Gchil6596.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil6596.t1
Unique Name	Gchil6596.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	269

Homology

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BLAST of Gchil6596.t1 vs. uniprot
Match: A0A2V3J0C9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0C9_9FLOR)

HSP 1 Score: 354 bits (908), Expect = 1.220e-120
Identity = 179/268 (66.79%), Postives = 222/268 (82.84%), Query Frame = 0

Query:    1 MASATPHAPDRLPPPPRFWGPFRPVFGGHTLFEAATSCFLPTFVVFLWRFLFACFLVTILVTYAVMGINVYRFESFGVWVHIGLALSFFLLSMCSFLFLVQKEHPPLSSPLACLSVVLHQMFATSVVFFAAAYWAFLRDYSKHIHMAELVQNAANVAMVLIDLLLALRIQFKLVYCLCFVSFAVTYLIFVWVRFAIINDFVYDFLDYRTHAKGITVAHYLGGLAWAILASFGVFLISRLSRLPCVKDRSTYSKEGSPASHLNRYFAFV 268
            MA+A P APD LPP P+FWGPFRP+FGGHTLFEAATSCFLPTFVVF+WRF+F+CFL+T LV +AV G  VY+F+ + VWVHIGLA+SFF LSMCSF+FL+QKEH P SS LA  S++L+Q+FAT+ +F    +WA L +Y +    A +VQ+AAN+AMV++DLLLALRIQFKL+YC+CFV F +TYL F+W+RFA+ + FVYDF DYR HA  ITVA+Y+G +AWA  A+F +FLISRLSR+P VK RST+SK+GSPASH NRYFAFV
Sbjct:    1 MANALPQAPDDLPPAPKFWGPFRPLFGGHTLFEAATSCFLPTFVVFVWRFVFSCFLLTTLVYFAVTG--VYQFQFYSVWVHIGLAISFFALSMCSFVFLLQKEHRPESSRLAFASILLYQIFATATLFLDVVFWALLHEYDEAPSFAVVVQHAANLAMVVVDLLLALRIQFKLIYCVCFVLFTLTYLAFMWIRFAVTDSFVYDFTDYRQHAAAITVAYYIGTVAWAFAAAFVMFLISRLSRVPFVKVRSTFSKDGSPASHRNRYFAFV 266

The following BLAST results are available for this feature:

BLAST of Gchil6596.t1 vs. uniprot

BLAST of Gchil6596.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J0C9_9FLOR	1.220e-120	66.79	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 267..268
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 197..215
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 237..268
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 174..196
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 168..173
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 149..167
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 216..236
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..45
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 78..99
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 67..77
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 138..148
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 111..137
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 100..110
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 46..66
None	No IPR available	TMHMM	TMhelix		coord: 173..195
None	No IPR available	TMHMM	TMhelix		coord: 115..137
None	No IPR available	TMHMM	TMhelix		coord: 78..100
None	No IPR available	TMHMM	TMhelix		coord: 215..237
None	No IPR available	TMHMM	TMhelix		coord: 49..71

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004390_pilon	contig	tig00004390_pilon:728425..729231 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil6596.t1	Gchil6596.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004390_pilon 728425..729231 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil6596.t1 ID=Gchil6596.t1|Name=Gchil6596.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=269bp
MASATPHAPDRLPPPPRFWGPFRPVFGGHTLFEAATSCFLPTFVVFLWRF
LFACFLVTILVTYAVMGINVYRFESFGVWVHIGLALSFFLLSMCSFLFLV
QKEHPPLSSPLACLSVVLHQMFATSVVFFAAAYWAFLRDYSKHIHMAELV
QNAANVAMVLIDLLLALRIQFKLVYCLCFVSFAVTYLIFVWVRFAIINDF
VYDFLDYRTHAKGITVAHYLGGLAWAILASFGVFLISRLSRLPCVKDRST
YSKEGSPASHLNRYFAFV*