Gchil8167.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8167.t1
Unique NameGchil8167.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length418
Homology
BLAST of Gchil8167.t1 vs. uniprot
Match: A0A2V3ISQ9_9FLOR (Protein PIN-LIKES 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISQ9_9FLOR)

HSP 1 Score: 624 bits (1609), Expect = 2.000e-222
Identity = 323/416 (77.64%), Postives = 372/416 (89.42%), Query Frame = 0
Query:    1 MSTSSQILGASIGGSVELLTLSAAGAAMVHIDVFTQPVTSALSRAVYLLFIPSLVFGSILETTHSALMSVQQTGGNASSLQEIWVPVALALIVYLITAFIAFPITRLVARHKQEAVKRAIFACLILGNANTMPLLVMQSLCETFPPMQTAPQCYAKSMGYASLFLTVVNIVSWTALFQYLMYSPDSSVTVLDEEQALLQHSSPPPPQHIRPLDHEDVDVNRHDPVKEAITKALLSPPFIAVVSAMTCALITPIGNAFLHEDGAMRPFFLSINIVGGVVVPVSCMIVGAELYRSLSANSEEPQVMKRSKEEEFGTQTFIVILLVRMVVLPMVARGLYTALNLSEAVHNPLLGVFGLVEFNVPTANNTVIMVSIAAEALPRIGRQLRQDVAKAVFWQFLATPVFLTLNTAAALHLLYE 416
            MST++QILG+SIGGSVELLTLS+ GA +VHI VF Q VTSALSRAVYL+FIP+LVFGSILETTHSAL SV++T G+ S+LQEIWVPV LALI+Y+ITA IAFP+TRL+AR KQEAVKRAIFACLILGNANTMPLLVMQSLC+TF P+Q   QCY KSMGYASLFLTVVNIVSWTALFQYLMY+PDSS+   DEE ALLQ    P PQHIRPLDHEDVDV+R DPVKEAI +AL+SPPFIAVVS+MTCA+I  +G+AFLHE G +RPF LSINIVGG+VVPVSCMIVG+ELYRSL+++SE+ +++KR  +E+FGTQTF+VIL VRMV+LP+VAR +Y A N SE VHN LLG+FGLVEFNVPTANNTVIM+SIAAE+LPRIGRQLRQDV+KAVFWQFLATP+FLTLNTAAAL+L + 
Sbjct:    1 MSTAAQILGSSIGGSVELLTLSSVGALLVHIGVFQQAVTSALSRAVYLIFIPALVFGSILETTHSALKSVRETNGDPSALQEIWVPVVLALIIYVITAIIAFPVTRLIARSKQEAVKRAIFACLILGNANTMPLLVMQSLCDTFLPLQQGGQCYPKSMGYASLFLTVVNIVSWTALFQYLMYAPDSSLAASDEEHALLQPR--PAPQHIRPLDHEDVDVSRPDPVKEAIMRALVSPPFIAVVSSMTCAIIPGLGDAFLHEQGLLRPFLLSINIVGGIVVPVSCMIVGSELYRSLASSSEDEELVKRRPQEQFGTQTFVVILFVRMVLLPLVAREIYRAFNFSERVHNHLLGIFGLVEFNVPTANNTVIMISIAAESLPRIGRQLRQDVSKAVFWQFLATPIFLTLNTAAALNLQFS 414          
BLAST of Gchil8167.t1 vs. uniprot
Match: A0A2V3J3L9_9FLOR (Protein PIN-LIKES 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3L9_9FLOR)

HSP 1 Score: 431 bits (1107), Expect = 2.880e-146
Identity = 238/416 (57.21%), Postives = 307/416 (73.80%), Query Frame = 0
Query:    1 MSTSSQILGASIGGSVELLTLSAAGAAMVHIDVFTQPVTSALSRAVYLLFIPSLVFGSILETTHSALMSVQQTGGNASSLQEIWVPVALALIVYLITAFIAFPITRLVARHKQEAVKRAIFACLILGNANTMPLLVMQSLCETFPPMQTAPQCYAKSMGYASLFLTVVNIVSWTALFQYLMYSPDSSVTVLDEEQALLQHSSPPPPQHIRPLDHEDVDVNR-HDPVKEAITKALLSPPFIAVVSAMTCALITPIGNAFLHEDGAMRPFFLSINIVGGVVVPVSCMIVGAELYRSLSANSEEPQVMKRSKEEEFGTQTFIVILLVRMVVLPMVARGLYTALNLSEAVHNPLLGVFGLVEFNVPTANNTVIMVSIAAEALPRIGRQLRQDVAKAVFWQFLATPVFLTLNTAAALHLLY 415
            M++SS+IL +S+ GSVELLTL AAGA +VH  VF   VT+ LSRA+  LFIP+LVFGSIL T HSA+ ++  T  ++ +LQ+IWVPVALA +V+ + A  A+PIT+L+A  KQ+AV+RA+FACL+LGNAN MPLLVMQSLC+TFPP+   P CY KSMGYASLFLTV+NI+SWT L+Q+L  S DS     +EE  LL  +        R   +  +D++    P+ +AI + L S  F+AVV+A+  A++ P+GNAFL +DG +RPF LSINI+G VVVPV+ +IVGAELY SL    +E + +K  K+EEFG+ TF+VIL  R+V  P +AR LY  L L   + +PLLG+FGLVEFN PTAN TV+++S+ +  LPRIG QLR DVAK VFWQFLATP+FLTLNTAAALHL Y
Sbjct:    1 MASSSRILQSSLSGSVELLTLCAAGALLVHTQVFDADVTTQLSRAMKNLFIPALVFGSILHTAHSAIETLI-TSRDSIALQQIWVPVALAFLVFGMAAIFAYPITKLIASGKQQAVQRAVFACLVLGNANVMPLLVMQSLCDTFPPLMRTPHCYDKSMGYASLFLTVINIISWTVLYQFLRDSKDSD-HFREEEAPLLSQTG------FRSSINHPMDLDEPRAPIIDAIKRVLCSHIFLAVVAALAIAIVYPLGNAFLDDDGVLRPFLLSINILGNVVVPVNSLIVGAELYNSLYGCRDEDRYIKY-KDEEFGSSTFLVILFWRLVAFPWIARILYVLLGLDSKLGDPLLGIFGLVEFNNPTANTTVMLISVVSTRLPRIGDQLRYDVAKTVFWQFLATPIFLTLNTAAALHLQY 407          
BLAST of Gchil8167.t1 vs. uniprot
Match: A0A2V3IXQ6_9FLOR (Protein PIN-LIKES 5 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXQ6_9FLOR)

HSP 1 Score: 221 bits (562), Expect = 4.790e-65
Identity = 135/375 (36.00%), Postives = 216/375 (57.60%), Query Frame = 0
Query:   42 LSRAVYLLFIPSLVFGSILETTHSALMSVQQTGGNASSLQEIWVPVALALIVYLITAFIAFPITRLVARHKQEAVKRAIFACLILGNANTMPLLVMQSLCETFPPMQTAPQCYAKSMGYASLFLTVVNIVSWTALFQYLMYSPDSSVTVLDEEQALLQHSSPPPPQHIRPLDHEDVDVNRHDPVKEAITKALLSPPFIAVVSAMTCALITPIGNAFLHEDGAMRPFFLSINIVGGVVVPVSCMIVGAELYRSLSANSEEPQVMKRSKEEEFGTQTFIVILLVRMVVLPMVARGLYTALNLSEAVHNPLLGVFGLVEFNVPTANNTVIMVSIAAEALPRIGRQLRQDVAKAVFWQFLATPVFLTLNTAAALHLLYE 416
            +S  VY +F+P+L+F ++L+T       +  + G ASS QE W+P+  +++V +IT  + F ++R +AR+K E  KR IF C++LGN+N+MPLL+M+SLC++F P+Q    C+ K+  Y +L+ T    + ++ ++ Y++ + D       EEQ LL  +   PP+  + L  + + V         I ++LL+PP   V+   +   I    + FL ++  +R    +I +VG V VP+S +IVG +LY SL+++ +     K     EFG     +I L+R+V+ P V R LYT   L + +    LGVF L EF V TANN +I+  I     PR G  +++DVAK +F Q+L  PV +TLNTA AL + Y+
Sbjct:    1 MSNGVYKIFLPALIFIAMLDT-------LNDSEGKASS-QEWWIPLFFSVVVSIITMVVGFLLSRALARNKAEFTKRTIFMCIVLGNSNSMPLLIMKSLCDSFQPLQEKELCFMKATTYGTLYNTFFIFLGFSVIYPYVLDADDDQE---HEEQPLLGET---PPRQRKTLTCDFITV---------IKRSLLAPPTATVILTSSLRWIPGFADVFLKDNSPLRSVTEAIELVGSVAVPMSSVIVGGDLYESLTSHRKCSDHRK-----EFGNGIVAMICLIRLVLFPFVGRWLYTYFGLQDFIALKELGVFMLTEFGVVTANNAMIIAGIITAMYPRRGETMKRDVAKCLFLQYLVAPVLVTLNTALALQIQYD 347          
BLAST of Gchil8167.t1 vs. uniprot
Match: A0A1X6NVP0_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NVP0_PORUM)

HSP 1 Score: 83.6 bits (205), Expect = 3.940e-14
Identity = 88/380 (23.16%), Postives = 161/380 (42.37%), Query Frame = 0
Query:   42 LSRAVYLLFIPSLVFGSILETTHSALMSVQQTGGNASSLQEIWVPVALALIVYLITAFIAFPITRL-VARHKQEAVKRAIFACLILGNANTMPLLVMQSLCETFPPMQTAPQCYAKSMGYASLFLTVVNIVSWTALFQYLMYSPDSSVTVLDEEQALLQHSSPPPPQHIRPLDHEDVDVNRHDPVKEAITKALLSPPFIAVVSAMTCALITPIGNAFLHEDGAMRPFFLSINIVGGVVVPVSCMIVGAELYRSLSANSEEPQVMKRSKEEEFGTQTFIVILLVRMVVLPMVAR---GLYTALNLSEA--VHNPLLGVFGLVEFNVPTANNTVIMVSIAAEALPRIGRQLRQDVAKAVFWQFLATPVFLTLNTAAALHLLY 415
            +SR +  LF+P L+F SI+ET ++A  S   +          W     A+++ +  A +   ++R  ++       +RA     + GN+  +P+L+  S+C+ + P+     C A++ GY SL+L V +   WT   +YL  +                   PP  + +  L      +        +   +LL+PPF+A+V+A+  + I   G   +     +    L++ ++GG                                      ++ + +++ RM+++P+V      L  A+ L +   V   +L V  ++ F VPTANN +IM  +A            + VA  +FWQ+L  PVF++  TA AL  L+
Sbjct:    1 MSRMIVSLFLPCLLFISIVETLYAAAQSPVTSTTPVLLAMPAW-----AIVILIECAAVGTWVSRRWLSPTLSRPDRRACVVACVFGNSGQLPILLAGSVCDNYGPLVGDAGCKARATGYCSLYLLVWSSTLWTLGNRYLAGAAGDGXXXXXXXXXXXGPWGPPRGRWL--LGACLAALPALPAAVRSTLGSLLTPPFLAIVAALCFSTIPGAGALLVGRSSVLHSLALTMELLGG----------------------------------RLDARSVLAVVVARMLIMPVVGTLTLHLVLAVGLMDRSKVDPLMLTVMAMMAF-VPTANNALIMAQVAGAG--------DEAVALVIFWQYLVAPVFVSGWTALALATLW 330          
BLAST of Gchil8167.t1 vs. uniprot
Match: R7QA56_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QA56_CHOCR)

HSP 1 Score: 65.1 bits (157), Expect = 2.630e-9
Identity = 39/120 (32.50%), Postives = 65/120 (54.17%), Query Frame = 0
Query:  137 MQSLCETFPPMQTAPQCYAKSMGYASLFLTVVNIVSWTALFQYLMYSPDSSVTVLDEEQALLQHSSPPPPQHIRPLDHEDVDVNRHDPVKEAITKALLSPPFIAVVSA--MTCALITPIG 254
            MQSLC++F P+   P+C  +S G+ASL++TVV + +WT +F+YL  +PD++ +   E   ++  S+P   +    L              E I KA+ SPP ++V+    + C   T +G
Sbjct:    1 MQSLCDSFAPLNHDPKCVVRSTGFASLYITVVTLFTWTIIFEYLSAAPDATGSNDMESHPIVGTSTPRASRTGMSLG-------------ENIRKAMGSPPSLSVILGIGLACVCETNLG 107          
BLAST of Gchil8167.t1 vs. uniprot
Match: A0A5J4YLX2_PORPP (Protein PIN-LIKES 7 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YLX2_PORPP)

HSP 1 Score: 67.8 bits (164), Expect = 1.280e-8
Identity = 103/482 (21.37%), Postives = 181/482 (37.55%), Query Frame = 0
Query:   10 ASIGGSVELLTLSAAGAAMVHIDVFTQPVTSALSRAVYLLFIPSLVFGSILETTHSALMSVQQTGGNASSLQEIWVPVALALIVYLITAFIAFPITRLVARHKQEAVKRAIFACLILGNANTMPLLVMQSLCETFPPMQTAPQCYAKSMGYASLFLTVVNIVSWT-----------------------------------------------------ALFQYLMYSPDSSVTVLDEEQALLQHSSPPPPQHIRPLDHEDV------------DVNRHDPVKEAITKALLS----PPFIAVVSAMTCALITPIGNAFLHEDGAMRPFFLSINIVGGVVVPVSCMIVGAELYRSLSANSEEPQVMKRSKEEEFGTQTFIV--ILLVRMVVLPMVARGLYTALNL-----SEAVHNPLLGVFGLVEFNVPTANNTVIMVSIAAEALPRIGRQLRQDVAKAVF-WQFLATPVFLTLNTAAALHLL 414
            A++ G +E+  ++ AG  + ++ V     T  LS+ ++ L +P L+F S+LE+       V  + G   SL    +   + L   L+   +A    + VA    + + R      +  NAN +P+L + +LC  + P+Q    C  K+ G+ SL L V ++V W+                                                     A  Q   YS D+ +  L        H+  P  Q   P    D             D      V+  +   L S    PP  A++ A+  A +  +G   L+++  +R    +   +G   + +S ++VG  LY +                   G   F++  I LVR++++P      Y AL         A  + +  +  L+EF++P+ANN V M  +A  +         Q  A A+  +Q++  P  LT  T   L ++
Sbjct:   17 AALKGILEVFLMTFAGFYLAYLQVLDPGGTKLLSKLIFHLLLPCLLFASLLESL------VDLSFGELWSLP---LGAVINLTASLLIGVVALWAVQRVAGALTDRIWRTAVVACVFCNANQLPILFISALCSFYEPLQGEIGCLQKATGFTSLMLLVWSVVCWSVGMPFIANARADGDAGSHHVLPSPAGYASVPASVQSDSGSGDTAHSSHHEGAQAAVQSTAYSADADL--LGSLTRYKSHAGRPEQQVTTPKSESDSVVSPVGAQAMSDDAGALHLVRSTVWAVLNSVRGTPPTAAILLAIVLAQLPHLGPIILNQEAPLRLILEAQYALGYSTLTLSSLLVGGNLYFAYVRGFGNT-----------GASMFLLVSIALVRLILVPATLISGYVALQRVGWLPQNAQDDRIKQLAILLEFSMPSANNVVAMSELAGHS---------QAAASAILLFQYILAPFILTGTTVGILAII 467          
The following BLAST results are available for this feature:
BLAST of Gchil8167.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3ISQ9_9FLOR2.000e-22277.64Protein PIN-LIKES 3 n=1 Tax=Gracilariopsis chorda ... [more]
A0A2V3J3L9_9FLOR2.880e-14657.21Protein PIN-LIKES 3 n=1 Tax=Gracilariopsis chorda ... [more]
A0A2V3IXQ6_9FLOR4.790e-6536.00Protein PIN-LIKES 5 n=1 Tax=Gracilariopsis chorda ... [more]
A0A1X6NVP0_PORUM3.940e-1423.16Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
R7QA56_CHOCR2.630e-932.50Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A5J4YLX2_PORPP1.280e-821.37Protein PIN-LIKES 7 n=1 Tax=Porphyridium purpureum... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004776Membrane transport proteinPFAMPF03547Mem_transcoord: 19..189
e-value: 1.9E-11
score: 43.0
IPR045033Protein PIN-LIKES 1/3/4/5/7PANTHERPTHR31651FAMILY NOT NAMEDcoord: 15..408
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 41..60
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 141..159
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 183..237
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 312..332
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 83..107
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 416..417
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 292..311
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 119..140
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 259..269
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 61..82
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 30..40
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 270..291
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 392..415
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..29
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 238..258
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 333..391
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 108..118
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 160..182
NoneNo IPR availableTMHMMTMhelixcoord: 237..259
NoneNo IPR availableTMHMMTMhelixcoord: 314..336
NoneNo IPR availableTMHMMTMhelixcoord: 83..105
NoneNo IPR availableTMHMMTMhelixcoord: 266..288
NoneNo IPR availableTMHMMTMhelixcoord: 46..68
NoneNo IPR availableTMHMMTMhelixcoord: 392..414
NoneNo IPR availableTMHMMTMhelixcoord: 160..182

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004384_piloncontigtig00004384_pilon:397008..398588 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8167.t1Gchil8167.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004384_pilon 397008..398588 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8167.t1 ID=Gchil8167.t1|Name=Gchil8167.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=418bp
MSTSSQILGASIGGSVELLTLSAAGAAMVHIDVFTQPVTSALSRAVYLLF
IPSLVFGSILETTHSALMSVQQTGGNASSLQEIWVPVALALIVYLITAFI
AFPITRLVARHKQEAVKRAIFACLILGNANTMPLLVMQSLCETFPPMQTA
PQCYAKSMGYASLFLTVVNIVSWTALFQYLMYSPDSSVTVLDEEQALLQH
SSPPPPQHIRPLDHEDVDVNRHDPVKEAITKALLSPPFIAVVSAMTCALI
TPIGNAFLHEDGAMRPFFLSINIVGGVVVPVSCMIVGAELYRSLSANSEE
PQVMKRSKEEEFGTQTFIVILLVRMVVLPMVARGLYTALNLSEAVHNPLL
GVFGLVEFNVPTANNTVIMVSIAAEALPRIGRQLRQDVAKAVFWQFLATP
VFLTLNTAAALHLLYEA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004776Mem_trans
IPR045033PILS1/3/4/5/7