Gchil8293.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil8293.t1
Unique Name	Gchil8293.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	336

Homology

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BLAST of Gchil8293.t1 vs. uniprot
Match: A0A2V3ISQ6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISQ6_9FLOR)

HSP 1 Score: 157 bits (398), Expect = 5.110e-42
Identity = 74/121 (61.16%), Postives = 98/121 (80.99%), Query Frame = 0

Query:  154 VQLSHLADMPANEIVPPSELALVLPTHDASVNDDPDVLYLLEKASKYGGLDSEQPSRHKYAKYTFLAGFLLAKRGLPPQSVPDDPDDVYVKLYNLYYSNPGRMGPDPEALLIRTLAKSRHH 274
            +QL++ + M A +++ PSELA+++P  + + + D D++YLLEKA+KYGG+D   PSRHKYAKY FLAG LLAKRGLP Q++PDDP+D+YVKL + Y S+P RMGPDPE LLIRTL+KSR H
Sbjct:  153 MQLANYSKMSAQDVISPSELAMLVPKQEET-HMDCDLVYLLEKANKYGGVDGGHPSRHKYAKYVFLAGLLLAKRGLPQQAIPDDPEDLYVKLLHFYMSDPSRMGPDPEGLLIRTLSKSRRH 272

[Close]

BLAST of Gchil8293.t1 vs. uniprot
Match: R7QBZ2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QBZ2_CHOCR)

HSP 1 Score: 75.1 bits (183), Expect = 1.500e-11
Identity = 38/95 (40.00%), Postives = 58/95 (61.05%), Query Frame = 0

Query:  180 HDASVNDDPDVLYLLEKASKYGG-LDSEQPSRHKYAKYTFLAGFLLAKRGLPPQSVPDDPDDVYVKLYNLYYSNPGRMGPDPEALLIRTLAKSRH 273
            +DA +  + D+  ++ KA+ YGG +  +  S  KY KY FLAGF+L  RG P  + P DP+D+YVK+ N++ +NP R+   P + L   LA  +H
Sbjct:  165 YDAPI--EKDLAKIIAKANHYGGEIHKKHFSNKKYTKYVFLAGFILYMRGYPQIANPYDPEDIYVKIRNVFIANPNRLEQAPGSALANVLAGRKH 257

The following BLAST results are available for this feature:

BLAST of Gchil8293.t1 vs. uniprot

BLAST of Gchil8293.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3ISQ6_9FLOR	5.110e-42	61.16	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
R7QBZ2_CHOCR	1.500e-11	40.00	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..54
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 261..335
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 269..321

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004384_pilon	contig	tig00004384_pilon:1326161..1327168 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil8293.t1	Gchil8293.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004384_pilon 1326161..1327168 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil8293.t1 ID=Gchil8293.t1|Name=Gchil8293.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=336bp
MQQPNAAYAVQDYPQPGDPYPPTTSAPYAAQPNDPAVAAPSASDAPDAPD
PNAAAAAAAAAAAAASNSPYNEPYGQSQQQQSYAQYAAYAAQPPAAAPAP
APAPAPAPAPAPYAPAYAAPAPAPMAYPPTQMLYAPPPMAPYYAPMSYMA
RPMVQLSHLADMPANEIVPPSELALVLPTHDASVNDDPDVLYLLEKASKY
GGLDSEQPSRHKYAKYTFLAGFLLAKRGLPPQSVPDDPDDVYVKLYNLYY
SNPGRMGPDPEALLIRTLAKSRHHRRHHHHRDRHHDDHHHHHRHRRDRER
SSSRNGRKSGSRSRSRSRSRRSRSKDGTYSDSSNE*