AAG VK+G KL L+     + VT    + +TGLYNPQTL GDIVVNG+ A+T+TTA+E + A ALLAP+RA F     A G+S
Sbjct:  426 DSVCFPASAEVELDTGRTVTMDQLAVGDNVRVSADAFSRVFLFTHKIATGSFGFVKLTTASAASLTVTRSHYVYANGKMTAAGAVKLGDKLELVGAAKCDIVTAISPITETGLYNPQTLHGDIVVNGIRASTFTTAVEPRVASALLAPLRALF----RATGVS 584          
BLAST of Gchil6503.t1 vs. uniprot
Match: A0A1X6P3R7_PORUM (HintN domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P3R7_PORUM)

HSP 1 Score: 144 bits (362), Expect = 1.390e-34
Identity = 83/166 (50.00%), Postives = 111/166 (66.87%), Query Frame = 0
Query:  180 DRVCFPADAEVRMHGGSLRRMDQLSIGDHVQTSQESFSSVFAWTHADAHTKYRFVQLDTKS-RSISLTASHYIYADGVTMAAGKVKVGMKL-LLSDGSFESVTNKKTVWKTGLYNPQTLDGDIVVNGVVATTYTTAIELKTAHALLAPVRAAFSVLKNAMGISAKA 343
            D VCFPA AEV +  G    MDQL++GD+V+ + ++FS VF +TH  A   + FV+L T S  S+++T SHY+YA+G   AAG VK+G KL L+     + +T    V +TGLYNPQTL GDIVVNG+ A+T+TTA+E + A ALLAP+RA F     A G+S  A
Sbjct:  490 DSVCFPASAEVELDTGRTVTMDQLAVGDNVRVAADAFSRVFLFTHKIASGSFAFVKLTTASGASLTVTRSHYVYANGKMTAAGAVKLGDKLELVGAAKCDIITATSPVTETGLYNPQTLHGDIVVNGIRASTFTTAVEPRVASALLAPLRALF----RATGMSTSA 651          
BLAST of Gchil6503.t1 vs. uniprot
Match: A0A2V3IRZ6_9FLOR (Indian hedgehog B protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRZ6_9FLOR)

HSP 1 Score: 136 bits (342), Expect = 9.380e-33
Identity = 75/152 (49.34%), Postives = 99/152 (65.13%), Query Frame = 0
Query:  182 VCFPADAEVRMHGGSLRRMDQLSIGDHVQTSQESFSSVFAWTHADAHTKYRFVQLDTKS-RSISLTASHYIYADGVTMAAGKVKVGMKLLLSDGSFESVTNKKTVWKTGLYNPQTLDGDIVVNGVVATTYTTAIELKTAHALLAPVRAAFSV 332
            +CFPA+A V M  GS +RMDQ+ IGD V+   + FS VF +TH  +    +FV+LD  S  SIS T+ HY+Y +G   AA   KVG  + L +G+  +V     V K+GLYNPQTL GDI+VN V A+T+TTAIE  TA A+LAP+R  + V
Sbjct:  271 ICFPAEATVEMEDGSTKRMDQVQIGDRVKVGYDMFSEVFMFTHKVSKRVSQFVKLDMASGASISATSGHYVYLNGRLAAARTAKVGDVMELGNGARSTVEKVSMVRKSGLYNPQTLHGDIIVNEVRASTFTTAIEAGTAQAMLAPLRMVYDV 422          
BLAST of Gchil6503.t1 vs. uniprot
Match: R7QIA6_CHOCR (HintN domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIA6_CHOCR)

HSP 1 Score: 135 bits (339), Expect = 3.000e-32
Identity = 77/160 (48.12%), Postives = 100/160 (62.50%), Query Frame = 0
Query:  182 VCFPADAEVRMHGGSLRRMDQLSIGDHVQTSQESFSSVFAWTHADAHTKYRFVQLDTKS-RSISLTASHYIYADGVTMAAGKVKVGMKLLLSDGSFESVTNKKTVWKTGLYNPQTLDGDIVVNGVVATTYTTAIELKTAHALLAPVRAAFSVLKNAMGIS 340
            VCFPADA V +  GS + M Q+ +GD V+ +  SFS VF +TH DA   + FV++ T+S  S+S T  HYIY +    AAG  KVG  L L DGS   V+N   V  TGL+NPQT+ GDI+VN V A+T+T  IE   A A+LAP+R    +L +  GIS
Sbjct:  284 VCFPADASVELENGSFKTMAQVELGDRVKVADGSFSDVFMFTHKDASAVHDFVRISTRSGASLSATRGHYIYINNAFAAAGSAKVGDTLELGDGSKTLVSNVGIVKGTGLFNPQTVHGDIIVNSVRASTFTRTIEPSAAQAMLAPLR----MLYDTFGIS 439          
The following BLAST results are available for this feature:
BLAST of Gchil6503.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IY57_9FLOR2.270e-15064.85Warthog protein 8 n=1 Tax=Gracilariopsis chorda Ta... [more]
R7Q8Q4_CHOCR2.370e-5934.32HintN domain-containing protein n=1 Tax=Chondrus c... [more]
R7Q619_CHOCR1.580e-3850.33HintN domain-containing protein n=1 Tax=Chondrus c... [more]
A0A2V3IX71_9FLOR1.760e-3650.98Indian hedgehog B protein n=1 Tax=Gracilariopsis c... [more]
A0A2V3J2J0_9FLOR1.730e-3550.00Temptin n=1 Tax=Gracilariopsis chorda TaxID=448386... [more]
A0A1X6P3Z4_PORUM1.220e-3448.80HintN domain-containing protein n=1 Tax=Porphyra u... [more]
A0A1X6P3Y5_PORUM1.230e-3450.92HintN domain-containing protein n=1 Tax=Porphyra u... [more]
A0A1X6P3R7_PORUM1.390e-3450.00HintN domain-containing protein n=1 Tax=Porphyra u... [more]
A0A2V3IRZ6_9FLOR9.380e-3349.34Indian hedgehog B protein n=1 Tax=Gracilariopsis c... [more]
R7QIA6_CHOCR3.000e-3248.13HintN domain-containing protein n=1 Tax=Chondrus c... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003587Hint domain N-terminalSMARTSM00306hint_7coord: 181..273
e-value: 3.5E-6
score: 36.6
IPR001767Hedgehog protein, Hint domainPFAMPF01079Hintcoord: 182..336
e-value: 5.8E-25
score: 88.0
NoneNo IPR availableGENE3D2.170.16.10Hedgehog/Intein (Hint) domaincoord: 183..311
e-value: 2.7E-30
score: 107.7
NoneNo IPR availablePIRSRPIRSR009400-2PIRSR009400-2coord: 183..337
e-value: 2.2E-21
score: 73.8
NoneNo IPR availablePANTHERPTHR11889:SF31PROTEIN HEDGEHOGcoord: 182..343
NoneNo IPR availablePANTHERPTHR11889HEDGEHOGcoord: 182..343
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..345
NoneNo IPR availableCDDcd00081Hintcoord: 183..307
e-value: 1.89274E-11
score: 59.205
IPR036844Hint domain superfamilySUPERFAMILY51294Hedgehog/intein (Hint) domaincoord: 183..310

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004390_piloncontigtig00004390_pilon:164884..165921 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6503.t1Gchil6503.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004390_pilon 164884..165921 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6503.t1 ID=Gchil6503.t1|Name=Gchil6503.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=346bp
MKLAFFSWLLAYVVLARAGFNVDNLNDGSLTRRQVEGSSCPRKIEFNTNK
NEIGAGDIQMEDKDCKGNGIITVRTLGASAPNTSSAAVKYFSGRNEDVGG
FLAGTIEGGNIECEAYSLKEGEELIFLKPDDDVEDVEWENVFGGATPLSR
DDDDDFELDDNDRFLIISNRCFYSETELLDRVCFPADAEVRMHGGSLRRM
DQLSIGDHVQTSQESFSSVFAWTHADAHTKYRFVQLDTKSRSISLTASHY
IYADGVTMAAGKVKVGMKLLLSDGSFESVTNKKTVWKTGLYNPQTLDGDI
VVNGVVATTYTTAIELKTAHALLAPVRAAFSVLKNAMGISAKASL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003587Hint_dom_N
IPR001767Hedgehog_Hint
IPR036844Hint_dom_sf