Gchil6570.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6570.t1
Unique NameGchil6570.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length781
Homology
BLAST of Gchil6570.t1 vs. uniprot
Match: A0A2V3IMR3_9FLOR (BTB domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMR3_9FLOR)

HSP 1 Score: 427 bits (1099), Expect = 3.810e-135
Identity = 295/762 (38.71%), Postives = 396/762 (51.97%), Query Frame = 0
Query:    1 MAKHRPIPLHTWLLDGSTLTPTSCHLRNFENRKRSEHDPLVTFRFG---ELGKNTQAAPELYVPASVLRCSSPPFEALVSSGFLESKTRIVHLEQKSFTAFQFIISFLKCEDIDMTTMPNCLPIYADRWGLDVLFDACFAFAEIRGWPTVHHFMCFALPIMRLLQVPRTFKHVFAARLGFGLRSTLDWIAGEEGCSNQRIRSIP-LVSPGSDCSNDSPIVSCANAVHGSP----CPRPPREALHH---RFFSDEHYESECFRPSPRYRGTAEHSXXXXXXXXXXXXXXXXXXXXXXXYEEKHEEEASFLVEPH--ANKKTVSKKNFRHLSQPDAFFNPITDSNGNPKDPFKARSDTKWPSPSQQAQREFATKRCKVTNASDPAHSFHHIPRINTSNHQRESGLHDVDSKKVVSPSPVTSLPTHHKTTSLGETYRKGRKRCEQPETANREYALWDAMKVQNMLPQALKELVWFSSKGYSSFILKGILHVLGNELTEDEKIDLLRFLPWDREEIAKALDPNSHITWRLCDWCVIARAQSLAAQLQAGGGREYSAVIKCPGLIHEACQQSDSLLKKEELNASIDTGNISIYVALRTNGCRG-DCAALLLNISNRKRKHIDALDEDLLERPLNVSVSVREMDCGCEAGSSVKAPIVPRMFYGLLRSDIKVRTLFIGSGITFTIMDDFEMSRWVQRHQRNCSLIVSLRLRIGEKRQKDPEKESEDDNGGRL--GRGKCPCGSCLEEETSGDEILDEDVYSDASDEDD 746
            MAK +PI L TW LDGSTLTPT+CHL+ +ENR+R   DPLVT RF          ++  EL++ ASVLR SS P  ALVSSGFLES T +VHL+ +SF  F+ I+SFL+CEDIDMTT+P+ L ++ADRWGLDVLF+AC A+AEIR W +V  FM F+LP+MR L VP TFK VFA+RL   L    DWI+G+EG  NQR R  P L +  S     S    C   V  SP    C RP    L H   +F+  EH  +     SP+       S                           H  ++    EP   A K + S  +    SQ               K P +++S+ +   P++Q   E      K    S PA          TSN  R +    +DS+                  S       G+KR    E+A +E ALWDAMK Q+ML +ALKEL W++  G   FIL G+L V+ ++L+E E++ LLR LPWDR +  + L+ +    W   +W ++ARAQ+ +A++ AGGG EYSAV    G   E CQ S +   K     ++    + I++AL     R      L L +S       D   EDL   PL VS+ +R MDC CEA S  K+ +     YG    ++KV+ L +G+ + F I+ +  +++WV+ HQ +C L + + LRI  K Q DPE +  D +  RL   RG CPCGSC EE  S D    ED+Y  ASD+ D
Sbjct:    1 MAKRKPIALRTWQLDGSTLTPTACHLQCYENRRRPNPDPLVTLRFAAPAHASSARESPQELFIHASVLRDSSSPLRALVSSGFLESTTHVVHLDHQSFQPFKVIVSFLQCEDIDMTTVPDHLAVFADRWGLDVLFEACLAYAEIRSWSSVDEFMLFSLPLMRFLHVPYTFKCVFASRLALCLSDVQDWISGDEGIRNQRRRLAPTLNNRHSRAQYTSHETICNTIVGTSPNDILCGRPA--VLSHGSAKFYCIEHLVTVVSEDSPKPAERPPSSPSSSAQVNPPDNQSPVPTQAENTDRAPHATKSFASCEPAVVAKKASTSSVSVARSSQAXXXXXXXXXXXXTSK-PSESKSEKR---PTEQPVTEVQDAIQKQRLKSLPAF---------TSNTDRSTRPQQLDSE----------------ARSFEMVSIAGKKRGRNSESAEKEQALWDAMKSQHMLYKALKELAWYAMPGCVPFILDGVLRVMEDKLSESEQVALLRILPWDRRDFEQVLNSDFTSKWSTREWRIVARAQAQSARI-AGGGDEYSAVFYWWGFADEVCQSSGAPFGKLRRETTMLADGLYIHLALHAREKRKLGHHPLFLTMSVLD----DTSSEDLRNMPLLVSIHLRAMDCSCEAASCSKSALDYNQSYGFRHKNVKVKFL-LGTPV-FEILSEHGVAQWVKLHQPSCGLALRVVLRIC-KDQVDPEADMNDAHDVRLRRARGICPCGSCYEEGLSDDSGQGEDIYIIASDDSD 723          
BLAST of Gchil6570.t1 vs. uniprot
Match: A0A2V3II75_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II75_9FLOR)

HSP 1 Score: 88.6 bits (218), Expect = 1.460e-14
Identity = 58/172 (33.72%), Postives = 88/172 (51.16%), Query Frame = 0
Query:    8 PLHTWLLDGSTLTPTSCHLRNFENRKRSEH--DPLVTF----RFGELGKNTQAAPELYVPASVLRCSSPPFEALVSSGFLESKTRIVHLEQKSFTAFQFIISFLKCEDIDMTTMPNCLPIYADRWGLDVLFDACFAFAEIRGWPTVHHFMCFA-LPIMRLLQVPRTFKHVFA 172
            PL  W L G++L+PT CHL+    R +S+   DPL+T      +            L +  S+LR +SP   AL+ +    S  R++         F  +  FL  + +D+   P  LP+ A RWGL+ LF+ACFA+AE R  PT    + +  +P++  ++VP TFK  FA
Sbjct:   13 PLGPWELRGASLSPTRCHLQAHARRLQSQSSTDPLITIIVQPPYTPXXXXXXXXXALTIHRSLLRAASPVLSALIPAD-ARSPVRVLDWPD----TFSLLRKFLYLQPLDLAVAPPDLPLAAARWGLNQLFEACFAYAE-RNLPTDMRALLWRWMPVLNAVRVPPTFKTTFA 178          
The following BLAST results are available for this feature:
BLAST of Gchil6570.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IMR3_9FLOR3.810e-13538.71BTB domain-containing protein n=1 Tax=Gracilariops... [more]
A0A2V3II75_9FLOR1.460e-1433.72Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011333SKP1/BTB/POZ domain superfamilyGENE3D3.30.710.10Potassium Channel Kv1.1; Chain Acoord: 21..141
e-value: 1.1E-8
score: 37.1
IPR011333SKP1/BTB/POZ domain superfamilySUPERFAMILY54695POZ domaincoord: 58..137
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 256..286
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 727..765
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 319..354
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 379..428
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 766..780
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 726..780
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 399..414

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004390_piloncontigtig00004390_pilon:659363..661705 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6570.t1Gchil6570.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004390_pilon 659363..661705 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6570.t1 ID=Gchil6570.t1|Name=Gchil6570.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=781bp
MAKHRPIPLHTWLLDGSTLTPTSCHLRNFENRKRSEHDPLVTFRFGELGK
NTQAAPELYVPASVLRCSSPPFEALVSSGFLESKTRIVHLEQKSFTAFQF
IISFLKCEDIDMTTMPNCLPIYADRWGLDVLFDACFAFAEIRGWPTVHHF
MCFALPIMRLLQVPRTFKHVFAARLGFGLRSTLDWIAGEEGCSNQRIRSI
PLVSPGSDCSNDSPIVSCANAVHGSPCPRPPREALHHRFFSDEHYESECF
RPSPRYRGTAEHSTTSEPSTPEHEFPPAYSAKNAYSYEEKHEEEASFLVE
PHANKKTVSKKNFRHLSQPDAFFNPITDSNGNPKDPFKARSDTKWPSPSQ
QAQREFATKRCKVTNASDPAHSFHHIPRINTSNHQRESGLHDVDSKKVVS
PSPVTSLPTHHKTTSLGETYRKGRKRCEQPETANREYALWDAMKVQNMLP
QALKELVWFSSKGYSSFILKGILHVLGNELTEDEKIDLLRFLPWDREEIA
KALDPNSHITWRLCDWCVIARAQSLAAQLQAGGGREYSAVIKCPGLIHEA
CQQSDSLLKKEELNASIDTGNISIYVALRTNGCRGDCAALLLNISNRKRK
HIDALDEDLLERPLNVSVSVREMDCGCEAGSSVKAPIVPRMFYGLLRSDI
KVRTLFIGSGITFTIMDDFEMSRWVQRHQRNCSLIVSLRLRIGEKRQKDP
EKESEDDNGGRLGRGKCPCGSCLEEETSGDEILDEDVYSDASDEDDTDSE
VDSDDVEEGYEENNGNENDVESISIEGTEA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011333SKP1/BTB/POZ_sf