Gchil6537.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6537.t1
Unique NameGchil6537.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length334
Homology
BLAST of Gchil6537.t1 vs. uniprot
Match: A0A2V3J5L2_9FLOR (Cyclin-U4-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5L2_9FLOR)

HSP 1 Score: 241 bits (614), Expect = 5.080e-72
Identity = 120/171 (70.18%), Postives = 142/171 (83.04%), Query Frame = 0
Query:   65 SAHCGDRPFVGSLTKEQFVEAASAHLDASASANDNTFPLPVFSEPESVFFSVVKPEIATREYMKRLVTYTQCSPAAFVLMLVYLDRVAKVNKKLVMTPFNMHRLLITALTLACKNLDDQCFANAHYAKVGGIPTVREMNRLELQFLKYLDYMLFVKREEHDTKVAQLRGTQ 235
            +AH G   F+GS++KEQF+E A+  LD  A+ N+  F LPV+SEPESVFFSVVKPEI T+EY+KRLVTYT CSPAAFV+ML+YL+RVA+   +L++T FNMHRLLITALTLACKNLDDQCFANAHYAKVGGIPTVREMNRLELQ LKYLD  LFV  E++  K+ +L G Q
Sbjct:  200 TAHIGR--FLGSMSKEQFIENAARDLDGRANRNEGKFALPVYSEPESVFFSVVKPEIPTKEYLKRLVTYTHCSPAAFVVMLIYLERVARNEARLIVTMFNMHRLLITALTLACKNLDDQCFANAHYAKVGGIPTVREMNRLELQLLKYLDRRLFVTEEDYKAKLKELTGMQ 368          
BLAST of Gchil6537.t1 vs. uniprot
Match: A0A2V3IPZ7_9FLOR (Cyclin-U4-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPZ7_9FLOR)

HSP 1 Score: 238 bits (607), Expect = 3.000e-71
Identity = 119/163 (73.01%), Postives = 135/163 (82.82%), Query Frame = 0
Query:   73 FVGSLTKEQFVEAASAHLDASASANDNTFPLPVFSEPESVFFSVVKPEIATREYMKRLVTYTQCSPAAFVLMLVYLDRVAKVNKKLVMTPFNMHRLLITALTLACKNLDDQCFANAHYAKVGGIPTVREMNRLELQFLKYLDYMLFVKREEHDTKVAQLRGTQ 235
            F+ S++KEQFVE AS  LD  A  N+  F LPV+SEPESVFFSVVKPEI T+EY+KRLVTYT CSPAAF++ML+YLDRVA+   +LV+T FNMHRLLITALTLACKNLDDQCFAN HYAKVGGIPTVREMNRLELQ LKYLD  LFV  E++  K+ QL G Q
Sbjct:  199 FLASMSKEQFVENASRDLDECARRNEGRFALPVYSEPESVFFSVVKPEIPTKEYLKRLVTYTHCSPAAFIVMLIYLDRVARNEPRLVVTLFNMHRLLITALTLACKNLDDQCFANVHYAKVGGIPTVREMNRLELQLLKYLDRRLFVTEEDYKAKLNQLAGMQ 361          
BLAST of Gchil6537.t1 vs. uniprot
Match: A0A2V3II09_9FLOR (Cyclin-U4-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II09_9FLOR)

HSP 1 Score: 214 bits (545), Expect = 3.730e-63
Identity = 107/166 (64.46%), Postives = 133/166 (80.12%), Query Frame = 0
Query:   73 FVGSLTKEQFVEAASAHLDASASANDNTFPLPVFSEPESVFFSVVKPEIATREYMKRLVTYTQCSPAAFVLMLVYLDRVAKVNKKLVMTPFNMHRLLITALTLACKNLDDQCFANAHYAKVGGIPTVREMNRLELQFLKYLDYMLFVKREEHDTKVAQLRGTQPPS 238
            FVG ++KEQFVE ASAHLD  A  N+  FPLP++SE ESVFFSVVKP+I T +Y+KRLVTY  CSP+AFV+ML+Y++R A++  +L++TPFNMHRLLITAL LACK LDD+C+AN HYAKVGGI +V+EMNRLELQ LKYLD  LFV  +E+  ++  L   Q PS
Sbjct:  179 FVGGMSKEQFVENASAHLDLRARQNEGKFPLPLYSEHESVFFSVVKPDIPTSDYLKRLVTYAYCSPSAFVVMLIYMNRTARIACRLMVTPFNMHRLLITALVLACKFLDDKCYANEHYAKVGGIASVQEMNRLELQLLKYLD-RLFVTEDEYRAELNLLTAVQHPS 343          
BLAST of Gchil6537.t1 vs. uniprot
Match: A0A6S7MDM2_LACSI (Uncharacterized protein n=2 Tax=Lactuca TaxID=4235 RepID=A0A6S7MDM2_LACSI)

HSP 1 Score: 109 bits (272), Expect = 9.590e-25
Identity = 59/149 (39.60%), Postives = 92/149 (61.74%), Query Frame = 0
Query:   74 VGSLTKEQFVEAASAHLDASASANDNTFPLPVFSEPESVFFSVVKPEIATREYMKRLVTYTQCSPAAFVLMLVYLDRVAKVNKKLVMTPFNMHRLLITALTLACKNLDDQCFANAHYAKVGGIPTVREMNRLELQFLKYLDYMLFVKRE 222
            +  L   + +   S+ L  +A +ND   PL   ++  S+F+ +++P I+  +Y++R+  Y  CSP+ +V+  VYLDR  K    L +  FN+HRLL+T++ ++ K +DD CF NA+YAKVGGI TV E+N LE+ FL  L + L V  E
Sbjct:   22 MADLMMPKLINLLSSLLQRAAESNDLNRPL--HTQKISIFYGLIRPNISIEKYLERIFRYANCSPSCYVVAYVYLDRFVKSQPFLPINSFNVHRLLVTSVLISIKFMDDICFNNAYYAKVGGISTV-EINLLEVDFLFGLGFQLNVTPE 167          
BLAST of Gchil6537.t1 vs. uniprot
Match: A0A7S1FDW1_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1FDW1_NOCSC)

HSP 1 Score: 107 bits (267), Expect = 2.870e-24
Identity = 60/142 (42.25%), Postives = 91/142 (64.08%), Query Frame = 0
Query:   94 ASANDNTFPLPVFSEPESV--FFSVVKPEIATREYMKRLVTYTQCSPAAFVLMLVYLDRVAKVNKKLVMTPFNMHRLLITALTLACKNLDDQCFANAHYAKVGGIPTVREMNRLELQFLKYLDYMLFVKREEHDTKVAQLRG 233
            A AN  T    +   P+ V  F ++  P+++  +Y+ R+ TY QCS   FVL L+YLDR+ K++ +  +   N+HRLL+T++ LA K  DD  ++NAHYAKVGG+ T +E+N LE QFL+ +D+ L V+ +E+D    Q RG
Sbjct:   24 ALANVLTHLASLTGRPQRVTRFHAIRPPQLSICDYLDRISTYFQCSNECFVLSLIYLDRIVKLHPEFTICNLNIHRLLVTSVMLAAKFFDDLYYSNAHYAKVGGLRT-QELNALESQFLRLIDWRLGVQPQEYD----QYRG 160          
BLAST of Gchil6537.t1 vs. uniprot
Match: A0A1X6NWM5_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NWM5_PORUM)

HSP 1 Score: 114 bits (284), Expect = 3.130e-24
Identity = 56/122 (45.90%), Postives = 84/122 (68.85%), Query Frame = 0
Query:  104 PVFSEPESVFFSVVKPEIATREYMKRLVTYTQCSPAAFVLMLVYLDRVAKVNKKLVMTPFNMHRLLITALTLACKNLDDQCFANAHYAKVGGIPTVREMNRLELQFLKYLDYMLFVKREEHD 225
            P  S+  S+FFS+VKP ++   Y+ RL+ Y   SP+ F++ LVYLDR+   + +L++TP NMHRLL+ A+TLA K ++D+   N+  A+VGGIP+  EMNRLE++ L+ LD+ L V  +  D
Sbjct:  433 PAASDMASIFFSLVKPSVSVAFYVARLLRYVHVSPSVFIVALVYLDRLGAGDARLLLTPLNMHRLLLAAVTLASKFVEDRAHRNSWLARVGGIPSQTEMNRLEVETLRRLDWRLAVSPDVFD 554          
BLAST of Gchil6537.t1 vs. uniprot
Match: A0A103YJB4_CYNCS (Cyclin n=1 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=A0A103YJB4_CYNCS)

HSP 1 Score: 106 bits (265), Expect = 5.880e-24
Identity = 57/146 (39.04%), Postives = 89/146 (60.96%), Query Frame = 0
Query:   74 VGSLTKEQFVEAASAHLDASASANDNTFPLPVFSEPESVFFSVVKPEIATREYMKRLVTYTQCSPAAFVLMLVYLDRVAKVNKKLVMTPFNMHRLLITALTLACKNLDDQCFANAHYAKVGGIPTVREMNRLELQFLKYLDYMLFV 219
            +  L     +   S+ L   A +ND  F  P+ ++  SVF++++KP I+   Y++++  Y  CSP+ FV+  +YLDR AK    L +   N+HRLL+T++ ++ K +DD C+ NA+YAKVGGI T  E+N LE+ FL  L + L V
Sbjct:    1 MADLVMPNLINLLSSLLQRVAESND--FERPLNTQKISVFYALIKPNISIGRYLEQIFKYANCSPSCFVVAYIYLDRFAKKQPLLPINSLNVHRLLVTSVLISIKFMDDXCYNNAYYAKVGGISTA-EINLLEVDFLFGLGFQLNV 143          
BLAST of Gchil6537.t1 vs. uniprot
Match: UPI0010A2C4AA (cyclin-P3-1 n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A2C4AA)

HSP 1 Score: 105 bits (261), Expect = 1.960e-23
Identity = 50/115 (43.48%), Postives = 78/115 (67.83%), Query Frame = 0
Query:  108 EPESVFFSVVKPEIATREYMKRLVTYTQCSPAAFVLMLVYLDRVAKVNKKLVMTPFNMHRLLITALTLACKNLDDQCFANAHYAKVGGIPTVREMNRLELQFLKYLDYMLFVKRE 222
            +P ++F     P ++ R+YM+R+  Y++CSP  FV+  +Y++R  +  K   +T FN+HRLLIT + +A K +DD C++N HYA+VGG+ T  EMNR+EL+ L  LD+ LF+  E
Sbjct:   52 DPITMFHGTKAPNMSLRQYMERIYKYSRCSPCCFVIAQIYMERYFQ-RKSGYLTSFNVHRLLITTIMVAAKFVDDGCYSNGHYARVGGVSTA-EMNRMELELLFSLDFRLFITTE 164          
BLAST of Gchil6537.t1 vs. uniprot
Match: A0A835S6W3_VANPL (Uncharacterized protein n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835S6W3_VANPL)

HSP 1 Score: 105 bits (262), Expect = 2.040e-23
Identity = 60/149 (40.27%), Postives = 89/149 (59.73%), Query Frame = 0
Query:   83 VEAASAHLDASASANDNTFPLPVFSEPESVFFSVVKPEIATREYMKRLVTYTQCSPAAFVLMLVYLDRVAKVNKKLVMTPFNMHRLLITALTLACKNLDDQCFANAHYAKVGGIPTVREMNRLELQFLKYLDYMLFVKREEHDTKVAQL 231
            ++  SA L+ +   N+         E  ++F    KP I  ++Y+KR+  Y +CSP+ FVL  +Y++R  +      +T  N+HRLLIT++T+A K +DD  F NA+YA+VGG+ T+ EMNRLEL FL  LD+ L V  +   T  AQL
Sbjct:   36 LDLLSAALERTILKNEQKLRSRKVKETFTMFHGRRKPNIGIQDYIKRIFKYAKCSPSCFVLAYIYIERFLQ-QLDTYLTSLNVHRLLITSVTIAAKFIDDAYFNNAYYARVGGVTTI-EMNRLELSFLCTLDFRLQVSLDSFRTYCAQL 182          
BLAST of Gchil6537.t1 vs. uniprot
Match: A0A059AYK7_EUCGR (Cyclin n=5 Tax=Myrtoideae TaxID=1699513 RepID=A0A059AYK7_EUCGR)

HSP 1 Score: 105 bits (262), Expect = 2.360e-23
Identity = 55/133 (41.35%), Postives = 85/133 (63.91%), Query Frame = 0
Query:   87 SAHLDASASANDNTFPLPVFSEPESVFFSVVKPEIATREYMKRLVTYTQCSPAAFVLMLVYLDRVAKVNKKLVMTPFNMHRLLITALTLACKNLDDQCFANAHYAKVGGIPTVREMNRLELQFLKYLDYMLFV 219
            S+ LD S   N+         +  ++F  V  P +  R+Y++R+  Y+ CSP+ FV+  +Y+DR  + N  +++T  N+HRLLIT+LT+A K +DD  F NA+YAKVGG+ T  E+NRLE++FL  +D+ L V
Sbjct:   37 SSALDRSVQKNERLLETSQSKDVITIFHGVRPPALTIRQYIERIFKYSACSPSCFVIAQIYMDRFVQ-NTDVLLTSLNVHRLLITSLTVAAKFVDDAFFNNAYYAKVGGVST-SELNRLEMKFLFSIDFRLHV 167          
The following BLAST results are available for this feature:
BLAST of Gchil6537.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J5L2_9FLOR5.080e-7270.18Cyclin-U4-1 n=1 Tax=Gracilariopsis chorda TaxID=44... [more]
A0A2V3IPZ7_9FLOR3.000e-7173.01Cyclin-U4-1 n=1 Tax=Gracilariopsis chorda TaxID=44... [more]
A0A2V3II09_9FLOR3.730e-6364.46Cyclin-U4-1 n=1 Tax=Gracilariopsis chorda TaxID=44... [more]
A0A6S7MDM2_LACSI9.590e-2539.60Uncharacterized protein n=2 Tax=Lactuca TaxID=4235... [more]
A0A7S1FDW1_NOCSC2.870e-2442.25Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]
A0A1X6NWM5_PORUM3.130e-2445.90Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A103YJB4_CYNCS5.880e-2439.04Cyclin n=1 Tax=Cynara cardunculus var. scolymus Ta... [more]
UPI0010A2C4AA1.960e-2343.48cyclin-P3-1 n=1 Tax=Prosopis alba TaxID=207710 Rep... [more]
A0A835S6W3_VANPL2.040e-2340.27Uncharacterized protein n=1 Tax=Vanilla planifolia... [more]
A0A059AYK7_EUCGR2.360e-2341.35Cyclin n=5 Tax=Myrtoideae TaxID=1699513 RepID=A0A0... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013922Cyclin PHO80-likePFAMPF08613Cyclincoord: 76..216
e-value: 4.2E-33
score: 115.0
IPR013922Cyclin PHO80-likePANTHERPTHR15615UNCHARACTERIZEDcoord: 81..265
NoneNo IPR availableGENE3D1.10.472.10coord: 74..240
e-value: 1.7E-43
score: 150.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..67
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 52..66
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..39
NoneNo IPR availableSUPERFAMILY101447Formin homology 2 domain (FH2 domain)coord: 22..29
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 125..215

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004390_piloncontigtig00004390_pilon:424982..425983 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6537.t1Gchil6537.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004390_pilon 424982..425983 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6537.t1 ID=Gchil6537.t1|Name=Gchil6537.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=334bp
MGASFAPAPHAHFLQKAPPPPPPPPPPPPPPPVHAPLLPLQPQPQVLHAH
ARAAPSSSSSSSHASAHCGDRPFVGSLTKEQFVEAASAHLDASASANDNT
FPLPVFSEPESVFFSVVKPEIATREYMKRLVTYTQCSPAAFVLMLVYLDR
VAKVNKKLVMTPFNMHRLLITALTLACKNLDDQCFANAHYAKVGGIPTVR
EMNRLELQFLKYLDYMLFVKREEHDTKVAQLRGTQPPSPTCVNVTPFPQA
PFSQAPFSQAPQRVQFDYERKPVVVGATTPFRYERKVASTAMSAERGYAH
AQVSTGSGLKRSTHADASAYRFPNWLRQQHQQP*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013922Cyclin_PHO80-like
IPR036915Cyclin-like_sf