Gchil8235.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8235.t1
Unique NameGchil8235.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length224
Homology
BLAST of Gchil8235.t1 vs. uniprot
Match: A0A2V3IQP8_9FLOR (Signal peptidase complex subunit 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQP8_9FLOR)

HSP 1 Score: 293 bits (750), Expect = 4.720e-98
Identity = 152/223 (68.16%), Postives = 181/223 (81.17%), Query Frame = 0
Query:    1 MSRRARTSTQDESVSTDVTETSVRRSTXXXXXXXXXXXXKLDKSGLYDLQQVKRLLDDEIMAFMEDQGYVESTTASNIKIVAGTVAVAAALYSHFGPGEFPANKPVVFACVAIYLVCVGLINISSFVLEASAIFVGSLSKRVKQVSKIALCDKVWIHSTIGGKGSSAYKVEIRQAPRSKHGSVSKSTPYEKYITEDGHFLSSEFRIDMTALLSQLSPGSKKTN 223
            M+RR R S++D SV+T     S  R+             KLDKSGLYD+QQVKRLLDDE+MAFM+DQGYVEST  SN+KIVAGT+AVAAALYSHFGPGEFPANKPVVFACVAIY+ CV LIN++SFVLEASAI+VG+L+ R+ QVS+ +L  K+W+H+TIGGKGSS YKVE+R A RSK GSV+KSTPYEK+ITEDG FLS  FR +M ++LS+LSPG KKTN
Sbjct:    1 MNRRGRRSSEDSSVTTATDTASTSRTVETNESKPKA---KLDKSGLYDMQQVKRLLDDEVMAFMDDQGYVESTFVSNVKIVAGTIAVAAALYSHFGPGEFPANKPVVFACVAIYIFCVSLINLTSFVLEASAIYVGTLTSRMIQVSQGSLAKKIWVHTTIGGKGSSDYKVELRLASRSKKGSVAKSTPYEKFITEDGRFLSDVFRAEMRSILSELSPGVKKTN 220          
BLAST of Gchil8235.t1 vs. uniprot
Match: R7Q936_CHOCR (Signal peptidase complex subunit 2 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q936_CHOCR)

HSP 1 Score: 199 bits (507), Expect = 3.670e-61
Identity = 93/184 (50.54%), Postives = 137/184 (74.46%), Query Frame = 0
Query:   40 KLDKSGLYDLQQVKRLLDDEIMAFMEDQGYVESTTASNIKIVAGTVAVAAALYSHFGPGEFPANKPVVFACVAIYLVCVGLINISSFVLEASAIFVGSLSKRVKQVSKIALCDKVWIHSTIGGKGSSAYKVEIRQAPRSKHGSVSKSTPYEKYITEDGHFLSSEFRIDMTALLSQLSPGSKKTN 223
            K+DKSGLYDL QVKRLLDDE++  ME +GY E+   SNIKI+AGT+AVAAA++SHF P EFP N+ +V  CV +Y  C+G IN+S+++ +A+A++VG L+ + K+++K  L +KVW+ + +G KGSS Y++ IR +P+   G V  +  YEKY TE+G FL++ F+ D++  +SQ+  GSKK+N
Sbjct:   37 KIDKSGLYDLAQVKRLLDDEMIECMEAKGYDEAVLVSNIKILAGTIAVAAAMFSHFNPWEFPGNRNIVLGCVLLYGACIGSINLSAYIWDANAMYVGRLAAKAKRIAKSKLPEKVWVSTRLGEKGSSIYRLTIRTSPQQSEGKVEITNGYEKYFTEEGRFLATSFQTDLSDAVSQVGSGSKKSN 220          
BLAST of Gchil8235.t1 vs. uniprot
Match: A0A835YAC2_9CHLO (Signal peptidase complex subunit 2 n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835YAC2_9CHLO)

HSP 1 Score: 77.0 bits (188), Expect = 9.760e-14
Identity = 57/178 (32.02%), Postives = 84/178 (47.19%), Query Frame = 0
Query:   41 LDKSGLYDLQQVKRLLDDEIMAFMEDQGYVESTTASNIKIVAGTVAVAAALYSHFGPGEFPANKPVVFACVAIYLVCVGLINISSFVLEASAIFVGSLSKRVKQVSKIALCDKVWIHSTIGGKGSSAYKVEIRQAPRSKHGSVSKSTPYE--KYITEDGHFLSSEFRIDMTALLSQLS 216
            L  S LY+   +K  LDD     + DQGY E     NIKI  G +A+ AA++SHFGPG+FPAN   VFACV  Y+V    +N+ S  +E  A  V    +  K V   +   +           S  Y + I      +  S+   + Y+  KY  EDG+     ++ ++  L + L+
Sbjct:   30 LKLSNLYEGGALKAALDDVAREAVLDQGYQEDVMIQNIKIGLGLLAIGAAVFSHFGPGKFPANWWQVFACVVTYVVLTIAMNVYSMRVEGDAFLVTKPFRGTKGVRLSSAMHRF----------SEDYTLAITD---KEDPSLEVQSTYKVPKYFHEDGYMAEGAWKEEVDKLAASLA 194          
BLAST of Gchil8235.t1 vs. uniprot
Match: A0A383W038_TETOB (Signal peptidase complex subunit 2 n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383W038_TETOB)

HSP 1 Score: 72.0 bits (175), Expect = 6.700e-12
Identity = 51/173 (29.48%), Postives = 77/173 (44.51%), Query Frame = 0
Query:   42 DKSGLYDLQQVKRLLDDEIMAFMEDQGYVESTTASNIKIVAGTVAVAAALYSHFGPGEFPANKPVVFACVAIYLVCVGLINISSFVLEASAIFVGSLSKRVKQVSKIALCDKVWIHSTIGGKGSSAYKVEIRQAPRSKHGSVSKSTPYEKYITEDGHFLSSEFRIDMTALLSQ 214
            +K  L D   +K  LD      +   GYVE    SN+KI  G +A+A A+YSHFGPG+FPAN   V  CVA Y V   ++ I   + E  +  +       +   ++A   + +         S  Y + I  A +     V   T    Y   DG+   ++++  +  LLSQ
Sbjct:   19 EKINLDDGHAIKHKLDSTASEVILQSGYVEDHLISNVKITLGLIAIAVAIYSHFGPGKFPANWSAVVYCVAAYCVLNLVLIIFCNIKEGDSFLITHPKPGSEYGLRVASRMERY---------SDQYTLIISSANKWLDREVKMETSVTDYFHSDGYLAEAKYKHHVAKLLSQ 182          
BLAST of Gchil8235.t1 vs. uniprot
Match: A0A8J4QXU0_9ROSI (Uncharacterized protein n=2 Tax=Fagaceae TaxID=3503 RepID=A0A8J4QXU0_9ROSI)

HSP 1 Score: 70.1 bits (170), Expect = 2.840e-11
Identity = 51/186 (27.42%), Postives = 89/186 (47.85%), Query Frame = 0
Query:   43 KSGLYDLQQVKRLLDDEIMAFMEDQGYVESTTASNIKIVAGTVAVAAALYSHFGPGEFPANKPVVFACVAIYLVCVGLINISSFVLEASAIFVGSLSKRVKQVSKIALCDKVWIHSTIGGKGSSAYKVEIRQAPRSKHGSVSKSTPYE------KYITEDGHFLSSEFRIDMTALLSQLSPGSKKT 222
            K+ L D   +K +LD+ +   +  +GYVE    SNI++V GT+ +  AL + F   +FP N+  + AC+A+Y+V  GL+ +  +  E +AI            + + +  K+        + S  Y + I     S   SVS + P +      ++ T+DG  +   F  D+ AL+ Q +   KK+
Sbjct:   16 KANLLDHHSIKHILDESVSEIVTSRGYVEDVRMSNIRLVMGTIIIVIALVAQFYKKKFPENRDFLIACIALYVVFNGLLQLIIYTKEKNAILFTYPPAGSFTSTGLVVSSKL-------PRFSDMYTLIIAS---SDPKSVSANEPVQFTKSVTQWFTKDGVLVEGLFWKDVEALIDQYAREPKKS 191          
BLAST of Gchil8235.t1 vs. uniprot
Match: A0A059BHX2_EUCGR (Signal peptidase complex subunit 2 n=4 Tax=Myrtoideae TaxID=1699513 RepID=A0A059BHX2_EUCGR)

HSP 1 Score: 68.9 bits (167), Expect = 7.470e-11
Identity = 50/191 (26.18%), Postives = 92/191 (48.17%), Query Frame = 0
Query:   43 KSGLYDLQQVKRLLDDEIMAFMEDQGYVESTTASNIKIVAGTVAVAAALYSHFGPGEFPANKPVVFACVAIYLVCVGLINISSFVLEASAIF-----VGSLSKRVKQVSKIALCDKVWIHSTIGGKGSSAYKVEIRQAPRSKHGSVSKSTPYE------KYITEDGHFLSSEFRIDMTALLSQLSPGSKKT 222
            K+ L D   +K +LD+ +   ++ +GY E    SN++++ G V +  AL++ F   +FP N+  + AC+ +Y+V  G++ +  +  E +AI      VGS +     VS      K+        + S  Y + I  A      SV+ + P E      ++ T+DG  +   F  D+ AL+++ +   KK+
Sbjct:   15 KANLLDQHSIKHILDESVSEIVKSRGYAEDVRMSNVRLLMGAVIIVIALFAQFYKKKFPENRDFLIACIGLYIVFNGILQLLIYTKEKNAIMFTYAPVGSFNSTGLVVS-----SKL-------PRFSDLYTLTIASADPK---SVAANKPVELTKSVTQWFTKDGILVEGLFSKDVDALINEYNKEPKKS 190          
BLAST of Gchil8235.t1 vs. uniprot
Match: A0A6P3ZE29_ZIZJJ (Signal peptidase complex subunit 2 n=1 Tax=Ziziphus jujuba TaxID=326968 RepID=A0A6P3ZE29_ZIZJJ)

HSP 1 Score: 68.9 bits (167), Expect = 7.470e-11
Identity = 48/183 (26.23%), Postives = 88/183 (48.09%), Query Frame = 0
Query:   43 KSGLYDLQQVKRLLDDEIMAFMEDQGYVESTTASNIKIVAGTVAVAAALYSHFGPGEFPANKPVVFACVAIYLVCVGLINISSFVLEASAIFVGSLSKRVKQVSKIALCDKVWIHSTIGGKGSSAYKVEIRQA-PRS--KHGSVSKSTPYEKYITEDGHFLSSEFRIDMTALLSQLSPGSKKT 222
            K+ L D   +K +LD+ +   +  +GYVE    SN++++ GTV +  AL++ F   +FP N+  + AC+ +Y+V  GL+ +     E +AI            + + +  K+        + S  Y + I  A P+S   H +V  +    ++ T+DG  +   F  D+ AL+ +     KK+
Sbjct:   15 KANLLDHHSIKHILDESVSEIVTGRGYVEDVRLSNVRLLLGTVIIVIALFAQFYKKKFPENRDFLIACIVLYIVFNGLLQLIIITKEKNAILFTYPPAGSFTSTGLVVSSKL-------PRFSDMYTLIIASADPKSISAHQTVQFTKSVTQWFTKDGILVEGLFWKDVEALIDEYVREPKKS 190          
BLAST of Gchil8235.t1 vs. uniprot
Match: A0A1S2XL02_CICAR (Signal peptidase complex subunit 2 n=1 Tax=Cicer arietinum TaxID=3827 RepID=A0A1S2XL02_CICAR)

HSP 1 Score: 67.8 bits (164), Expect = 1.760e-10
Identity = 50/188 (26.60%), Postives = 94/188 (50.00%), Query Frame = 0
Query:   43 KSGLYDLQQVKRLLDDEIMAFMEDQGYVESTTASNIKIVAGTVAVAAALYSHFGPGEFPANKPVVFACVAIYLVCVGLINISSFVLEASAIF-----VGSLSKRVKQVSKIALCDKVWIHSTIGGKGSSAYKVEIRQA-PRSKHGS--VSKSTPYEKYITEDGHFLSSEFRIDMTALLSQLSPGSKKT 222
            K+ L D   +K +LD+ +   +  +GYVE+   SN++++ G+V +  AL++ F   +FP N+  + AC+A+Y++  GL+ +  +  E +AI       GS +    +VS      K+        + S  Y + I  A P+S   +  V  +    ++ T+DG  +      D+ AL++Q +   KK+
Sbjct:    8 KANLLDHNSIKHILDESVSEVVTSRGYVENVKLSNVRLLIGSVIIIIALFAQFYKKKFPENRDFLIACIALYVIFNGLLQLIIYFKEKNAILFTYPLAGSFTSTGLEVS-----SKL-------PRFSDLYTLTIASADPKSISANEPVHLTKSVTEWFTKDGVLVEGLLWKDVEALIAQYTKEPKKS 183          
BLAST of Gchil8235.t1 vs. uniprot
Match: I1JI59_SOYBN (Signal peptidase complex subunit 2 n=12 Tax=50 kb inversion clade TaxID=2231393 RepID=I1JI59_SOYBN)

HSP 1 Score: 67.4 bits (163), Expect = 2.440e-10
Identity = 50/188 (26.60%), Postives = 92/188 (48.94%), Query Frame = 0
Query:   43 KSGLYDLQQVKRLLDDEIMAFMEDQGYVESTTASNIKIVAGTVAVAAALYSHFGPGEFPANKPVVFACVAIYLVCVGLINISSFVLEASAIF-----VGSLSKRVKQVSKIALCDKVWIHSTIGGKGSSAYKVEIRQA-PRS--KHGSVSKSTPYEKYITEDGHFLSSEFRIDMTALLSQLSPGSKKT 222
            K+ L D   +K +LD+ +   +  +G+VE    SN++++ G + +  AL++ F   +FP N+  + AC+A+Y++  GL+ +  +  E +AI      VGS +     VS      K+        + S  Y + I  A P+S   +  V  +    ++ T+DG  +   F  D+ AL+ Q +   KK+
Sbjct:    8 KANLLDHHSIKHILDESVSEVVTSRGFVEDVRLSNVRLLIGAIIIVIALFAQFYKKKFPENRDFLIACIALYVIFNGLLQLIIYTKEKNAILFTYPPVGSFTSTGLVVS-----SKL-------PRFSDMYTLTIASADPKSISANDQVHFTKSVTQWFTKDGVLVEGLFWKDVEALIVQYTKEPKKS 183          
BLAST of Gchil8235.t1 vs. uniprot
Match: A0A7S0BDC9_9RHOD (Signal peptidase complex subunit 2 n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BDC9_9RHOD)

HSP 1 Score: 67.8 bits (164), Expect = 2.520e-10
Identity = 54/185 (29.19%), Postives = 93/185 (50.27%), Query Frame = 0
Query:   41 LDKSGLYDLQQVKRLLDDEIMAFMEDQGYVESTTASNIKIVAGTVAVAAALYSHFGPGEFPANKPVVFACVAIYLVCVGLINISSFVLEAS---AIFVG-SLSKRVKQVSKIALCDKVWIHSTIGGKGSSAYKVEIRQAPRSKHGSVSKSTPYEKYITEDGHFLSSEFRIDMTALLSQLSPGSKK 221
            +DK  L+D Q VK+ LDD +M  ++ +GY ES        +  ++AVAAA+ SHF   +F   + ++  C+AI++VC  ++ I+  +  AS   A ++G S  KR+           +   ST+  K S  Y +++  + RS+   V ++  Y  Y T +G FL  +F   +   + +L     K
Sbjct:   26 VDKLVLHDTQFVKKHLDDFMMKVLKSEGYEESNLLVVTNFMVTSIAVAAAVCSHFVLKDFKTQQHLMILCIAIWMVCSLILGITERMYGASFSGASYIGFSDPKRMGTAPPFKF---ICATSTLP-KYSQEYMLKMTPS-RSRKPLVERNLRYNDYYTSNGQFLKEKFESQVKKAIQELISAKTK 205          
The following BLAST results are available for this feature:
BLAST of Gchil8235.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A2V3IQP8_9FLOR4.720e-9868.16Signal peptidase complex subunit 2 n=1 Tax=Gracila... [more]
R7Q936_CHOCR3.670e-6150.54Signal peptidase complex subunit 2 n=1 Tax=Chondru... [more]
A0A835YAC2_9CHLO9.760e-1432.02Signal peptidase complex subunit 2 n=1 Tax=Edaphoc... [more]
A0A383W038_TETOB6.700e-1229.48Signal peptidase complex subunit 2 n=1 Tax=Tetrade... [more]
A0A8J4QXU0_9ROSI2.840e-1127.42Uncharacterized protein n=2 Tax=Fagaceae TaxID=350... [more]
A0A059BHX2_EUCGR7.470e-1126.18Signal peptidase complex subunit 2 n=4 Tax=Myrtoid... [more]
A0A6P3ZE29_ZIZJJ7.470e-1126.23Signal peptidase complex subunit 2 n=1 Tax=Ziziphu... [more]
A0A1S2XL02_CICAR1.760e-1026.60Signal peptidase complex subunit 2 n=1 Tax=Cicer a... [more]
I1JI59_SOYBN2.440e-1026.60Signal peptidase complex subunit 2 n=12 Tax=50 kb ... [more]
A0A7S0BDC9_9RHOD2.520e-1029.19Signal peptidase complex subunit 2 n=1 Tax=Rhodoso... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009582Signal peptidase complex subunit Spc2/SPCS2PFAMPF06703SPC25coord: 52..212
e-value: 4.6E-26
score: 91.5
IPR009582Signal peptidase complex subunit Spc2/SPCS2PANTHERPTHR13085MICROSOMAL SIGNAL PEPTIDASE 25 KDA SUBUNITcoord: 36..216
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 7..36
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..36
NoneNo IPR availablePANTHERPTHR13085:SF0SIGNAL PEPTIDASE COMPLEX SUBUNIT 2coord: 36..216
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 136..223
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 106..135
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 77..94
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 95..105
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..76
NoneNo IPR availableTMHMMTMhelixcoord: 74..96
NoneNo IPR availableTMHMMTMhelixcoord: 106..128

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004384_piloncontigtig00004384_pilon:831111..831926 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8235.t1Gchil8235.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004384_pilon 831111..831926 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8235.t1 ID=Gchil8235.t1|Name=Gchil8235.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=224bp
MSRRARTSTQDESVSTDVTETSVRRSTSSASTSQSKSKAKLDKSGLYDLQ
QVKRLLDDEIMAFMEDQGYVESTTASNIKIVAGTVAVAAALYSHFGPGEF
PANKPVVFACVAIYLVCVGLINISSFVLEASAIFVGSLSKRVKQVSKIAL
CDKVWIHSTIGGKGSSAYKVEIRQAPRSKHGSVSKSTPYEKYITEDGHFL
SSEFRIDMTALLSQLSPGSKKTN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009582Spc2/SPCS2