Gchil8264.t2 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8264.t2
Unique NameGchil8264.t2
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length537
Homology
BLAST of Gchil8264.t2 vs. uniprot
Match: A0A2V3INH7_9FLOR (60S ribosomal export protein NMD3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INH7_9FLOR)

HSP 1 Score: 923 bits (2385), Expect = 0.000e+0
Identity = 451/531 (84.93%), Postives = 487/531 (91.71%), Query Frame = 0
Query:    1 MDSMDLDSSTARVSRTLPTILCCLCGVPITANPSNMCVSCIRSQVDITESIPKTSSIYYCKGCARYLQPPKHWMAAELESKELLTLCIKRLKGLNKVKLVDAGFQWTEPHSRRIRVRLLVQKEVFHNTILQQEFVVEFVVEYQQCDMCKRDAADIDEWQAVVQVRQKVVHKRTFLYLEQLIIKHGSHEDAVGIKAHPDGLDFYFLHRSHAMRFVSFLNHVVPVRTKQADHLVSHDANSNTYRYKYTFSVEILPLCKDDIVCLPPKVHVLLGGIGPLVLVTKVSTTISLIDPLTLQTAELSAPVYWKYQFPALMSFKQGTEFIVLDSEKTRERKGKWCVANATVARSIDYGKNDNQYYLSTHLGNFLNPGDLALGYDLGNAVYNESLLTGHKRLEMPDFLLFKKTYTKKNRSKRRAWRLKRLNMELDDSYVETGNRKSNLDPIARMAAEQEEFLQDLEQDQELRANINIYRDHTKPSQKASEMDVDLGTAAPVP-RNKSDAGHEGD--DEDYPEIPVEELLEGLNINDGPDE 528
            MDSMDLDSS     RTLPTILCCLCGVPITANPSNMC++CIR QVDITE+IPKTS+IYYCKGCARYLQPPKHW+AAELESKELL LCIKRLKGLNKVKLVDAGF+WTEPHSRRI+VRLLVQKEVF+NTILQQEF VEF+VEYQQCDMCKRDAADIDEWQAVVQVRQKVVHKRTFL+LEQLIIKHG+HED VGIKAHPDGLDFYFLHRSHAMRFVSFLNHVVP+RTKQADHLVSHD NSNTYRYKYTFSVEILPLCKDD+ CLPPKVHVLLGGIGPLVL+TKVST++SLIDP TLQTAEL+APVYWKY F ALMSFKQGTEF VLD EK+RERKGKWC+A+ TVARSIDYGKND+Q+Y+STHLGNFLNPGDLALGYDLGNAV+NESLL GHKRL++PDFLLFKKTY+KKNRSKRR WRLKRLNMELDD+ VET  RKSNLDPIARMAAEQEEFLQDLEQDQ+LR NINIYRD TK     S+MDVD G   P   +N+     +GD  DEDYPE+P+EELLEGLNI DGPD+
Sbjct:    1 MDSMDLDSSGVPPRRTLPTILCCLCGVPITANPSNMCINCIRGQVDITENIPKTSTIYYCKGCARYLQPPKHWVAAELESKELLALCIKRLKGLNKVKLVDAGFRWTEPHSRRIQVRLLVQKEVFNNTILQQEFFVEFIVEYQQCDMCKRDAADIDEWQAVVQVRQKVVHKRTFLFLEQLIIKHGAHEDTVGIKAHPDGLDFYFLHRSHAMRFVSFLNHVVPIRTKQADHLVSHDTNSNTYRYKYTFSVEILPLCKDDVACLPPKVHVLLGGIGPLVLITKVSTSLSLIDPFTLQTAELAAPVYWKYPFQALMSFKQGTEFAVLDVEKSRERKGKWCLADVTVARSIDYGKNDSQHYISTHLGNFLNPGDLALGYDLGNAVFNESLLAGHKRLQLPDFLLFKKTYSKKNRSKRRMWRLKRLNMELDDAVVETAYRKSNLDPIARMAAEQEEFLQDLEQDQDLRTNINIYRDPTKFKPIPSQMDVDQGNPVPAATQNRQVVAEDGDEDDEDYPEVPIEELLEGLNIEDGPDD 531          
BLAST of Gchil8264.t2 vs. uniprot
Match: R7QIK8_CHOCR (60S ribosomal export protein NMD3 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIK8_CHOCR)

HSP 1 Score: 808 bits (2086), Expect = 5.180e-291
Identity = 393/528 (74.43%), Postives = 457/528 (86.55%), Query Frame = 0
Query:    6 LDSSTARVSRTLPTILCCLCGVPITANPSNMCVSCIRSQVDITESIPKTSSIYYCKGCARYLQPPKHWMAAELESKELLTLCIKRLKGLNKVKLVDAGFQWTEPHSRRIRVRLLVQKEVFHNTILQQEFVVEFVVEYQQCDMCKRDAADIDEWQAVVQVRQKVVHKRTFLYLEQLIIKHGSHEDAVGIKAHPDGLDFYFLHRSHAMRFVSFLNHVVPVRTKQADHLVSHDANSNTYRYKYTFSVEILPLCKDDIVCLPPKVHVLLGGIGPLVLVTKVSTTISLIDPLTLQTAELSAPVYWKYQFPALMSFKQGTEFIVLDSEKTRERKGKWCVANATVARSIDYGKNDNQYYLSTHLGNFLNPGDLALGYDLGNAVYNESLLTGHKRLEMPDFLLFKKTYTKKNRSKRRAWRLKRLNMELDDSYVETGNRKS-NLDPIARMAAEQEEFLQDLEQDQELRANINIYRDHTKPSQKA--SEMDVDLGTAAPVPRNK----SDAGHEGDDEDYPEIPVEELLEGLNINDGP 526
            +D   A  + TLPTILCCLCG  IT+NPSNMCVSCIR QVDITESIPKT+SIYYCKGCARYLQPPKHW+A ELESKELLT+CIK+LKGLNKVKL+DAGF+WTEPHSRRI VRLLVQKEVF NTILQQEFVVEFVV+YQQCDMC+RDAAD+DEWQAVVQVRQKV HKRTFLYLEQLIIKH +HED VGIK HPDGLDFYF+HRS  +RF SFLNHVVP+R+KQADHLVSHDANSNTYRYKYTFSVEILP+CKDD+V LPPKV   LGGIGPLVLVTKVS  +++IDP TLQTAEL+A +YW+Y F ALMS KQ TEF ++D EK+ +RKGKWC+A+AT ARS+DYG NDNQ+++ TH+GNFL PGDLALGYD+GNAVYN++LL GHK+LE+PDF++FK+TY+KKNRSKRR WRLKRLNMELD+S V+TG+ K   +DPIA+MAAEQEEF+QDLEQD++LR+ INIY+D  K  Q A  ++MDVD G A P P  +    ++ G E   E+YPE+P+EELLEGL + D P
Sbjct:    1 MDGVAAPTTGTLPTILCCLCGTAITSNPSNMCVSCIRGQVDITESIPKTASIYYCKGCARYLQPPKHWVACELESKELLTICIKKLKGLNKVKLIDAGFRWTEPHSRRIHVRLLVQKEVFQNTILQQEFVVEFVVDYQQCDMCQRDAADLDEWQAVVQVRQKVQHKRTFLYLEQLIIKHSAHEDTVGIKVHPDGLDFYFMHRSQGIRFTSFLNHVVPIRSKQADHLVSHDANSNTYRYKYTFSVEILPICKDDLVVLPPKVATHLGGIGPLVLVTKVSQALTIIDPFTLQTAELAAALYWRYPFQALMSIKQATEFFIMDVEKSEDRKGKWCLADATAARSVDYGSNDNQHFIRTHIGNFLRPGDLALGYDIGNAVYNDNLLAGHKKLELPDFVIFKRTYSKKNRSKRRMWRLKRLNMELDESMVDTGSHKRVPMDPIAKMAAEQEEFMQDLEQDKDLRSTINIYKD-PKRIQPAGGTDMDVDEG-AQPKPVKQVVAAAEDGEEXXXEEYPEVPIEELLEGLVLEDEP 526          
BLAST of Gchil8264.t2 vs. uniprot
Match: UPI001E1DFF5E (LOW QUALITY PROTEIN: 60S ribosomal export protein NMD3-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DFF5E)

HSP 1 Score: 720 bits (1859), Expect = 1.550e-256
Identity = 351/535 (65.61%), Postives = 438/535 (81.87%), Query Frame = 0
Query:    4 MDLDSS--TARVSRTLPTILCCLCGVPITANPSNMCVSCIRSQVDITESIPKTSSIYYCKGCARYLQPPKHWMAAELESKELLTLCIKRLKGLNKVKLVDAGFQWTEPHSRRIRVRLLVQKEVFHNTILQQEFVVEFVVEYQQCDMCKRDAADIDEWQAVVQVRQKVVHKRTFLYLEQLIIKHGSHEDAVGIKAHPDGLDFYFLHRSHAMRFVSFLNHVVPVRTKQADHLVSHDANSNTYRYKYTFSVEILPLCKDDIVCLPPKVHVLLGGIGPLVLVTKVSTTISLIDPLTLQTAELSAPVYWKYQFPALMSFKQGTEFIVLDSEKTRERKGKWCVANATVARSIDYGKNDNQYYLSTHLGNFLNPGDLALGYDLGNAVYNESLLTGHKR-LEMPDFLLFKKTYTKKNRSKRRAWRLKRLNMELDDSYVETG--NRKSNLDPIARMAAEQEEFLQDLEQDQELRANINIYRD-HTKPSQKASEMDVDLGTAAPVPRNKSDAGHEGDDEDYPEIPVEELLEGLNINDGPDETNPN 532
            MD++S+      S TLPTILCC+CG  I  NP+NMCV+CIR +VDITESIPK SS+YYCKGCARYLQPPK+W+A ELESKELL+L IKRLKGL+KVKL+DAGF+WTEPHSRRI VRLLVQKEVF+NTILQQEF+VEF+V+YQQC MC+RDAADID+WQAVVQ RQKV HKRTFLY+EQLI+KH +HED +GIK HPDGLDFYFL RSHA++FVSFL+HVVP+R K +DHLVSHDANSN+YRY Y+FSVEI+P+C+DD++CLP K+    GGIGPLVLVT++S +I++IDP +L+TAELSA  YWK  F A+M  KQ TEF++LD E T +  G+W +A+ATVARS DYG+NDN Y + THLG FL+PGDLALGYDLGNAVYN++L+ GHK+ LE PD LL KKTY+K++R+++RAWRL RLNMELDD+       N++  +DP AR AA+ EEFLQ+LEQD+ELRA IN+Y+D   +   ++S   VD  +   V  +    G E D+++YPE+P+EELL+GL ++D PD  +PN
Sbjct:    1 MDVESTMEVEHASPTLPTILCCMCGTGIPPNPANMCVACIRGRVDITESIPKQSSVYYCKGCARYLQPPKNWVACELESKELLSLLIKRLKGLSKVKLIDAGFRWTEPHSRRIHVRLLVQKEVFNNTILQQEFIVEFIVDYQQCSMCQRDAADIDQWQAVVQARQKVPHKRTFLYVEQLILKHAAHEDTLGIKMHPDGLDFYFLSRSHALKFVSFLSHVVPIRQKMSDHLVSHDANSNSYRYNYSFSVEIVPICRDDVLCLPQKLSTAFGGIGPLVLVTRISQSITIIDPSSLRTAELSAAQYWKSPFAAMMGSKQATEFVILDIEPTGDENGRWLMADATVARSADYGQNDNTYLIRTHLGRFLHPGDLALGYDLGNAVYNDALVAGHKKALEFPDILLVKKTYSKRDRARKRAWRLARLNMELDDAVAAPASINKRGIMDPAAREAADHEEFLQELEQDKELRATINLYKDPEYRQKVESSGRIVDDASYGRVAGHSIAPGTEEDEDEYPEVPIEELLDGLVLDD-PDGGDPN 534          
BLAST of Gchil8264.t2 vs. uniprot
Match: A0A1X6NKH2_PORUM (60S ribosomal export protein NMD3 n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NKH2_PORUM)

HSP 1 Score: 606 bits (1562), Expect = 3.590e-211
Identity = 302/532 (56.77%), Postives = 391/532 (73.50%), Query Frame = 0
Query:    1 MDSMDLDSSTARVSRTLPTILCCLCGVPITANPSNMCVSCIRSQVDITESIPKTSSIYYCKGCARYLQPPKHWMAAELESKELLTLCIKRLKGLNKVKLVDAGFQWTEPHSRRIRVRLLVQKEVFHNTILQQEFVVEFVVEYQQCDMCKRDAADIDEWQAVVQVRQKVVHKRTFLYLEQLIIKHGSHEDAVGIKAHPDGLDFYFLHRSHAMRFVSFLNHVVPVRTKQADHLVSHDANSNTYRYKYTFSVEILPLCKDDIVCLPPKVHVLLGGIGPLVLVTKVSTTISLIDPLTLQTAELSAPVYWKYQFPALMSFKQGTEFIVLDSEKTRERKGKWCVANATVARSIDYGKNDNQYYLSTHLGNFLNPGDLALGYDLGNAVYNESLLTGHKR-LEMPDFLLFKKTYTKKNRSKRRAWRLKRLNMEL--DDSYVETGNRKSNLDPIARMAAEQEEFLQDLEQDQELRANINIYRDHTKPSQKASEMDVD--LGTAAPVPRNKSDAGHEGDDEDYPEIPVEELLEGLNINDGPD 527
            ++ +  + + A  + TL TI CCLCG  I  NPSNMC SC+R+QVDITE IPK  +IYYC+ C RYLQPPK W+AA+LES ELLTLCIKRLKGL++VKLVDAGF+WTEPHSRRI VRL +QKEVF  TILQQEF+VE+ V+YQQCD CKRDAA I  WQAVVQ RQKV HKRTF YLEQL++KHG+H+DA+GIK   DG+DFYF +RSHA++ ++FL  VVP+R K ++HLV+HD +SN+Y YKY+FS EI P+C+DD+V LPPK+   +GGIGPLVLV++VS+ +SL+DP  +QT +L A  +WK  F  LM+ +Q TE+ VLD E T E  GK+  A  TVARS D G ND+   + +HLG+ L+ GDL  GYD+ NAVYN+SLLTGHK   E+PD +L +KTY ++NR++ R WRL R+ +E+  DD+ V  G   +  DP  R A E+E FLQDLEQD ELRA++N+YR       + ++   +    T A VP        E DD++YPE+P+EELL+ L+++ G D
Sbjct:    5 VEQLSAEEAGAFSAGTLATIACCLCGTAIPPNPSNMCASCLRAQVDITEGIPKALAIYYCRNCGRYLQPPKAWIAADLESPELLTLCIKRLKGLSRVKLVDAGFRWTEPHSRRIHVRLTIQKEVFARTILQQEFIVEYTVQYQQCDACKRDAAKIAAWQAVVQARQKVDHKRTFYYLEQLLLKHGTHQDALGIKETGDGIDFYFANRSHAVKLLAFLGDVVPLRHKSSEHLVTHDTHSNSYNYKYSFSAEIAPVCRDDLVVLPPKLSASMGGIGPLVLVSRVSSAMSLVDPTAVQTTDLPAAAFWKTPFSPLMTSRQLTEYTVLDVETTGETSGKFAAAEVTVARSSDLGVNDSTVLVRSHLGHVLHIGDLVSGYDISNAVYNDSLLTGHKASFELPDVVLVRKTYPRRNRARGRKWRLARMAVEMADDDARVARGGAGAR-DPATRDAEEREGFLQDLEQDAELRAHVNLYRADGATGGEGADGGAEETAMTDADVPAGAGGDADEEDDDEYPEVPIEELLDALDLSKGRD 535          
BLAST of Gchil8264.t2 vs. uniprot
Match: A0A7S1TKE8_9RHOD (60S ribosomal export protein NMD3 n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TKE8_9RHOD)

HSP 1 Score: 573 bits (1476), Expect = 1.240e-198
Identity = 292/510 (57.25%), Postives = 376/510 (73.73%), Query Frame = 0
Query:   18 PTILCCLCGVPITANPSNMCVSCIRSQVDITESIPKTSSIYYCKGCARYLQPPKHWMAAELESKELLTLCIKRLKGLNKVKLVDAGFQWTEPHSRRIRVRLLVQKEVFHNTILQQEFVVEFVVEYQQCDMCKRDAADIDEWQAVVQVRQKVVHKRTFLYLEQLIIKHGSHEDAVGIKAHPDGLDFYFLHRSHAMRFVSFLNHVVPVRTKQADHLVSHDANSNTYRYKYTFSVEILPLCKDDIVCLPPKVHVLLGGIGPLVLVTKVSTTISLIDPLTLQTAELSAPVYWKYQFPALMSFKQGTEFIVLDSEKTRERKGKWCVANATVARSIDYGKNDNQYYLSTHLGNFLNPGDLALGYDLGNAVYNESLLTGHKR-LEMPDFLLFKKTYTKKNRSKRRAWRLKRLNMELDDSYVETGNRKSNLDPIARMAAEQEEFLQDLEQDQELRANINIYRDHTKPSQKASEMDVDLGTAAPVPRNKSDAGHEGDDED--YPEIPVEELLEGLNIND 524
            P +LCCLCGV + ANPS+MCV+C+RSQVDITE IPK S +Y+C+ C RY  PP++W+ A LESKELL L IK+L+GLNKVKLVDAGF+WTEPHSRRI VRL+VQKEVF +TILQQEF+VEFVVE  QCD CKRDAA+ID WQAVVQ RQKV HKRTF+YLEQ+I+KH +HEDA+G+K  PDGLD YFL+RSHA++F++F+  VVPVR   ++HL+SHDAN+NTYRYKY+FS EI PLC+DD+V LPPKV   LGGIGPLVLVTKV+  ++L+D  ++++ EL +  +WK +F  +++ ++  EF VLDSE T E  GK+ + + TV RS D G ND  YYL +HLG  LN GDL LGYD+GNA +N+ +L  HK+ +E+PD ++ +KTY +KNRS+RR W+L+ + M  D+S   TG      +       E+E FLQ+LE D ELRA IN+YRD T     A  M            +  D+ H   D+D  +PEIP+ ELLE L +N+
Sbjct:   25 PRMLCCLCGVVMDANPSSMCVNCLRSQVDITEGIPKQSVVYFCRQCERYHVPPRNWVYATLESKELLALLIKKLRGLNKVKLVDAGFKWTEPHSRRIVVRLVVQKEVFVSTILQQEFLVEFVVENMQCDTCKRDAANIDAWQAVVQARQKVDHKRTFMYLEQMILKHNAHEDALGVKQMPDGLDLYFLNRSHALKFLAFMASVVPVRHSCSEHLISHDANNNTYRYKYSFSAEISPLCRDDLVVLPPKVSAHLGGIGPLVLVTKVAQNVTLLDNRSMRSVELLSSYFWKNEFQPVLNSRRLIEFTVLDSEPTGEVYGKYVMTDLTVCRSSDLGVNDTTYYLRSHLGAHLNAGDLCLGYDVGNANFNDDILLQHKKTVELPDVVIVRKTYPRKNRSRRRRWKLRSIAM--DES---TGAMAEAGEVGGAEVDEREAFLQELETDPELRAGINLYRDATAVQADAGAM------------SDGDSAHRTSDDDDGFPEIPITELLEDLQLNE 517          
BLAST of Gchil8264.t2 vs. uniprot
Match: A0A7S0ZHW2_9RHOD (60S ribosomal export protein NMD3 n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZHW2_9RHOD)

HSP 1 Score: 570 bits (1470), Expect = 6.410e-198
Identity = 284/519 (54.72%), Postives = 386/519 (74.37%), Query Frame = 0
Query:   18 PTILCCLCGVPITANPSNMCVSCIRSQVDITESIPKTSSIYYCKGCARYLQPPKHWMAAELESKELLTLCIKRLKGLNKVKLVDAGFQWTEPHSRRIRVRLLVQKEVFHNTILQQEFVVEFVVEYQQCDMCKRDAADIDEWQAVVQVRQKVVHKRTFLYLEQLIIKHGSHEDAVGIKAHPDGLDFYFLHRSHAMRFVSFLNHVVPVRTKQADHLVSHDANSNTYRYKYTFSVEILPLCKDDIVCLPPKVHVLLGGIGPLVLVTKVSTTISLIDPLTLQTAELSAPVYWKYQFPALMSFKQGTEFIVLDSEKTRERKGKWCVANATVARSIDYGKNDNQYYLSTHLGNFLNPGDLALGYDLGNAVYNESLLTGHKRLEMPDFLLFKKTYTKKNRSKRRAWRLKRLNMELDDSYVE-TGNRKSNLDPIARMAAEQEEFLQDLEQDQELRANINIYRDHTKPSQKASEMDVDLGTAAPVPRNKSDAGHEGDDEDYPEIPVEELLEGLNINDGPDETNPNSTL 535
            P +LCCLCG  I +NP++MCV+C+RSQVDITE IPK SS+Y+CK C RY  PPK+W+  +LESKELL L IKRL+GLNKVKLVDAGF+WTEPHSRRI VRL VQKEVF NTILQQEF+VEFVVE+ QCD CKRDAA+ID WQAVVQ RQKV HKR+F+YLEQLI+K  +HEDA+GIK   DG+DFYFL++SHA++F++F+  VVPVR   ++HL+SHDAN+N+YRYKY+FS EI PLC+DD+V LPPKV   +GG GPL+LV +VS  ++L+D  T++T +L +  YWK +F +L++ ++ TEF VLDSE T E  GK+ + + TV RS+D G ND  YY+ +HLG FLN GDL LGYD+ N+ +N+  LT +K++E+PD ++ +KTY K+NR+++R W+L+ L ++  +  V+ T   +  +D       E+E FLQ+LEQD E R  +N+Y+D    + KA+E   D+ T A            G+++++P+IP+ ELL+ L ++D  D++   S L
Sbjct:   12 PKVLCCLCGTLIDSNPASMCVNCLRSQVDITEGIPKQSSVYFCKMCERYHVPPKNWVYVQLESKELLALLIKRLRGLNKVKLVDAGFKWTEPHSRRILVRLSVQKEVFLNTILQQEFLVEFVVEHMQCDSCKRDAANIDAWQAVVQARQKVSHKRSFMYLEQLILKQNAHEDALGIKELADGIDFYFLNKSHALKFLAFMGSVVPVRHSVSEHLISHDANNNSYRYKYSFSAEISPLCRDDLVVLPPKVSTHMGGAGPLMLVVRVSQNVTLLDIRTMRTVDLLSAYYWKNEFSSLLNSRRLTEFTVLDSEPTGEVIGKYVITDLTVCRSVDLGSNDTVYYVRSHLGAFLNAGDLCLGYDVSNSNFNDDTLTQYKKIELPDIVIVRKTYPKRNRTRKRKWKLRSLAVDRSEELVKPTRTGQGEVD-------EREIFLQELEQDAEFRQAVNLYKDGG--AIKAAE---DIMTDA-----------SGEEDEFPDIPITELLDDLQLDDAEDDSETVSDL 507          
BLAST of Gchil8264.t2 vs. uniprot
Match: A0A5J4YI00_PORPP (60S ribosomal export protein NMD3 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YI00_PORPP)

HSP 1 Score: 572 bits (1473), Expect = 8.160e-198
Identity = 295/533 (55.35%), Postives = 381/533 (71.48%), Query Frame = 0
Query:    1 MDSMDLDSSTARVS---RTLPTILCCLCGVPITANPSNMCVSCIRSQVDITESIPKTSSIYYCKGCARYLQPPKHWMAAELESKELLTLCIKRLKGLNKVKLVDAGFQWTEPHSRRIRVRLLVQKEVFHNTILQQEFVVEFVVEYQQCDMCKRDAADIDEWQAVVQVRQKVVHKRTFLYLEQLIIKHGSHEDAVGIKAHPDGLDFYFLHRSHAMRFVSFLNHVVPVRTKQADHLVSHDANSNTYRYKYTFSVEILPLCKDDIVCLPPKVHVLLGGIGPLVLVTKVSTTISLIDPLTLQTAELSAPVYWKYQFPALMSFKQGTEFIVLDSEKTRE-------RKGKWCVANATVARSIDYGKNDNQYYLSTHLGNFLNPGDLALGYDLGNAVYNESLLTGHKRL-EMPDFLLFKKTYTKKNRSKRRAWRLKRLNMELDDSYVETGNRKSNLDPIARMAAEQEEFLQDLEQDQELRANINIYRDHTKPSQKASEMDVDLGTAAPVPRNKSDAGHEGDDEDYPEIPVEELLEGLNI 522
            M + D D +  R +    ++P +LCCLCGV I ANP+ MC +C+RSQVDITE IPK S +Y+CK C RY  PP++W+  ELESKELL L IKRLKGLNKVKLVDAGF+WTEPHSRRI VRL VQKEVF +T+LQQEF++EFVVE+ QCD CKRDAA++D W AVVQ+RQKV HKRTF+YLEQLI+KH +HEDA+G+K  PDGLDFYF+ RSHA +F+ F+  VVP+R K ++HL+SHD ++NT+RYKY+FS EI PLC+DD+V LPPKV   LGGIGPLVLV +V+  + ++D  T +TAE+S+P YWK +F A++  ++ TEF VLDSE T E             V + TV RS D G  D QY++ +HLG+ L  GDL LGYD+ NA  NE L+TGHK+L ++PD +L +KTY K+NR++ R W+L+RL ME        G+  SN +       E E F+Q+LEQD E+R+++N+Y     P   A + D  L       R+ S A  E +DEDYP++PV ELLEGL I
Sbjct:   12 MHASDTDQAGGRAAAFVESVPRVLCCLCGVLIDANPAGMCANCLRSQVDITEGIPKQSVVYFCKFCERYHVPPRNWVRCELESKELLALLIKRLKGLNKVKLVDAGFKWTEPHSRRIIVRLCVQKEVFTSTVLQQEFLIEFVVEHLQCDSCKRDAANMDAWTAVVQLRQKVDHKRTFMYLEQLILKHNAHEDAIGMKNMPDGLDFYFMVRSHANKFLHFVTSVVPLRHKTSEHLISHDESNNTFRYKYSFSAEISPLCRDDLVVLPPKVAAHLGGIGPLVLVLRVAQNVLVMDVRTFRTAEVSSPYYWKNEFGAILGSRRLTEFTVLDSEPTGEILPGGAGSNKNIVVTDVTVCRSADLGMVDRQYFVRSHLGHHLQAGDLCLGYDIENANVNEDLMTGHKKLVDLPDVVLVRKTYPKRNRARTRRWKLRRLAMEEQQXXXXRGSGASNEED------EHELFMQELEQDPEMRSHVNLYMQAKDPVVVAQD-DNSLAM-----RDDSGAEDEEEDEDYPDVPVTELLEGLAI 532          
BLAST of Gchil8264.t2 vs. uniprot
Match: A0A7S3EE79_9RHOD (60S ribosomal export protein NMD3 n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EE79_9RHOD)

HSP 1 Score: 560 bits (1443), Expect = 4.230e-194
Identity = 281/525 (53.52%), Postives = 378/525 (72.00%), Query Frame = 0
Query:    4 MDLDSSTARVSRTLPTILCCLCGVPITANPSNMCVSCIRSQVDITESIPKTSSIYYCKGCARYLQPPKHWMAAELESKELLTLCIKRLKGLNKVKLVDAGFQWTEPHSRRIRVRLLVQKEVFHNTILQQEFVVEFVVEYQQCDMCKRDAADIDEWQAVVQVRQKVVHKRTFLYLEQLIIKHGSHEDAVGIKAHPDGLDFYFLHRSHAMRFVSFLNHVVPVRTKQADHLVSHDANSNTYRYKYTFSVEILPLCKDDIVCLPPKVHVLLGGIGPLVLVTKVSTTISLIDPLTLQTAELSAPVYWKYQFPALMSFKQGTEFIVLDSEKTRERKGKWCVANATVARSIDYGKNDNQYYLSTHLGNFLNPGDLALGYDLGNAVYNESLLTGHKRLEMPDFLLFKKTYTKKNRSKRRAWRLKRLNMELDDSYVETGNRKSNLDPIARMAAEQEEFLQDLEQDQELRANINIYRDHTKPSQKASEMDVDLGTAAPVPRNKSDAGHEGDDEDYPEIPVEELLEGLNINDGPDE 528
            M++  +T R       ILCC CG PI  N +NMC++CIR +VDITE IPK S++YYC+ CARYLQPPK W+ AELESKELL L IKRL+GLNKVKL+DA F+WTEPHSRRI +RL +QKEVF NTIL+  F VEFVV YQQC+ C+RDAA ID WQAVVQVRQKV HKR+F+YLEQLI+KHG+HE+A+GIK   DG+DF+F+ +S A++FVSFL  V+P++ K ++HLVSHD  SN +RYKYTFSV+I P+CKDD+VCLP K+    GG+GP+V+V++VS +I + DP +L+ AE++  VYW+Y F +LM+ +Q  E+ +LD E T E  G+   A  T A+S D+G NDN     +HLG  L+ GD++LGYDL +A YNE+L+ GHK LE+ D +L KKTY + NR +RR W+LK + ++ D+  V+ GN +  LD        +E+FL++LEQD +LR  +NIY+D   P+ + +  D +                    ++YP+IP++EL++GLNI DGPDE
Sbjct:    1 MEISGATTR-----SLILCCNCGAPIEPNAANMCLNCIRGRVDITEGIPKKSTVYYCRQCARYLQPPKFWLVAELESKELLGLLIKRLRGLNKVKLIDASFKWTEPHSRRIIIRLTIQKEVFLNTILEDSFTVEFVVLYQQCERCRRDAAKIDAWQAVVQVRQKVEHKRSFMYLEQLILKHGAHEEALGIKQMSDGIDFFFISKSAALKFVSFLQQVMPIKHKSSEHLVSHDPKSNHFRYKYTFSVDIAPVCKDDLVCLPLKLSQSFGGLGPIVIVSRVSQSIVVTDPTSLRHAEIAPNVYWRYGFVSLMNSRQLVEYTILDVENTGEASGRNQGAYITAAKSSDFGANDNVVLTRSHLGAHLSSGDISLGYDLKSANYNEALIEGHKHLELEDCVLVKKTYPRMNR-RRRKWKLKSMVVDADEQ-VDRGNDREELD--------REQFLRELEQDPDLRLGVNIYKD---PAAEDAMTDAETNP-----------------DEYPDIPLDELIDGLNIEDGPDE 490          
BLAST of Gchil8264.t2 vs. uniprot
Match: F4PYE7_CAVFA (60S ribosomal export protein NMD3 n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PYE7_CAVFA)

HSP 1 Score: 516 bits (1330), Expect = 1.860e-176
Identity = 264/512 (51.56%), Postives = 363/512 (70.90%), Query Frame = 0
Query:   20 ILCCLCGVPITANPSNMCVSCIRSQVDITESIPKTSSIYYCKGCARYLQPPKHWMAAELESKELLTLCIKRLKGLNKVKLVDAGFQWTEPHSRRIRVRLLVQKEVFHNTILQQEFVVEFVVEYQQCDMCKRDAADIDEWQAVVQVRQKVVHKRTFLYLEQLIIKHGSHEDAVGIKAHPDGLDFYFLHRSHAMRFVSFLNHVVPVRTKQADHLVSHDANSNTYRYKYTFSVEILPLCKDDIVCLPPKVHVLLGGIGPLVLVTKVSTTISLIDPLTLQTAELSAPVYWKYQFPALMSFKQGTEFIVLDSEKTRERKGKWCVANATVARSIDYGKNDNQYYLSTHLGNFLNPGDLALGYDLGNAVYNESLLTG---HKRLEMPDFLLFKKTYTKKNRSKRRAWRLKRLNMELDDSYVETGNRKSNLDPIARMAAEQEEFLQDLEQDQELRANINIYRDHTKPSQKASEMDVDLGTAAPVPR----NKSDAGHEGDDEDYPEIPVEELLEGLNIND 524
            ILCC+CGV I ANPSNMCV CIRSQVDITE IPK   + +C+GC RYLQPP HW A ELES+ELLTLCIKR+KGL KVKLVDAG+ WTEPHSRR++V+L +QKEVF + ILQQ F+VEFVV  QQC  C+R  A  D W AVVQ+RQKV HKRTFL+LEQ+I+KH +H  A+ IK   DGLDFYF +++HA +FV F++ + PVR+K+++ L+SHD  +NT  +K++ SVEI+PLCKDD+VCLPPK+   LGGIGP+VLVTKVS  I +IDP +LQTAE+S+  +W   F A+  +KQ  EF VLD   T ERKGK+ +A+  + RS D+G NDN +++ THLG+  N GDLALGYDL  A++N+S +     H+   +P+ +L KKT+   +  K+R W ++ +N E  ++      RK++++   R   +Q++F++++E+D ++R+ INIY+                G AA + +    +K D+G+E  D +  E+ +EELL+ ++IND
Sbjct:   12 ILCCICGVLIAANPSNMCVDCIRSQVDITEGIPKQLMVQWCRGCNRYLQPPNHWAACELESRELLTLCIKRIKGLTKVKLVDAGWVWTEPHSRRLKVKLTIQKEVFASAILQQVFIVEFVVSGQQCTSCQRLDAK-DTWNAVVQLRQKVDHKRTFLFLEQVILKHNAHSQALNIKERSDGLDFYFANKNHASKFVEFISAIAPVRSKKSEQLISHDEQNNTANHKHSNSVEIVPLCKDDLVCLPPKLMTSLGGIGPIVLVTKVSNVIHIIDPNSLQTAEISSTSFWNTPFRAITGYKQMIEFTVLDVSLTGERKGKFALADVQLVRSSDFGVNDNTFFVRTHLGHLFNAGDLALGYDLSTAIFNDSDMEAIGKHRSANIPEIVLVKKTFPVTD-LKQRHWTIRNMNKEGQENI-----RKNDVEKAER---DQQDFVREIEEDADMRSKINIYKQ---------------GNAAEILKQRIKHKKDSGYE--DHEINEVTLEELLDEMDIND 496          
BLAST of Gchil8264.t2 vs. uniprot
Match: F0Z7S0_DICPU (60S ribosomal export protein NMD3 n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0Z7S0_DICPU)

HSP 1 Score: 509 bits (1311), Expect = 1.060e-173
Identity = 252/454 (55.51%), Postives = 336/454 (74.01%), Query Frame = 0
Query:   20 ILCCLCGVPITANPSNMCVSCIRSQVDITESIPKTSSIYYCKGCARYLQPPKHWMAAELESKELLTLCIKRLKGLNKVKLVDAGFQWTEPHSRRIRVRLLVQKEVFHNTILQQEFVVEFVVEYQQCDMCKRDAADIDEWQAVVQVRQKVVHKRTFLYLEQLIIKHGSHEDAVGIKAHPDGLDFYFLHRSHAMRFVSFLNHVVPVRTKQADHLVSHDANSNTYRYKYTFSVEILPLCKDDIVCLPPKVHVLLGGIGPLVLVTKVSTTISLIDPLTLQTAELSAPVYWKYQFPALMSFKQGTEFIVLDSEKTRERKGKWCVANATVARSIDYGKNDNQYYLSTHLGNFLNPGDLALGYDLGNAVYNESLLTGHKRLE-MPDFLLFKKTYTKKNRSKRRAWRLKR--LNMELDDSYVETGNRKSNLDPIARMAAEQEEFLQDLEQDQELRANINIYR 470
            ILCC+CGV I ANPSNMCV CI+SQVDIT+ IPK  +I +C+GC RYLQPP HW  A+LES+ELLT+CIKR+KGLNKVKLVDAG+ WTEPHS+R++V+L +QKEVF + ILQQ F+VEFVV+ QQCD C++  A  D W +VVQ+RQKV HKRTFL++EQLI+KH +H   + IK  PDGLDF+F +R+HAM+FV F++ + PV+TK+++ L+S D  +N   YK+TFSVEI+PL KDDIVCLPPK+   LG +GPLV+VTKVS  I  IDP TLQT E+SA  +W   F AL S+KQ  EF +LD   T E +G++ +A+  + RS+D+G NDN + + +HLGN LNPGDLALGYD+  ++YN+S L G K+ + +PDF+L KKTY  KN      +R KR     +++   +E   +      I RM  ++E+FL ++E+D E+R+ INIY+
Sbjct:    4 ILCCMCGVLIPANPSNMCVDCIKSQVDITDGIPKQLTIQWCRGCDRYLQPPNHWAIADLESRELLTICIKRIKGLNKVKLVDAGWVWTEPHSKRLKVKLTIQKEVFTSAILQQIFIVEFVVQGQQCDKCQKFEAK-DTWNSVVQLRQKVDHKRTFLFIEQLILKHNAHSQTLNIKEKPDGLDFFFSNRNHAMKFVDFISCITPVKTKKSEQLISSDEQNNAANYKFTFSVEIVPLSKDDIVCLPPKIAHQLGNMGPLVVVTKVSNLIHFIDPNTLQTGEISALTFWNSPFRALSSYKQLVEFTILDVNLTGETRGRFALADIQLMRSVDFGANDNMHDIRSHLGNILNPGDLALGYDVSTSIYNDSDLIGLKKNKYLPDFVLVKKTYPGKN-----DFRFKRHYYYKQIEKEGIENPKKFD----IERMERDKEDFLNEIEEDPEMRSKINIYK 447          
The following BLAST results are available for this feature:
BLAST of Gchil8264.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3INH7_9FLOR0.000e+084.9360S ribosomal export protein NMD3 n=1 Tax=Gracilar... [more]
R7QIK8_CHOCR5.180e-29174.4360S ribosomal export protein NMD3 n=1 Tax=Chondrus... [more]
UPI001E1DFF5E1.550e-25665.61LOW QUALITY PROTEIN: 60S ribosomal export protein ... [more]
A0A1X6NKH2_PORUM3.590e-21156.7760S ribosomal export protein NMD3 n=1 Tax=Porphyra... [more]
A0A7S1TKE8_9RHOD1.240e-19857.2560S ribosomal export protein NMD3 n=1 Tax=Erythrol... [more]
A0A7S0ZHW2_9RHOD6.410e-19854.7260S ribosomal export protein NMD3 n=1 Tax=Timspurc... [more]
A0A5J4YI00_PORPP8.160e-19855.3560S ribosomal export protein NMD3 n=1 Tax=Porphyri... [more]
A0A7S3EE79_9RHOD4.230e-19453.5260S ribosomal export protein NMD3 n=3 Tax=Rhodosor... [more]
F4PYE7_CAVFA1.860e-17651.5660S ribosomal export protein NMD3 n=1 Tax=Cavender... [more]
F0Z7S0_DICPU1.060e-17355.5160S ribosomal export protein NMD3 n=1 Tax=Dictyost... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007064Nmd3, N-terminalPFAMPF04981NMD3coord: 22..251
e-value: 6.2E-80
score: 268.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 470..536
NoneNo IPR availablePANTHERPTHR12746:SF260S RIBOSOMAL EXPORT PROTEIN NMD3coord: 10..521
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..31
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 16..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 28..31
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..536
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..15
IPR039768Ribosomal export protein Nmd3PANTHERPTHR12746NONSENSE-MEDIATED MRNA DECAY PROTEIN 3coord: 10..521

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004384_piloncontigtig00004384_pilon:966284..967894 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8264.t2Gchil8264.t2Gracilaria chilensis NLEC103_M9 malemRNAtig00004384_pilon 966284..967894 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8264.t2 ID=Gchil8264.t2|Name=Gchil8264.t2|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=537bp
MDSMDLDSSTARVSRTLPTILCCLCGVPITANPSNMCVSCIRSQVDITES
IPKTSSIYYCKGCARYLQPPKHWMAAELESKELLTLCIKRLKGLNKVKLV
DAGFQWTEPHSRRIRVRLLVQKEVFHNTILQQEFVVEFVVEYQQCDMCKR
DAADIDEWQAVVQVRQKVVHKRTFLYLEQLIIKHGSHEDAVGIKAHPDGL
DFYFLHRSHAMRFVSFLNHVVPVRTKQADHLVSHDANSNTYRYKYTFSVE
ILPLCKDDIVCLPPKVHVLLGGIGPLVLVTKVSTTISLIDPLTLQTAELS
APVYWKYQFPALMSFKQGTEFIVLDSEKTRERKGKWCVANATVARSIDYG
KNDNQYYLSTHLGNFLNPGDLALGYDLGNAVYNESLLTGHKRLEMPDFLL
FKKTYTKKNRSKRRAWRLKRLNMELDDSYVETGNRKSNLDPIARMAAEQE
EFLQDLEQDQELRANINIYRDHTKPSQKASEMDVDLGTAAPVPRNKSDAG
HEGDDEDYPEIPVEELLEGLNINDGPDETNPNSTLS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007064Nmd3_N
IPR039768Nmd3