Gchil6641.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6641.t1
Unique NameGchil6641.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length162
Homology
BLAST of Gchil6641.t1 vs. uniprot
Match: R7Q5R6_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5R6_CHOCR)

HSP 1 Score: 186 bits (472), Expect = 7.300e-54
Identity = 89/158 (56.33%), Postives = 121/158 (76.58%), Query Frame = 0
Query:    4 KGSSAKDGTVRQTIITILEAPRMCGVATKDVIVFKRQRDLYDKQIAEKNDEPGGEVTPTSYRESIDYYLLSIFISAEWIKAESMEDITEEQVQNCVRKRASFKPDGDDFTRIENIVRKVKIYISLKDPDERLWTLHYKYFTALQSHGLQKLPDNKPHI 161
            K SS  DGTVRQTIIT LEAPR+ GVATK    F ++RDLY+KQ+AEKN EPG  +TPTSYR SID   L IF++A+WIKAES+E I+EEQ++ CV+++AS+K +  +  RI+N+V+ VK+ +SLK+ ++R+W+LH +Y   L++ GL  LP  KPHI
Sbjct:    6 KPSSTSDGTVRQTIITNLEAPRLEGVATKYFTAFLKKRDLYEKQLAEKNREPGVHITPTSYRASIDDSYLRIFLTAKWIKAESLEAISEEQIRECVKEKASYKLEEYELDRIDNLVKDVKMDMSLKEAEDRVWSLHLRYLEVLEAAGLADLPTRKPHI 163          
BLAST of Gchil6641.t1 vs. uniprot
Match: A0A2V3IZ32_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZ32_9FLOR)

HSP 1 Score: 112 bits (281), Expect = 2.630e-28
Identity = 59/160 (36.88%), Postives = 98/160 (61.25%), Query Frame = 0
Query:    5 GSSAKDGTVRQTIITILEAPRMCGVATKDVIVFKRQRDLYDKQIAEKNDEPGGEVTPTSYRESIDYYLLSIFISAEWIKAESMEDITEEQVQNCVRKRASFKPDGDDFTRIENIVRKVKIYISLKDPD---ERLWTLHYKYFTALQSHGLQKLPDNKPHI 161
            G      TVRQTII  +EAPR+  ++T+D ++FK++R++Y++QIAEKN E G +V   +YR SI   +L +F++A W+  ES+E ITE+ ++ CV +RA   P+  D  +IE  ++ V++  + K      + LW L   Y T L++ G  +  + +P +
Sbjct:   11 GPETATDTVRQTIIESVEAPRLKDISTEDFVLFKQKREVYERQIAEKNAESGTQVPLKTYRNSITKPVLDMFVTACWVPVESVEGITEQHLRQCVEERARVYPEQYDLAQIERDLKYVRMDKNTKSNSLEMQVLW-LGLNYSTTLENLGYSEFIEKQPQL 169          
BLAST of Gchil6641.t1 vs. uniprot
Match: A0A2V3IG26_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IG26_9FLOR)

HSP 1 Score: 115 bits (289), Expect = 9.210e-28
Identity = 58/159 (36.48%), Postives = 101/159 (63.52%), Query Frame = 0
Query:    5 GSSAKDGTVRQTIITILEAPRMCGVATKDVIVFKRQRDLYDKQIAEKNDEPGGEVTPTSYRESIDYYLLSIFISAEWIKAESMEDITEEQVQNCVRKRASFKPDGDDFTRIENIVRKVKIYISLKDP--DERLWTLHYKYFTALQSHGLQKLPDNKPHI 161
            G      TVR+TII  +EAPR+  ++T+D ++FK++R++Y+++IAEKN E G +V  T+YR SI   +L +F++A W+  ES+EDITE+ ++ CV ++A   P+  D  +IE  ++ V++  + K    D ++  L  KY T L++ G  +  + +P +
Sbjct:   11 GPETATDTVRKTIIESVEAPRLKDISTEDFVLFKQKREVYERKIAEKNAESGIQVPLTTYRNSITKPVLDMFVTACWVPVESVEDITEQHLRQCVEEQARVNPEEYDLAQIERDLKYVRMDKNTKSNSLDMQVLRLGLKYSTTLENLGYSEFIEKQPQL 169          
BLAST of Gchil6641.t1 vs. uniprot
Match: A0A2V3IRL8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRL8_9FLOR)

HSP 1 Score: 107 bits (268), Expect = 3.100e-24
Identity = 56/159 (35.22%), Postives = 95/159 (59.75%), Query Frame = 0
Query:    5 GSSAKDGTVRQTIITILEAPRMCGVATKDVIVFKRQRDLYDKQIAEKNDEPGGEVTPTSYRESIDYYLLSIFISAEWIKAESMEDITEEQVQNCVRKRASFKPDGDDFTRIENIVRKVKIYISLKDPDERLWTLHY--KYFTALQSHGLQKLPDNKPHI 161
            G      TVRQTII  +EAPR+  ++T+D ++FK++ ++Y++QIAEKN E G +V   +Y  SI   +L IF++A W+  ES+EDITE+ ++ CV + A   P+  +  +IE  ++ V++  + K     +  L    KY T L++ G  +  + +P +
Sbjct:   11 GPETPTDTVRQTIIESVEAPRLRDISTEDFVLFKQKLEVYERQIAEKNAESGIQVPLKTYWNSITKPVLDIFVTACWVPVESVEDITEQHLRQCVEEPAQVNPEEYNLAQIERDLKYVRMDKNTKSNSLEMQVLRLGLKYSTTLENLGYSEFIEKQPQL 169          
BLAST of Gchil6641.t1 vs. uniprot
Match: A0A2V3IKC4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKC4_9FLOR)

HSP 1 Score: 83.6 bits (205), Expect = 5.540e-18
Identity = 40/92 (43.48%), Postives = 65/92 (70.65%), Query Frame = 0
Query:    5 GSSAKDGTVRQTIITILEAPRMCGVATKDVIVFKRQRDLYDKQIAEKNDEPGGEVTPTSYRESIDYYLLSIFISAEWIKAESMEDITEEQVQ 96
            G      TVRQTII  +EAPR+  ++T+  ++FK++R++Y++QIAEKN E G +V  T+ R SI   +L +F++A W+  +S+EDITE+ ++
Sbjct:   11 GPETATDTVRQTIIESVEAPRLKDISTEYFVLFKQKREVYERQIAEKNAELGIQVPLTTLRNSITKPVLDMFVTACWVAVDSVEDITEQHLR 102          
BLAST of Gchil6641.t1 vs. uniprot
Match: A0A2V3ID65_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ID65_9FLOR)

HSP 1 Score: 54.7 bits (130), Expect = 8.160e-6
Identity = 27/89 (30.34%), Postives = 49/89 (55.06%), Query Frame = 0
Query:   75 IFISAEWIKAESMEDITEEQVQNCVRKRASFKPDGDDFTRIENIVRKVKIYISLKDPDERLWTLHY--KYFTALQSHGLQKLPDNKPHI 161
            +F++A W+  ES+EDITE+ ++ CV +RA   P+  D  +IE  ++ V++    K     +  L    KY T L++ G  +  + +P +
Sbjct:    1 MFVTACWVPVESVEDITEQHLRQCVEERARVNPEEYDLAQIERDLKYVRMDKITKSNSLEMQVLRLGLKYSTTLENLGYSEFIEKQPQL 89          
The following BLAST results are available for this feature:
BLAST of Gchil6641.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
R7Q5R6_CHOCR7.300e-5456.33Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IZ32_9FLOR2.630e-2836.88Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IG26_9FLOR9.210e-2836.48Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IRL8_9FLOR3.100e-2435.22Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IKC4_9FLOR5.540e-1843.48Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ID65_9FLOR8.160e-630.34Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004390_piloncontigtig00004390_pilon:1282447..1282932 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6641.t1Gchil6641.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004390_pilon 1282447..1282932 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6641.t1 ID=Gchil6641.t1|Name=Gchil6641.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=162bp
MTDKGSSAKDGTVRQTIITILEAPRMCGVATKDVIVFKRQRDLYDKQIAE
KNDEPGGEVTPTSYRESIDYYLLSIFISAEWIKAESMEDITEEQVQNCVR
KRASFKPDGDDFTRIENIVRKVKIYISLKDPDERLWTLHYKYFTALQSHG
LQKLPDNKPHI*
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