Gchil8304.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8304.t1
Unique NameGchil8304.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length630
Homology
BLAST of Gchil8304.t1 vs. uniprot
Match: A0A2V3ISS3_9FLOR (NOT2_3_5 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISS3_9FLOR)

HSP 1 Score: 789 bits (2037), Expect = 5.070e-280
Identity = 442/676 (65.38%), Postives = 503/676 (74.41%), Query Frame = 0
Query:    1 MSHLYYAYGAENAAGSPPSVHPPHPPHRRSPQAWSVDPRRAAAPLPLSQFTDLSAAPAQPLSTAALMNSARPVPPSSRPTPYDDNLFHVMGKGFADPSQPQPASSPSSRPPQQQPPFTQPHPPRTAVFDPSEFPSLGAVGAHAAMQPVSSSFLDNNPSIDHNLTNPSLSAPNLNGMPHYQDLYSLGAYADSRVKAVDALTGSSAPSEFTIQSEDFPALGG-ASASAALRQVNASAAIANGA--YQIDTSALRASLQKAPLTESFYDRKVSSVSSLPQTVLGRVNVRQDASRIPQRGARLPNGYTATDAMSSMPSLQQMHYAPNSHVTSQQ-AFRDLTSTSPTPSALSAAANRPQLFQTRTRQPDLGRRFEEYELLDSRESASRLNMLSQSSKPILHQESRFSRSRMPNGQSPNTSEPHVLPSHSRGNGGND-----------------------PNTRGSGP-------------------FRSDKFGMLSLLPLVSSGGNITRKDRVLPIGIDLTALGLNLNSHEPLYKTFHNPWEGGQGKSGDADTAGSSQKGQEPEYRLPTCYYMQPPALRTNHFTKFQLETLFYIFYIMPHDVLQLLAAVELYSRKWRYHKTLKLWFTC-DVEARSGYEGGYIYFDIKSWGKREFHEVNDNQSFIKGFMTEEELASVKIPPL 629
            MSHLYY YGAENAA SPPSV   HP HRRSPQAWS DPRR +A L LSQ  DLS++P Q LSTA LMNSARPVPPSSRPT YDDNLF +MGKGF D SQP P+ SP  R PQQ PP+ Q H P T VFDPS+FPSLG VGAH ++QP SSS LD N SIDH LTNPSLSAP LNGMP YQDLYSLGAYADSRVKAVDALTGSSAPSEF++QSEDFPALGG ASAS ALR VNA  A+ANGA  +QIDTS++R SL K+ + +SFYDRK+S+VSS P ++LGR NVRQDASR+ QR  RLPNGY   D MS+MP     H+   SH+  QQ AFR ++STSP  SA +AA++   LFQ RTRQ D+ RR E++E +D RE+ S  N+   ++K  L  +SR SRSR+PNGQS       +L S  +GN   D                       P +  + P                   F S+KFGMLSLLPLVS+ G+  R+DRVLPIG+DLTALGLNL+S EPLYKTF+NPWEGGQGKSGD D +GSSQK QEP++RLPTCYYMQ PALRTNHFTKFQLETLFYIFYIMPHDVL+LLAAVELY R WRYHKTLKLWFT  ++E  SGYEGGYIYFDIKSWGKREFHE N  QSFIKGFMT+EEL +V+IPPL
Sbjct:    1 MSHLYYTYGAENAASSPPSVQQ-HPAHRRSPQAWSADPRRPSAQLSLSQLADLSSSPPQSLSTA-LMNSARPVPPSSRPTAYDDNLFQIMGKGFNDHSQPYPSQSPPLRAPQQAPPYPQAHQPST-VFDPSDFPSLGTVGAHPSIQPSSSSILDTNASIDHTLTNPSLSAPTLNGMPPYQDLYSLGAYADSRVKAVDALTGSSAPSEFSMQSEDFPALGGGASASTALRPVNAQPALANGAAPFQIDTSSMRTSLTKSSVPDSFYDRKLSAVSSQPHSILGRANVRQDASRMQQRTTRLPNGYAVNDTMSAMPP----HHPSTSHLAQQQHAFRAMSSTSPRRSAATAASHAQPLFQVRTRQLDVERRPEQHEPVDVREAPSLHNLPIHNTKATLQPDSRLSRSRLPNGQSSGAVASDILASVVKGNATEDFTATMSASAPITGLAPASAQTSIPTSAPTPPSASIXXXXXXXXXXXXXTAFPSEKFGMLSLLPLVSTSGSNARQDRVLPIGVDLTALGLNLSSTEPLYKTFYNPWEGGQGKSGDLDFSGSSQKNQEPDFRLPTCYYMQAPALRTNHFTKFQLETLFYIFYIMPHDVLELLAAVELYKRNWRYHKTLKLWFTSPELEKNSGYEGGYIYFDIKSWGKREFHEAN--QSFIKGFMTQEELGAVRIPPL 667          
BLAST of Gchil8304.t1 vs. uniprot
Match: R7QRK3_CHOCR (NOT2_3_5 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRK3_CHOCR)

HSP 1 Score: 280 bits (716), Expect = 7.030e-84
Identity = 210/573 (36.65%), Postives = 282/573 (49.21%), Query Frame = 0
Query:   67 MNSARPVPPSSRPTP-YDDNLFHVMGKGFADPS--QPQPASSPSSRPPQQQPPFTQPHPPRTA---VFDPSEFPSLGA-VGAHAAMQPVSSSFLDNNPSID-HNLTNPSLSAPNLNGMPHYQDLYSLGAYADSRVKAVDALTGSSAPSEFTIQSEDFPALGGASASAALRQVNASAAIANGAYQIDTSALRASLQKAPLTESFYDRKVSSVSSLPQTVLGRVNVRQDASRIPQRGARLPNGYTATDAMSSMPSLQQMHYAPNSHVTSQQAFRDLTSTSPTPSALSAAANRPQLFQTRTRQPDLGRRFEEYELLDSRESASRLNMLSQSSKPILHQESRFSRSRMPNGQSPNTSEPHVLPSHSRGNGGNDPNTRGSGP-FRSDKFGMLSLLPLVSSGGNITRKDRVLPIGIDLTALGLNLNSHEPLYKTFHNPWEGGQGKSGDADTAGSSQKGQEPEYRLPTCYYMQPPALRTNHFTKFQLETLFYIFYIMPHDVLQLLAAVELYSRKWRYHKTLKLWFTCDVEARSGYE-GGYIYFDIKSWGKREFHEVNDNQSFIKGFMTEEELASVKIPPL 629
            MN  R  P   R +P Y+D+LF +MGKGFAD S    QP SS  S PP       Q    R+A   VFDPSEFPSLG  +G    M    ++ L ++  +D   LT+  +  P++NG+  + D+Y++  Y D R KAVDA+TG++  SEF++QSEDFPALGG      +R                                                             P   +  PNG T       +PS+ + H A                    P A+    N            D+     E   +D R     ++ LS +  P        +      G  P    P V  S S G G +      S     +D++GM  LL  V S    T  + +L +G+DLT LGL+L S  PLYK+F +PWEGGQ  +  +D  G  Q+ +EPE++LPTCYYMQPPAL+ +HF KFQL T+FY+FY MP D+LQ+LAA+ELY+RKW YHK LKLWFT + +    Y+   Y+YFDIKSWG+R FH+ N  QSFI+G MTE+E+ SV +P L
Sbjct:    1 MNGTRTAPLGPRRSPPYEDSLFQMMGKGFADKSARSAQPNSSTQSLPPSHAATLDQYSKIRSASSNVFDPSEFPSLGGGLGGPGPMSLNPAALLTSSTPLDVPALTSVGMPGPSVNGLGPFTDMYNIAGYGDVRAKAVDAVTGTAGSSEFSMQSEDFPALGGKPGPGGMRP------------------------------------------------------------PSMMSTAPNGPTL------LPSMARAHPA-------------------APDAIRQGHN------------DMA----ELTGVDIRTKG--IHGLSDAGIPNGDAVPVATLQTTNAGSKPEPEAPLV--SDSIGIGADGTKAAASPKVLAADQYGMKGLLKFVGSRAEGTDMN-MLSVGVDLTLLGLDLTSPGPLYKSFSSPWEGGQVGTRGSDKTGVPQRNEEPEFKLPTCYYMQPPALKNSHFAKFQLGTVFYVFYNMPRDILQVLAAIELYNRKWMYHKDLKLWFTNEPDVLESYDRAAYVYFDIKSWGERPFHDAN--QSFIQGLMTEDEVRSVPLPGL 465          
BLAST of Gchil8304.t1 vs. uniprot
Match: A0A7S2YKN9_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YKN9_9STRA)

HSP 1 Score: 167 bits (422), Expect = 1.160e-44
Identity = 89/189 (47.09%), Postives = 118/189 (62.43%), Query Frame = 0
Query:  441 FGMLSLLPLVSSGGNITRKDR-VLPIGIDLTALGLNLNSHEPLYKTFHNPWEGGQGKSGDADTAGSSQKGQEPEYRLPTCYYMQPPALRTNHFTKFQLETLFYIFYIMPHDVLQLLAAVELYSRKWRYHKTLKLWFT-------CDVEARSGYEGGYIYFDIKSWGKREFHEVNDNQSFIKGFMTEEEL 621
            +G+L LL ++     +T  DR  L +G DLT LGLNL S E +Y TF +PW           +  S+Q  ++P Y+LP+CYYMQPPAL+T H +KFQLETLFYIFY +P DVLQ  +A ELYSR+WRYH  LKLWF            + +   G Y+YFDI +W +R F+  N NQ+   GF+ EE++
Sbjct:    9 YGLLGLLGVI----RMTDADRNALALGTDLTMLGLNLGSAEHIYSTFSSPWS----------STDSTQPTKDPHYQLPSCYYMQPPALKTGHLSKFQLETLFYIFYALPKDVLQAYSAQELYSREWRYHGELKLWFKRAGPSDGLAASSAASAAGQYLYFDINTWERRLFNG-NMNQTMTNGFLPEEDI 182          
BLAST of Gchil8304.t1 vs. uniprot
Match: A0A7S0C8Q4_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C8Q4_9STRA)

HSP 1 Score: 171 bits (432), Expect = 1.850e-44
Identity = 101/203 (49.75%), Postives = 127/203 (62.56%), Query Frame = 0
Query:  430 TRGSGPFRSDKFGMLSLLPLVSSGGNITRKDR-VLPIGIDLTALGLNLNSHEPLYKTFHNPWEGGQGKSGDADTAGSSQKGQEPEYRLPTCYYMQPPALRTNHFTKFQLETLFYIFYIMPHDVLQLLAAVELYSRKWRYHKTLKLWFT----CDVEARSGYEGGYIYFDIKSWGKREFHEVNDNQSFIKGFMTEEELASVKIP 627
            T   G   S  +G+L LL ++     ++  DR  L +G DLT LGLNLNS E LY TF +PW        D+ T       +EP+Y+LP CYYMQPPAL+T H +KFQLETLFYIFY +P DVLQ  AA ELYSR WRYH  LKLWF      DV   +G +  YIYFDI SW +R F+  + +Q+F  GF++EE++  VK P
Sbjct:  137 TSTGGGVLSGDYGLLGLLGVI----RMSDADRNALALGSDLTLLGLNLNSSEHLYSTFASPWS-------DSPTT------REPQYQLPMCYYMQPPALKTGHLSKFQLETLFYIFYALPKDVLQAYAAQELYSRDWRYHVDLKLWFKRASPVDVPNANGTQ--YIYFDINSWERRIFNG-SMHQNFPNGFLSEEDVR-VKFP 318          
BLAST of Gchil8304.t1 vs. uniprot
Match: A0A7S2IE73_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2IE73_9EUKA)

HSP 1 Score: 166 bits (419), Expect = 3.520e-44
Identity = 91/169 (53.85%), Postives = 109/169 (64.50%), Query Frame = 0
Query:  439 DKFGMLSLLPLVSSGGNITRKD-RVLPIGIDLTALGLNLNSHEPLYKTFHNPWEGGQGKSGDADTAGSSQKGQEPEYRLPTCYYMQPPALRTNHFTKFQLETLFYIFYIMPHDVLQLLAAVELYSRKWRYHKTLKLWFTCDVEARSG----YEGGYIYFDIKSWGKREF 602
            D+FG++ LL ++     +T +D   L +G DLT LGLNLNS E LY TF +PW         AD+       ++PE+ LP CYYMQPPAL+T HF+KFQLETLFYIFY MP D LQ  AA ELY+R WRYHK LKLWFT    AR G     +G YIYFDI  W K+ F
Sbjct:   18 DRFGLMGLLSVI----RMTDQDLNTLALGTDLTTLGLNLNSSECLYATFASPW---------ADSPAQ----RDPEFSLPQCYYMQPPALKTGHFSKFQLETLFYIFYNMPRDTLQAYAATELYNRDWRYHKDLKLWFT--KAARQGAADTQKGQYIYFDINEWKKKIF 167          
BLAST of Gchil8304.t1 vs. uniprot
Match: A0A7S3EJ41_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EJ41_9RHOD)

HSP 1 Score: 169 bits (428), Expect = 5.680e-44
Identity = 91/187 (48.66%), Postives = 125/187 (66.84%), Query Frame = 0
Query:  439 DKFGMLSLLPLVSSGGNITRKDRVLPIGIDLTALGLNLNSHEP-LYKTFHNPWEGGQGKSGDADTAGSSQKGQEPEYRLPTCYYMQPPALRTNHFTKFQLETLFYIFYIMPHDVLQLLAAVELYSRKWRYHKTLKLWFTCDVEARSGYE-GGYIYFDIKSWGKREFHEVNDNQSFIKGFMTEEELAS 623
            D +GM   L +++          +L +GIDL  LGLNLNS EP L+++F +P+       GD     +SQKG +PEY++P+CY+ QP  ++ +HF+K QLETLFYIFY MP DVLQ  A++ELY R+WRYHK LKLWFT        YE G YIYFDI  W +R FH+ N  +SF++GF+T+EE+++
Sbjct:  140 DAYGMKGFLKVMAPSNPDVA---LLSLGIDLRTLGLNLNSPEPHLHESFKSPF-------GDRS---ASQKG-DPEYQIPSCYFTQPNQMQASHFSKLQLETLFYIFYSMPQDVLQTYASLELYEREWRYHKDLKLWFTRVPGTPMSYERGSYIYFDITDWERRPFHDAN--RSFVQGFLTQEEISN 310          
BLAST of Gchil8304.t1 vs. uniprot
Match: A0A8J5XV45_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XV45_DIALT)

HSP 1 Score: 172 bits (437), Expect = 1.920e-43
Identity = 95/176 (53.98%), Postives = 115/176 (65.34%), Query Frame = 0
Query:  432 GSGPFRS-DKFGMLSLLPLVSSGGNITRKD-RVLPIGIDLTALGLNLNSHEPLYKTFHNPWEGGQGKSGDADTAGSSQKGQEPEYRLPTCYYMQPPALRTNHFTKFQLETLFYIFYIMPHDVLQLLAAVELYSRKWRYHKTLKLWFTCDVEARSGYE---GGYIYFDIKSWGKREF 602
            GSG   S + +G+L LL ++     +T  D   L +G DLT LGLNLNS +PLY TF +PW  G  +S             EPEY LP CYYMQPPAL+T+HF KFQLETLFYIFY MP D LQ  AA ELY+R+WRYHK LKLWFT    A+ G +   GGY++FDI +WGK+ F
Sbjct:  308 GSGSGGSMEPYGLLGLLHVI----RVTDADLNYLALGTDLTTLGLNLNSPDPLYGTFASPWADGPVRS-------------EPEYSLPQCYYMQPPALKTSHFGKFQLETLFYIFYNMPRDTLQAYAATELYNREWRYHKDLKLWFT-RTGAQPGADDGKGGYVFFDINTWGKKTF 465          
BLAST of Gchil8304.t1 vs. uniprot
Match: A0A7S3A218_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A218_9RHOD)

HSP 1 Score: 169 bits (428), Expect = 5.330e-43
Identity = 91/187 (48.66%), Postives = 125/187 (66.84%), Query Frame = 0
Query:  439 DKFGMLSLLPLVSSGGNITRKDRVLPIGIDLTALGLNLNSHEP-LYKTFHNPWEGGQGKSGDADTAGSSQKGQEPEYRLPTCYYMQPPALRTNHFTKFQLETLFYIFYIMPHDVLQLLAAVELYSRKWRYHKTLKLWFTCDVEARSGYE-GGYIYFDIKSWGKREFHEVNDNQSFIKGFMTEEELAS 623
            D +GM   L +++          +L +GIDL  LGLNLNS EP L+++F +P+       GD     +SQKG +PEY++P+CY+ QP  ++ +HF+K QLETLFYIFY MP DVLQ  A++ELY R+WRYHK LKLWFT        YE G YIYFDI  W +R FH+ N  +SF++GF+T+EE+++
Sbjct:  233 DAYGMKGFLKVMAPSNPDVA---LLSLGIDLRTLGLNLNSPEPHLHESFKSPF-------GDRS---ASQKG-DPEYQIPSCYFTQPNQMQASHFSKLQLETLFYIFYSMPQDVLQTYASLELYEREWRYHKDLKLWFTRVPGTPMSYERGSYIYFDITDWERRPFHDAN--RSFVQGFLTQEEISN 403          
BLAST of Gchil8304.t1 vs. uniprot
Match: A0A7S2EBZ5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EBZ5_TRICV)

HSP 1 Score: 168 bits (426), Expect = 1.880e-42
Identity = 95/200 (47.50%), Postives = 118/200 (59.00%), Query Frame = 0
Query:  434 GPFRSDKFGMLSLLPLVSSGGNITRKDR-VLPIGIDLTALGLNLNSHEPLYKTFHNPWEGGQGKSGDADTAGSSQKGQEPEYRLPTCYYMQPPALRTNHFTKFQLETLFYIFYIMPHDVLQLLAAVELYSRKWRYHKTLKLWF-----TCDVEARSGYEGGYIYFDIKSWGKREFHEVNDNQSFIKGFMTEEELASVKIP 627
            G   S  FG+L LL ++     +T  DR  L +G DLTALG+NLNS + LY TF +PW               S   +EP+Y+LP CYYMQPPAL+T H +KFQLETLFYIFY +P DVLQ  AA ELYSR+WRYH  LKLWF     +  + A +     YIYFD+ +W +R F   N N   I G +  E+   VK P
Sbjct:  254 GAALSSDFGLLGLLSVI----RMTDADRNALALGSDLTALGMNLNSSDKLYSTFASPWS-------------ESPTTREPQYQLPMCYYMQPPALKTGHLSKFQLETLFYIFYALPRDVLQAYAAQELYSREWRYHVDLKLWFKRAGPSDGLTATANGGNQYIYFDVNTWERRLF---NGNVQTITGGLLSEDDVRVKFP 433          
BLAST of Gchil8304.t1 vs. uniprot
Match: A0A7R9W176_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W176_9STRA)

HSP 1 Score: 167 bits (422), Expect = 5.970e-42
Identity = 97/201 (48.26%), Postives = 124/201 (61.69%), Query Frame = 0
Query:  434 GPFRSDKFGMLSLLPLVSSGGNITRKDR-VLPIGIDLTALGLNLNSHEPLYKTFHNPWEGGQGKSGDADTAGSSQKGQEPEYRLPTCYYMQPPALRTNHFTKFQLETLFYIFYIMPHDVLQLLAAVELYSRKWRYHKTLKLWF----TCDVEARSGYEGG--YIYFDIKSWGKREFHEVNDNQSFIKGFMTEEELASVKIP 627
            G   S  +G+L LL ++     +T  DR  L +G DLTALG+NLNS + LY TF +PW               S   +EP+Y+LP CYYMQPPAL+T H +KFQLETLFYIFY +P DVLQ  AA ELYSR+WRYH  LKLWF      D  A +   GG  YIYFD+ +W +R F+   + QS   GF++E+++  VK P
Sbjct:  248 GAALSSDYGLLGLLSII----RMTDADRNALALGSDLTALGMNLNSSDKLYSTFASPWS-------------ESPTTREPQYQLPMCYYMQPPALKTGHLSKFQLETLFYIFYALPKDVLQAYAAQELYSREWRYHVDLKLWFKRGGASDGLAATA-NGGIQYIYFDVNTWERRLFN--GNVQSVTGGFLSEDDVR-VKFP 427          
The following BLAST results are available for this feature:
BLAST of Gchil8304.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ISS3_9FLOR5.070e-28065.38NOT2_3_5 domain-containing protein n=1 Tax=Gracila... [more]
R7QRK3_CHOCR7.030e-8436.65NOT2_3_5 domain-containing protein n=1 Tax=Chondru... [more]
A0A7S2YKN9_9STRA1.160e-4447.09Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7S0C8Q4_9STRA1.850e-4449.75Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S2IE73_9EUKA3.520e-4453.85Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A7S3EJ41_9RHOD5.680e-4448.66Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A8J5XV45_DIALT1.920e-4353.98Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
A0A7S3A218_9RHOD5.330e-4348.66Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S2EBZ5_TRICV1.880e-4247.50Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7R9W176_9STRA5.970e-4248.26Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007282NOT2/NOT3/NOT5, C-terminalPFAMPF04153NOT2_3_5coord: 508..601
e-value: 1.4E-24
score: 86.6
IPR038635CCR4-NOT complex subunit 2/3/5, N-terminal domain superfamilyGENE3D2.30.30.1020coord: 435..613
e-value: 8.2E-48
score: 164.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 379..437
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 487..509
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 52..70
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..133
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 103..123
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 379..433
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 320..357
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 320..360
NoneNo IPR availablePANTHERPTHR23326:SF3CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 2coord: 113..603
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..539
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 540..562
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 563..629
IPR040168Not2/Not3/Not5PANTHERPTHR23326CCR4 NOT-RELATEDcoord: 113..603

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004384_piloncontigtig00004384_pilon:1411948..1413837 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8304.t1Gchil8304.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004384_pilon 1411948..1413837 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8304.t1 ID=Gchil8304.t1|Name=Gchil8304.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=630bp
MSHLYYAYGAENAAGSPPSVHPPHPPHRRSPQAWSVDPRRAAAPLPLSQF
TDLSAAPAQPLSTAALMNSARPVPPSSRPTPYDDNLFHVMGKGFADPSQP
QPASSPSSRPPQQQPPFTQPHPPRTAVFDPSEFPSLGAVGAHAAMQPVSS
SFLDNNPSIDHNLTNPSLSAPNLNGMPHYQDLYSLGAYADSRVKAVDALT
GSSAPSEFTIQSEDFPALGGASASAALRQVNASAAIANGAYQIDTSALRA
SLQKAPLTESFYDRKVSSVSSLPQTVLGRVNVRQDASRIPQRGARLPNGY
TATDAMSSMPSLQQMHYAPNSHVTSQQAFRDLTSTSPTPSALSAAANRPQ
LFQTRTRQPDLGRRFEEYELLDSRESASRLNMLSQSSKPILHQESRFSRS
RMPNGQSPNTSEPHVLPSHSRGNGGNDPNTRGSGPFRSDKFGMLSLLPLV
SSGGNITRKDRVLPIGIDLTALGLNLNSHEPLYKTFHNPWEGGQGKSGDA
DTAGSSQKGQEPEYRLPTCYYMQPPALRTNHFTKFQLETLFYIFYIMPHD
VLQLLAAVELYSRKWRYHKTLKLWFTCDVEARSGYEGGYIYFDIKSWGKR
EFHEVNDNQSFIKGFMTEEELASVKIPPL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007282NOT2/3/5_C
IPR038635CCR4-NOT_su2/3/5_N_sf
IPR040168Not2/3/5