Gchil8227.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8227.t1
Unique NameGchil8227.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length253
Homology
BLAST of Gchil8227.t1 vs. uniprot
Match: A0A2V3IQN7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQN7_9FLOR)

HSP 1 Score: 315 bits (807), Expect = 1.140e-105
Identity = 170/218 (77.98%), Postives = 197/218 (90.37%), Query Frame = 0
Query:    1 MDAPSQTIWPQLAIVAAVAASHMSMPNHWLPYSLVARAHSWSVRKALLLTALGAAGHVTATIAISLLISGIGAAFISHQQYRVLSSALLFVWGLYYLYSYFSKRKTT-CCESSEKLPTLSKSQNVQKGDSSAVQRTAAISLVMLTTLSPCVGSMPVLVTLMAPPVAPSTVMLAAAVLFLTSMSVCCALVALSLLGASTMECTAVRKHERLILAAGLIL 217
            MDA +Q IWPQLAIVAAVAASHMSMPNHWLPYSLVARAHSW++R+ALLLTA+GA GHV  TIAISLLIS IG AFISH+QYRV+SS LL V GLYY Y+YFSKRK++ CC+S+E LP+LSKSQ+  + DS+AVQRTAAISL+MLTTLSPCVGSMPVLVTLMAPPV PSTV+LAAAVLFLTSM+VCC LVA+S+LGAST+EC+ +R+HERLIL  GL++
Sbjct:    1 MDAHNQPIWPQLAIVAAVAASHMSMPNHWLPYSLVARAHSWTLRRALLLTAIGAFGHVAVTIAISLLISEIGGAFISHEQYRVMSSVLLMVLGLYYFYTYFSKRKSSACCDSTEILPSLSKSQSTSQTDSAAVQRTAAISLIMLTTLSPCVGSMPVLVTLMAPPVKPSTVLLAAAVLFLTSMTVCCVLVAISMLGASTIECSPIRRHERLILGVGLLV 218          
BLAST of Gchil8227.t1 vs. uniprot
Match: R7Q7P9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7P9_CHOCR)

HSP 1 Score: 122 bits (307), Expect = 3.690e-29
Identity = 79/167 (47.31%), Postives = 104/167 (62.28%), Query Frame = 0
Query:   52 LGAAGHVTATIAISLLISGIGAAFISHQQYRVLSSALLFVWGLYYLYSYF-SKRKTTCCESSEKLPTLSKSQNVQKGDSSAVQRTAAISLVMLTTLSPCVGSMPVLVTLMAPPVAPSTVMLAAAVLFLTSMSVCCALVALSLLGASTMECTAVRKHERLILAAGLIL 217
            LGA GHV  T+ ++L IS +  +F S   YR LSS  LFV+GLYYLY+YF ++R+ +CCE          S + +  D  AV R AA SL++LT +SPCVGSMPVL+  +APP++ STVM A   + L S  V   LVA+S  G+ T+    VR HER IL   LI+
Sbjct:  148 LGALGHVLNTLLLTLAISELSGSFFSEDAYRFLSSLSLFVFGLYYLYTYFIARRRESCCEPGANGSAPVVSTSARPTDPPAVHRAAAGSLLLLTAVSPCVGSMPVLIAFLAPPLSVSTVMAAGVTMLLASAGVMMVLVAVSYAGSKTLGFAKVRHHERCILGVALIV 314          
BLAST of Gchil8227.t1 vs. uniprot
Match: A0A5J4Z1N5_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z1N5_PORPP)

HSP 1 Score: 103 bits (256), Expect = 1.020e-22
Identity = 76/249 (30.52%), Postives = 127/249 (51.00%), Query Frame = 0
Query:   11 QLAIVAAVAASHMSMPNHWLPYSLVARAHSWSVRKALLLTALGAAGHVTATIAISLLISGIGAAFISHQQYRVLSSALLFVWGLYYLYSYFS--------------------KRKTTCCESSEKLPTLSKSQNVQKGDSSAVQ-----------------RTAAISLVMLTTLSPCVGSMPVLVTLMAPPV--APSTVMLAAAVLFLTSMSVCCALVAL---SLLGASTMECTAVRKHERLILAAGLIL 217
            +LA++ AV+  H+SMPNHW  + +V +A  WS+   L+LT LGA GHV  T+  ++L++ +G AF+    ++ L +A+LF++G YY+ S+F                      R T C   +    +L+  Q     D+  VQ                 R   +S+V+L T SPCVGS P+L++ +A  +   P  V+ +   +    ++  C +VAL   +++G S M    V+++E+LI+   LIL
Sbjct:    6 ELAVLVAVSGVHLSMPNHWAQFVIVGKAQKWSMATILMLTVLGALGHVLGTVIAAVLMAALGDAFVPKSLHKYLPTAVLFIFGAYYVASHFRLMPDPCACEHDAEEAGRLQPDRHTLCSNHNHTGSSLADEQGASGEDTKFVQACEEENEQSDAAYAKQQRFMQVSVVLLPTFSPCVGSSPILISSIARAIDGQPDAVLDSMFYVLAMVIAAVCTMVALVFFTVIGTSRMNFAFVQRNEKLIIGGSLIL 254          
BLAST of Gchil8227.t1 vs. uniprot
Match: A0A7R9Y0N9_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9Y0N9_9VIRI)

HSP 1 Score: 67.4 bits (163), Expect = 8.100e-10
Identity = 63/207 (30.43%), Postives = 99/207 (47.83%), Query Frame = 0
Query:   24 SMPNHWLPYSLVARAHSWSVRKALLLTALGAAGHVTATIAISLLISGIGAAFISHQQYRVLSSALLFVWGLYYLYSYFSKR---KTTCC--------ESSEKLPTLSKSQN--VQKGDSSAVQRTAAISLVMLTTLSPCVGSMPVLVTLMAPPVAPSTVMLAAAVLFLTSMSVCCALVALSLLGASTMECTAVRKHERLILAAGLIL 217
            ++P+HWLP++ VARA  W +R+AL +TA+GAA HV AT                 +    L+S  L   G  YLY++   +   K  CC         S   LP   K+ N   Q  D SA+     + +V +  LSPC  ++PV     A    P  V     ++F  + +  C LV  +L+G ST+    + +++RL++ A L++
Sbjct:    2 ALPSHWLPFAAVARAQRWPLRRALGVTAIGAAAHVAATAXXXXXXXXXXXXXXXEEFVTRLASLTLIALGGRYLYAHARAKPSDKRACCAGHSHGGAHSHSLLPLDEKAGNESAQVDDWSAM-----LGVVAVPALSPCATTLPVFFA--AAESGPLAVAALTLMMFAGAAAAMCGLVGATLVGISTVRTRWIERNDRLVVGACLLI 201          
BLAST of Gchil8227.t1 vs. uniprot
Match: A0A258FQ93_9PROT (Uncharacterized protein n=1 Tax=Caulobacterales bacterium 32-69-10 TaxID=1970503 RepID=A0A258FQ93_9PROT)

HSP 1 Score: 65.1 bits (157), Expect = 4.240e-9
Identity = 46/147 (31.29%), Postives = 76/147 (51.70%), Query Frame = 0
Query:   10 PQLAIVAAVAASHMSMPNHWLPYSLVARAHSWSVRKALLLTALGAAGHVTATIAISLLISGIGAAFISH--QQYRVLSSALLFVWGLYYLYSYFSKRKTTCCESSEKLPTLSKSQNVQKGDSSAVQRTAAISLVMLTTLSPCVGSMP 154
            P  A   A+A  H ++P HWLP+ LV RAH+WS R+ L +TAL   GHV  T+ + ++++  G A   H  + +  +   LL + GL+YL     +R+ +  + + +L          + D++A+       LV + T SPC   +P
Sbjct:    8 PIAATGFAIAFLHAALPTHWLPFVLVGRAHAWSGRRVLGVTALAGGGHVLFTLGLGIVVTTAGLAMAPHLGEVFHQIVGGLLVLLGLFYLARQALRREHSHGDRTARLGG--------RSDAAAIT-----GLVAMLTFSPCEAFLP 141          
BLAST of Gchil8227.t1 vs. uniprot
Match: UPI0014206456 (hypothetical protein n=1 Tax=Brevundimonas terrae TaxID=363631 RepID=UPI0014206456)

HSP 1 Score: 59.3 bits (142), Expect = 5.290e-7
Identity = 43/132 (32.58%), Postives = 64/132 (48.48%), Query Frame = 0
Query:   19 AASHMSMPNHWLPYSLVARAHSWSVRKALLLTALGAAGHV--TATIAISLLISGIGAAFISHQQYRVLSSALLFVWGLYYLYSYFSKRKTTCCESSEKLPTLSKSQNVQKGDSSAVQRTAAISLVMLTTLSP 148
            AA H ++P HWLP+ LV RA  W++R+  ++    A  HV  TA I  ++ I+G+      H     LSSALLF++G +YL  Y+ +     C+  E              +     RTA + L+ L   SP
Sbjct:   22 AALHAALPTHWLPFVLVGRAQGWTMRRLGMVVVAAALAHVATTALIGGAVTIAGVALDRWLHGVLPHLSSALLFLFGAFYLARYWHRTTVPDCKGCEH------------DEPKVSDRTAILGLIALMAASP 141          
BLAST of Gchil8227.t1 vs. uniprot
Match: A0A809QR92_9BACT (Uncharacterized protein n=1 Tax=Candidatus Brocadia pituitae TaxID=2608983 RepID=A0A809QR92_9BACT)

HSP 1 Score: 58.2 bits (139), Expect = 1.670e-6
Identity = 51/205 (24.88%), Postives = 99/205 (48.29%), Query Frame = 0
Query:   18 VAASHMSMPNHWLPYSLVARAHSWSVRKALLLTALGAAGHVTATIAISLLISGIGAAFISHQQY--RVLSSALLFVWGLYYLYS---YFSKRKTTCCESSEKLPTLSKSQNVQKGDSSAVQRTAAISLVMLTTLSPCVGSMPVLVTLMAPPVAPSTVMLAAAVLFLTSMSVCCALVALSLLGASTMECTAVRKHERLILAAGLIL 217
            +A +H  MPNHW+P++L+ +   WS+ K + +TA+   GH   T  +  +I+ +G     + +     L+ ++L V G+ ++        K      + S+K                    T AISL ++ +LSPCV ++P+   L A   + S ++L +A+L +T++S    L  L+  G   +   ++ ++E+ I+   L +
Sbjct:   47 IALTHAIMPNHWMPFALIGKGQKWSLTKTIFVTAIAGLGHSITTTLLGFIIAILGFHITKYAETFAEPLAGSILIVLGITFVIIGRLRHGKHNHNHAKFSDK--------------------TIAISLFIMLSLSPCVAALPIF--LAASTFSWSKLLLLSAILSVTTISGMLVLTILAYSGVKKINLCSIEEYEKEIIGGILTI 229          
The following BLAST results are available for this feature:
BLAST of Gchil8227.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A2V3IQN7_9FLOR1.140e-10577.98Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q7P9_CHOCR3.690e-2947.31Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A5J4Z1N5_PORPP1.020e-2230.52Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A7R9Y0N9_9VIRI8.100e-1030.43Hypothetical protein n=1 Tax=Prasinoderma colonial... [more]
A0A258FQ93_9PROT4.240e-931.29Uncharacterized protein n=1 Tax=Caulobacterales ba... [more]
UPI00142064565.290e-732.58hypothetical protein n=1 Tax=Brevundimonas terrae ... [more]
A0A809QR92_9BACT1.670e-624.88Uncharacterized protein n=1 Tax=Candidatus Brocadi... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36394OS01G0277700 PROTEINcoord: 15..238
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 46..75
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 169..197
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 227..252
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 99..135
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 158..168
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 76..80
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..25
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 26..45
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 198..208
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 81..98
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 136..157
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 209..226
NoneNo IPR availableTMHMMTMhelixcoord: 83..102
NoneNo IPR availableTMHMMTMhelixcoord: 173..195
NoneNo IPR availableTMHMMTMhelixcoord: 208..227
NoneNo IPR availableTMHMMTMhelixcoord: 46..68
NoneNo IPR availableTMHMMTMhelixcoord: 136..158

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004384_piloncontigtig00004384_pilon:746565..747411 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8227.t1Gchil8227.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004384_pilon 746565..747411 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8227.t1 ID=Gchil8227.t1|Name=Gchil8227.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=253bp
MDAPSQTIWPQLAIVAAVAASHMSMPNHWLPYSLVARAHSWSVRKALLLT
ALGAAGHVTATIAISLLISGIGAAFISHQQYRVLSSALLFVWGLYYLYSY
FSKRKTTCCESSEKLPTLSKSQNVQKGDSSAVQRTAAISLVMLTTLSPCV
GSMPVLVTLMAPPVAPSTVMLAAAVLFLTSMSVCCALVALSLLGASTMEC
TAVRKHERLILAAGLILLAALTFFVFTDDHEHHHHHGVQPLDQHNHHVHA
HQ*
back to top