Gchil8290.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8290.t1
Unique NameGchil8290.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length555
Homology
BLAST of Gchil8290.t1 vs. uniprot
Match: A0A2V3IXS8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXS8_9FLOR)

HSP 1 Score: 308 bits (789), Expect = 1.470e-93
Identity = 237/564 (42.02%), Postives = 320/564 (56.74%), Query Frame = 0
Query:    1 MNLRERLAALRSRRTSSKLDIPSQLVLNSPSPKG---TPSKKSRLHSEAARRQWHQQQLHNAARKARQNVMETGLYDVLTRAPPPEKVVPPLVKEEKQADAQPSDSEDEDEEGEHVEIDEEQMEIYEEERALQHANRQLLFDDHSVPES-SKLSLDQPRKDITAHSCEKKVVLESPDTAELQYSEQV--DDPDPIHKEQPTTNMTTSPVSVPDHPPSFAGPNALQSGPHQSQQ---LKEQHTVSKENNRSPQNEDPTISSVKANT------RLAPLQDTSPQ------TPDQPALKGAEKKDA-------LRFLCNDRLSNPLGIVDEEADEE----NAGGNGAVSHELEAIDSDGDDDCIDHDEVAPSAIDRNNLAQFHRMWQLDKDKNDLAVAAAGGVVDDIDDAVDLTELLHKEEQTAKDNESEHDGSVFGAAPVSNEVDETKQQSEQYMEQMFQRDDSRSRIIDNINEDAEDDQKREKARALWKARQKAKAILQR-DNDSLSKFDLFDSNSKSRSADFRQKLEKTCRRSSPHLQSRNENNKRNNSWLAESTLSAWEKQRR 531
            MNLRE+LAALRSRR ++   +P+++    P+PK    T  ++ R  S AARRQW  QQL NAARKARQNV+ETGLYDV+TRAPPPE+V P +V  E+  + Q                               +ANRQL  DD  +P++ S+   D+ +K               P + E++  +Q+  +  D I K +   ++T     + D     A  N  QS   + Q     K+ +     N RS     P     + N       R   +QDTSP+      TP  P+ + A  + A       +R    +  +NPLG+VD+EADEE    +  G     HE    +SD +DD ID++E+ P + DR  LAQFHR W+L+K+K D+A AAAGGVVDDID+AVDLT+L+ KEEQ  KDNESE  GSV GA   S E  E ++QS+ Y++QMF RDDS+S+++D++ ED E  QKREKAR LWKARQKAKA+ Q+ DNDSLS+FD FD  + + SAD R KLE  CRR+S   +      KR +SWL  ST+S WEK+R+
Sbjct:    1 MNLREKLAALRSRRANNSA-LPAEIA---PAPKAATRTSPRQGRSFSVAARRQWQHQQLKNAARKARQNVIETGLYDVITRAPPPEEVKP-IVPPERPDNTQDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNANRQLFMDDDDLPKNDSRRPGDEDQK--------------QPRSQEIKDQQQLTAESNDSISKSKDANSLTNRNSELKDPADPSASKNEDQSVDVKDQSEASAKDDNHAFTNNERSGAQPGPFDKPSEQNADRSEKQRPETVQDTSPESPIPSSTPCTPSPQKAPHQQARKRKTTFIRLYDAEPPTNPLGMVDDEADEEAIDQDDQGLYGDYHESHLPESDAEDDGIDNEEITPKSCDRAKLAQFHRQWELEKEKADVANAAAGGVVDDIDEAVDLTDLMRKEEQVQKDNESEDGGSVSGAM-ASGEAQEHQRQSDDYIKQMFLRDDSKSKMLDDLEEDIEIGQKREKARLLWKARQKAKAVRQKQDNDSLSRFDFFDKGAVTCSADIRHKLENACRRASAQPRGDENGKKRKSSWLKGSTMSNWEKRRK 544          
BLAST of Gchil8290.t1 vs. uniprot
Match: R7QBY6_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QBY6_CHOCR)

HSP 1 Score: 72.4 bits (176), Expect = 9.600e-11
Identity = 49/120 (40.83%), Postives = 70/120 (58.33%), Query Frame = 0
Query:  425 FQRDDSRSRIIDNINEDAEDD-----QKREKARALWKARQKAK-AILQRDNDSLSKFDLFDSNSKSRSADFRQKLEKTCR---------RSSPHLQSRNENNKRNNSWLAESTLSAWEKQ 529
            F RDDSRSR ++   ++ E+       KR+KARALWKARQK+K ++   D +SLS+FD+F    KSRS  FR+KLE  CR         RS       N   KR++ W  ++++  WE++
Sbjct:    4 FLRDDSRSRNLEGDEQEKEESGDEKTAKRDKARALWKARQKSKTSLFLEDENSLSRFDIFGDADKSRSTHFREKLESACRPASLKDIDDRSKSGRDQNNTGKKRSSPWALDASVPEWERR 123          
The following BLAST results are available for this feature:
BLAST of Gchil8290.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IXS8_9FLOR1.470e-9342.02Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QBY6_CHOCR9.600e-1140.83Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 115..135
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 488..538
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 488..506
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 192..206
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 217..271
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 299..325
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 16..37
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 78..282
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 507..523
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 384..431
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..65
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 409..423
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 150..171
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 99..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004384_piloncontigtig00004384_pilon:1170917..1172751 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8290.t1Gchil8290.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004384_pilon 1170917..1172751 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8290.t1 ID=Gchil8290.t1|Name=Gchil8290.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=555bp
MNLRERLAALRSRRTSSKLDIPSQLVLNSPSPKGTPSKKSRLHSEAARRQ
WHQQQLHNAARKARQNVMETGLYDVLTRAPPPEKVVPPLVKEEKQADAQP
SDSEDEDEEGEHVEIDEEQMEIYEEERALQHANRQLLFDDHSVPESSKLS
LDQPRKDITAHSCEKKVVLESPDTAELQYSEQVDDPDPIHKEQPTTNMTT
SPVSVPDHPPSFAGPNALQSGPHQSQQLKEQHTVSKENNRSPQNEDPTIS
SVKANTRLAPLQDTSPQTPDQPALKGAEKKDALRFLCNDRLSNPLGIVDE
EADEENAGGNGAVSHELEAIDSDGDDDCIDHDEVAPSAIDRNNLAQFHRM
WQLDKDKNDLAVAAAGGVVDDIDDAVDLTELLHKEEQTAKDNESEHDGSV
FGAAPVSNEVDETKQQSEQYMEQMFQRDDSRSRIIDNINEDAEDDQKREK
ARALWKARQKAKAILQRDNDSLSKFDLFDSNSKSRSADFRQKLEKTCRRS
SPHLQSRNENNKRNNSWLAESTLSAWEKQRREDTKEECANAYPKLGRSLC
EQSE*
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