Gchil8254.t2 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8254.t2
Unique NameGchil8254.t2
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length625
Homology
BLAST of Gchil8254.t2 vs. uniprot
Match: UPI001E1E1407 (uncharacterized protein LOC123543642 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E1407)

HSP 1 Score: 587 bits (1514), Expect = 6.360e-196
Identity = 318/700 (45.43%), Postives = 413/700 (59.00%), Query Frame = 0
Query:    1 MLRAGVIEPVQWPWASPVVLAPKPDGSWRFCIDYRRLNDVTVKDVYLIRRMDEYIDSLGTATVFTALDANWVYWQVPVREEDQDKTAFVCHSGLYRFKWMPFGLTNAPATFQRAINILLARFKWRTCLVYLDDIIVFSDNLDDHLTQVRDIMTTLREAGITLKLRKCVFFTDTVKYLGHIIRPGRLMIEEARVRSLRKTKEPATQTELRSFLGLVNVYRRFIPNSADIAAPLNALLRKGQPPKLDPFTSAQTDVFNSLREAITSAPILSLPKPRLPFSVDTDSSDYQVGCALFQTTLEGESKPIGYWSRSLNVHERNYSVSEKECLAVVWALSTLRPYLMGVHFTVYTDHSSLRWLMTISEPSGRLMRWRLRLAEYDFEVIYKKGTQNAQADALSRLPTNGEALAVD----DEDIPCFVVD--------------DGTPGNPDWLHDKWNESPESDDDID-------ALLVSDDSKKPPPGDFVPIP-------------------------------------------------------PEEMVREQQGDPFCTKIRAWLNGVAQLPFEVNDLGYVVRT--VQSSPQVMVPHTLQSSVLHLSHYAKLGGHAGGRKLYLTLRRNFYWPAMAVDCYATVRFCTECAKNRVKLRKYSTKLKLFPARAPLEFVAIDTLGEFLTTRRGHKFLIVITDRFSKL 618
            ML+A VIEP    WASP+VL  KPDGS RFC+DYRRLN +TV+D Y + RMDE IDSLG A +FT LD N  YWQ+PVR ED++KT F  H GLY F  MPFGL NAPATFQR ++I L+   W+TCLVYLDDIIVFS    +H+  +  ++  L  AG+TL L+KC FF +TV YLGH+IRPG+L + +    +L+ TK P TQTELRSFLGL NVYRRF+   A IAAPLN LLRKG+ P+L P ++ Q   F +LR+A+ + PIL+LP+     ++DTD+SD+Q+GC L QT  +G  +PIGYWSR+L   E+NYS +EKECLA+VWA+  LRPYL    F + TDH SLRW++ +S+  GRL RWRLRL E+D+EV Y  G  +  AD +SRL +   A+A      D D+PCF ++              D    +P   H +    P    DID        L   +     PP   VP+P                                                        EE+  EQ  D  C ++     G + +  +VN  G ++R   +  S Q++VP +L+  +L L H+  + GH G  K+Y ++RR F+W AM  D   TVR CT CAKNRV  RK ++ LKLFPA  PLEFVA+D LG    T  G++FL+VITDRFSKL
Sbjct:    1 MLQAKVIEPTTSEWASPIVLVAKPDGSTRFCVDYRRLNAITVRDSYPLPRMDECIDSLGDAKIFTTLDCNSGYWQIPVRPEDREKTTFTSHEGLYWFLRMPFGLRNAPATFQRFVDITLSGLTWKTCLVYLDDIIVFSKTPTEHMAHLDAVLHRLYRAGLTLNLKKCHFFKETVDYLGHVIRPGQLSVAKKNTAALKVTKHPTTQTELRSFLGLCNVYRRFVKGFAKIAAPLNLLLRKGETPQLGPLSAEQVSAFETLRDALLNPPILALPRTEGALTLDTDASDHQLGCCLLQTQPDGSQRPIGYWSRALTSAEKNYSTTEKECLAIVWAILHLRPYLEQQKFIIRTDHHSLRWVLNLSDAQGRLARWRLRLLEFDYEVQYHPGAMHHGADMMSRLQSENPAIAAPTQPVDTDVPCFALENERNPSLILPHTLRDAQMSDPSCCHLETQYGPHPRVDIDPNGLIGLVLPSGEFHLAIPPLSGVPLPLSIVTEIPFPQPDDVTGDKDAPDLRWGEVLRSEKKCDSSNEMIAPLAEELPQAISHEEIRDEQSRDAECQELGE-RQGTSCIT-DVNTDGILIRNAPLDGSKQIVVPLSLRPRLLQLEHFPVIAGHPGVSKMYASMRRKFFWKAMYKDVEETVRHCTVCAKNRVNERKRTSFLKLFPADGPLEFVAMDILGPLPKTEHGNRFLLVITDRFSKL 698          
BLAST of Gchil8254.t2 vs. uniprot
Match: R7QG36_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QG36_CHOCR)

HSP 1 Score: 515 bits (1327), Expect = 4.710e-170
Identity = 268/522 (51.34%), Postives = 350/522 (67.05%), Query Frame = 0
Query:  100 MPFGLTNAPATFQRAINILLARFKWRTCLVYLDDIIVFSDNLDDHLTQVRDIMTTLREAGITLKLRKCVFFTDTVKYLGHIIRPGRLMIEEARVRSLRKTKEPATQTELRSFLGLVNVYRRFIPNSADIAAPLNALLRKGQPPKLDPFTSAQTDVFNSLREAITSAPILSLPKPRLPFSVDTDSSDYQVGCALFQTTLEGESKPIGYWSRSLNVHERNYSVSEKECLAVVWALSTLRPYLMGVHFTVYTDHSSLRWLMTISEPSGRLMRWRLRLAEYDFEVIYKKGTQNAQADALSRLPTNGEALAVDDEDIPCFVVD--DGTPGNPDWLHDKWNESPESDDDIDALLVSDDSKKPPPGD-FVPIPPEEMVREQQGDPFCTKIRAWLNGVAQLPFEVNDLGYVVRTVQSSPQVMVPHTLQSSVLHLSHYAKLGGHAGGRKLYLTLRRNFYWPAMAVDCYATVRFCTECAKNRVKLRKYSTKLKLFPARAPLEFVAIDTLGEFLTTRRGHKFLIVITDRFSKL 618
            MPFGLTNAPATFQRA++ILL+ F+W+ CL                                 LKLRKC FF + +KYLGH++RPG L ++ AR  +L + + P TQT+LRSFLGL NVYRRF+P+ A I  PLN LL+KGQP +L+ F       F+ L++AI +  +L+LPK  LP+ VDTD+SDYQ+G ALFQT  + + KPIG++SR+L   ERNYSVSEKE LAV+WA+ TLRPYL G HF V+TDH+SLRWLM +++PSGRL+RWRLRL+E+DFE+ YKKG  N+QADALSRL T GE +   D++IPCF+ +  +GT            E+ ES D ID +L  +    P   D F  + PEE++REQ  DPFC +I+           E  D G  V       Q+++P +L+  VL LSHYAKL GH GGRKLY TLRR FYW  MA+DCYA  + C  CA+ RVKLRK + ++KLF ++APLEF AID LGE +TT+RG+++++VI+DR+SKL
Sbjct:    1 MPFGLTNAPATFQRAMDILLSPFRWKCCL---------------------------------LKLRKCEFFVEKIKYLGHVVRPGTLEVDAARTVALEQVRYPQTQTQLRSFLGLCNVYRRFVPHYAKIVHPLNQLLKKGQPVQLEGFDEPCKKAFHKLKDAILAPLVLALPKKDLPYPVDTDASDYQIGAALFQTHPDAQRKPIGFFSRTLAAAERNYSVSEKEFLAVIWAVQTLRPYLYGEHFIVHTDHASLRWLMNVTDPSGRLIRWRLRLSEFDFEIKYKKGKGNSQADALSRLRTAGETVDEIDDEIPCFMAEPAEGTV-----------ENEESFDAIDDILALEGGTAPDRLDQFQAVTPEELIREQAVDPFCNRIK-----------EEIDAGKFV-------QLVIPQSLKDRVLGLSHYAKLAGHPGGRKLYKTLRRYFYWSTMALDCYAVAKNCAACARERVKLRKNTKEMKLFTSKAPLEFAAIDILGELITTKRGNRYILVISDRYSKL 460          
BLAST of Gchil8254.t2 vs. uniprot
Match: R7QL13_CHOCR (Integrase catalytic domain-containing protein n=2 Tax=Chondrus crispus TaxID=2769 RepID=R7QL13_CHOCR)

HSP 1 Score: 493 bits (1268), Expect = 5.970e-166
Identity = 258/522 (49.43%), Postives = 335/522 (64.18%), Query Frame = 0
Query:  100 MPFGLTNAPATFQRAINILLARFKWRTCLVYLDDIIVFSDNLDDHLTQVRDIMTTLREAGITLKLRKCVFFTDTVKYLGHIIRPGRLMIEEARVRSLRKTKEPATQTELRSFLGLVNVYRRFIPNSADIAAPLNALLRKGQPPKLDPFTSAQTDVFNSLREAITSAPILSLPKPRLPFSVDTDSSDYQVGCALFQTTLEGESKPIGYWSRSLNVHERNYSVSEKECLAVVWALSTLRPYLMGVHFTVYTDHSSLRWLMTISEPSGRLMRWRLRLAEYDFEVIYKKGTQNAQADALSRLPTNGEALAVDDEDIPCFVVD--DGTPGNPDWLHDKWNESPESDDDIDALLVSDDSKKPPPGDFVPIPPEEMVREQQGDPFCTKIRAWLNGVAQLPFEVNDL-GYVVRTVQSSPQVMVPHTLQSSVLHLSHYAKLGGHAGGRKLYLTLRRNFYWPAMAVDCYATVRFCTECAKNRVKLRKYSTKLKLFPARAPLEFVAIDTLGEFLTTRRGHKFLIVITDRFSKL 618
            MPFGLTNAPATFQRA++ILL+ F+W+ CL                                      C FF + +KYLGH++RPG L ++ AR  +L + + P TQT+LRSFLGL NVYRRF+P+ A IA PLN LL+KGQP +L+ F       F+ L++AI + P+L+LPK  LP+SVDTD+SDYQ+G ALFQT  + + KPIG++S++L   ERNYSVSEKECLAV+WA+ TLRPYL G HF V+TDH+SLRWLM +++PSGRL+RWRLRL E+DFE+ YKKG  N+QADALSRL T GE +   D +IPCF  +  +GT            E  ES D  D +L  +    P          + + + Q    F T              E  +L G + RT     QV++P +L+  VL LSHYAKL GH GGRKLY TLRR FYWP MA+DCYA  + C  CA+ RVK RK + ++KLF  +APLEFVAID LGE +TT+RG+++++VI+DR+SKL
Sbjct:    1 MPFGLTNAPATFQRAMDILLSPFRWKCCL--------------------------------------CEFFVEKIKYLGHVVRPGTLEVDVARTAALEQVQYPRTQTQLRSFLGLCNVYRRFVPHYAKIARPLNQLLKKGQPVQLEGFDEPCKKAFHKLKDAILAPPVLALPKKDLPYSVDTDASDYQIGAALFQTHPDAQRKPIGFFSKTLAAAERNYSVSEKECLAVIWAVQTLRPYLYGEHFVVHTDHASLRWLMNVTDPSGRLIRWRLRLPEFDFEIKYKKGKANSQADALSRLRTAGETVDEIDNEIPCFTAEPAEGTV-----------EDEESIDAADDILALEGGTAP----------DRLDQFQAVRTFST--------------ETEELEGTLCRTAVEFVQVVIPQSLRDRVLGLSHYAKLAGHPGGRKLYKTLRRYFYWPTMALDCYAVAKNCAACARERVKFRKNTKEMKLFTPKAPLEFVAIDILGELITTKRGNRYILVISDRYSKL 449          
BLAST of Gchil8254.t2 vs. uniprot
Match: R7QFB9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFB9_CHOCR)

HSP 1 Score: 494 bits (1273), Expect = 1.860e-162
Identity = 255/522 (48.85%), Postives = 339/522 (64.94%), Query Frame = 0
Query:  100 MPFGLTNAPATFQRAINILLARFKWRTCLVYLDDIIVFSDNLDDHLTQVRDIMTTLREAGITLKLRKCVFFTDTVKYLGHIIRPGRLMIEEARVRSLRKTKEPATQTELRSFLGLVNVYRRFIPNSADIAAPLNALLRKGQPPKLDPFTSAQTDVFNSLREAITSAPILSLPKPRLPFSVDTDSSDYQVGCALFQTTLEGESKPIGYWSRSLNVHERNYSVSEKECLAVVWALSTLRPYLMGVHFTVYTDHSSLRWLMTISEPSGRLMRWRLRLAEYDFEVIYKKGTQNAQADALSRLPTNGEALAVDDEDIPCFVVDDGTPGNPDWLHDKWNESPESDDDIDALLVSDDSKKPPPGDFVPIPPEEMVREQQGDPFCTKIRAWLNG--VAQLPFEVNDL-GYVVRTVQSSPQVMVPHTLQSSVLHLSHYAKLGGHAGGRKLYLTLRRNFYWPAMAVDCYATVRFCTECAKNRVKLRKYSTKLKLFPARAPLEFVAIDTLGEFLTTRRGHKFLIVITDRFSKL 618
            MP GLTNAPATFQRA++ILL+ F+W+ CLVY   II+FS + ++H+  V +I++ L +A + LKLRKC FF + +KYLG ++RPG L ++ AR  +L + + P TQT+LRSFLGL NVYRRF+P+ A I  PLN LL+KGQ  +L+         F+ L++AI   P+L+LPK  LP+SVDTD+SDYQ+G ALFQT  + + KPI ++SR+L   ERNYSVSEKECLAV+WA+ TL PYL G HF V+TD++SLR LM +++PSGRL+RWRLRL+E+DFE+ YKKG  N+QADALSRL T  E L                                                              +REQ  DPFC +I+  ++   V     E  +  G + RT     QV++P +L+  VL LSHYAKL G  GGRKLY TLRR FYWP MA+DCYA  + C  CA+ RVKLR+ + ++KLF  +APLEFVAID LGE +T +RG+++++VI+DR+SKL
Sbjct:    1 MPLGLTNAPATFQRAMDILLSPFRWKCCLVY---IIIFSKSWEEHVVHVDEILSVLEKACVKLKLRKCEFFVEKIKYLGRVVRPGTLEVDAARTAALEQVRYPQTQTQLRSFLGLCNVYRRFVPHYAKIEHPLNQLLKKGQLLQLEGLDEPCEKDFHKLKDAILEPPVLALPKKDLPYSVDTDASDYQIGAALFQTHPDAQRKPIRFFSRTLAAAERNYSVSEKECLAVIWAVQTLGPYLYGEHFVVHTDYASLRQLMNVTDPSGRLIRWRLRLSEFDFEIKYKKGKANSQADALSRLRTAEETL--------------------------------------------------------------IREQAVDPFCNRIKEEMDAGKVRTFSMETEEFEGTLCRTAAEFAQVVIPQSLRDRVLSLSHYAKLAGRPGGRKLYKTLRRYFYWPTMALDCYAVAKNCAACARERVKLRRNTKEMKLFTPKAPLEFVAIDILGEQITRKRGNRYILVISDRYSKL 457          
BLAST of Gchil8254.t2 vs. uniprot
Match: R7QKK5_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKK5_CHOCR)

HSP 1 Score: 489 bits (1259), Expect = 2.030e-161
Identity = 271/620 (43.71%), Postives = 352/620 (56.77%), Query Frame = 0
Query:    1 MLRAGVIEPVQWPWASPVVLAPKPDGSWRFCIDYRRLNDVTVKDVYLIRRMDEYIDSLGTATVFTALDANWVYWQVPVREEDQDKTAFVCHSGLYRFKWMPFGLTNAPATFQRAINILLARFKWRTCLVYLDDIIVFSDNLDDHLTQVRDIMTTLREAGITLKLRKCVFFTDTVKYLGHIIRPGRLMIEEARVRSLRKTKEPATQTELRSFLGLVNVYRRFIPNSADIAAPLNALLRKGQPPKLDPFTSAQTDVFNSLREAITSAPILSLPKPRLPFSVDTDSSDYQVGCALFQTTLEGESKPIGYWSRSLNVHERNYSVSEKECLAVVWALSTLRPYLMGVHFTVYTDHSSLRWLMTISEPSGRLMRWRLRLAEYDFEVIYKKGTQNAQADALSRLPTNGEALAVDDEDIPCFVV--DDGTPGNPDWLHDKWNESPESDDDIDALLVSDDSKKPPPGDFVPIPPEEMVREQQGDPFCTKIRAWLNGVAQLPFEVNDLGYVVRTVQSSPQVMVPHTLQSSVLHLSHYAKLGGHAGGRKLYLTLRRNFYWPAMAVDCYATVRFCTECAKNRVKLRKYSTKLKLFPARAPLEFVAIDTLGEFLTTRRGHKFLIVITDRFSKL 618
            MLRAGVIEP    WASPVV  PK DG+ RFC+DYR+LN VTV+                                  + EED+DKT F  HSGLYRF  MPFGL NAPATFQRA++I+L+R KW T LVYLDD+I                               C FF  +V YLGH+IRPGRL +E   V ++ + + P  QTELRSFLG+ NVYRRF+   A IAAPLN    K Q  + +  T A+   F  L+  + S PIL+LP+    +++DTD+  +QVGCAL Q   +G ++PIGYWSR+L   ERNY+ +EKECLAVVW++ TLRPYL G  F + TDH +LRW++ +++ SGRL RWRLRLAEYD+EV Y+ G ++  AD  SRL T+ E     D+++PCF V  D+G+    D +H  W+   +  D   AL ++               PEE  R+    P        L+G  Q                     +VP  L+  VL+L+H+ +L GH G  ++Y T+RR +YWP MA D ++TVR CT CA  R  L K    LKLFPA  PLEFVA+D LG    T  G++ ++VITDRFSKL
Sbjct:   56 MLRAGVIEPTSAKWASPVVFVPKKDGTMRFCVDYRKLNAVTVE----------------------------------IAEEDRDKTTFASHSGLYRFLRMPFGLKNAPATFQRAVDIILSRVKWETALVYLDDVI-------------------------------CAFFDTSVTYLGHVIRPGRLEVERRNVIAIERARAPTNQTELRSFLGMCNVYRRFVQGFAKIAAPLNKKTGKNQAYEFEILTDAEYAAFEELKRRLVSPPILALPRYGRKYTLDTDACGHQVGCALLQEQPDGGARPIGYWSRALTDAERNYTTTEKECLAVVWSILTLRPYLYGSAFNLRTDHEALRWVLNLADSSGRLARWRLRLAEYDYEVQYRPGVKHQLADGESRLRTDREDTEPVDDEVPCFAVQYDEGSEALLDNVH--WDPPQDRPDGCHALAIT---------------PEE--RDAATSP--------LDGTLQR--------------------VVPTRLRPRVLYLAHHPRLAGHPGATRMYYTIRREYYWPHMASDAFSTVRNCTSCAATRGTLVKNQKDLKLFPAAGPLEFVAMDLLGPLPKTAHGNQHVLVITDRFSKL 563          
BLAST of Gchil8254.t2 vs. uniprot
Match: R7Q5U0_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5U0_CHOCR)

HSP 1 Score: 468 bits (1204), Expect = 5.940e-156
Identity = 245/465 (52.69%), Postives = 306/465 (65.81%), Query Frame = 0
Query:  158 AGITLKLRKCVFFTDTVKYLGHIIRPGRLMIEEARVRSLRKTKEPATQTELRSFLGLVNVYRRFIPNSADIAAPLNALLRKGQPPKLDPFTSAQTDVFNSLREAITSAPILSLPKPRLPFSVDTDSSDYQVGCALFQTTLEGESKPIGYWSRSLNVHERNYSVSEKECLAVVWALSTLRPYLMGVHFTVYTDHSSLRWLMTISEPSGRLMRWRLRLAEYDFEVIYKKGTQNAQADALSRLPTNGEALAVDDEDIPCFVVDDGTPGNPDWLHDKWNESPESDDDIDALLV----SDDSKKPPPGDFVPIPPEEMVREQQGDPFCTKIRAWLNGVAQLPFEVNDLGYVVRTVQSSPQVMVPHTLQSSVLHLSHYAKLGGHAGGRKLYLTLRRNFYWPAMAVDCYATVRFCTECAKNRVKLRKYSTKLKLFPARAPLEFVAIDTLGEFLTTRRGHKFLIVITDRFSKL 618
            A   + L KC FFT  V YLGH+IRPG L I+E   R+LR+   P TQTELRSFLGL NVYRRF+PN A  AAPLN LL+KGQP KL+PF   +   F++LREA+ S PIL+LPK   P+S+DTD+SDYQVG ALFQ+  +G+ K IG+WSR L+  ERNYS SEKECLAVVW + TLRPYL G  FTV+T+HSSLRWLM I++PSGRLMRWRLRL E+DF+V YKKG  N QADALSRL T+GE     DE+IPCF+         D   D + +   +    DA+L     S D          PI  EEM+R                            G +VR V ++PQV+ P   Q+ +L++ H+A L GH  GRK++ TL R+ YWP++AVDCY T R C  CAK RVKLR+ + +LKLFPA APL+ ++ID LGE + T RG ++L+VITDRFS+L
Sbjct:   43 ASPVVLLEKCSFFTQEVHYLGHVIRPGTLSIDEVSTRALREIAIPTTQTELRSFLGLCNVYRRFVPNYAHKAAPLNQLLKKGQPAKLEPFDETEIKAFDTLREAVISPPILALPKAGFPYSMDTDASDYQVGTALFQSHEDGQRKHIGFWSRLLHAAERNYSTSEKECLAVVWGVVTLRPYLQGTRFTVHTEHSSLRWLMEITDPSGRLMRWRLRLGEFDFDVKYKKGKLNTQADALSRLFTSGETTVPVDEEIPCFLGRFSEMEPVDKFSDDFEDLESA--RFDAILTRERYSTDENL-----LDPITREEMLRG---------------------------GVLVRNVNATPQVVAPQDFQARILYMGHHALLAGHPRGRKMFYTLTRDCYWPSLAVDCYVTARNCIHCAKERVKLRRKTKRLKLFPATAPLKLLSIDLLGELIRTPRGIRWLLVITDRFSRL 473          
BLAST of Gchil8254.t2 vs. uniprot
Match: R7QLF2_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLF2_CHOCR)

HSP 1 Score: 477 bits (1227), Expect = 4.570e-155
Identity = 260/594 (43.77%), Postives = 353/594 (59.43%), Query Frame = 0
Query:   29 RFCIDYRRLNDVTVKDVYLIRRMDEYIDSLGTATVFTALDANWVYWQVPVREEDQDKTAFVCHSGLYRFKWMPFGLTNAPATFQRAINILLARFKWRTCLVYLDDIIVFSDNLDDHLTQVRDIMTTLREAGITLKLRKCVFFTDTVKYLGHIIRPGRLMIEEARVRSLRKTKEPATQTELRSFLGLVNVYRRFIPNSADIAAPLNALLRKGQPPKLDPFTSAQTDVFNSLREAITSAPILSLPKPRLPFSVDTDSSDYQVGCALFQTTLEGESKPIGYWSRSLNVHERNYSVSEKECLAVVWALSTLRPYLMGVHFTVYTDHSSLRWLMTISEPSGRLMRWRLRLAEYDFEVIYKKGTQNAQADALSRLPTNGEALAVDDEDIPCFVVD--DGTPGNPDWLHDKWNESPESDDDIDALLVSDDSKKPPPGDFVPIPPEEMVREQQGDPFCTKIRAWLNGVAQLPFEVNDLGYVVRT--VQSSPQVMVPHTLQSSVLHLSHYAKLGGHAGGRKLYLTLRRNFYWPAMAVDCYATVRFCTECAKNRVKLRKYSTKLKLFPARAPLEFVAIDTLGEFLTTRRGHKFLIVITDRFSKL 618
            +FC+DYR+LN VTV+D Y + RM E IDSLG AT                   D+DKT F  HSGLYRF  MPF L NAPATFQRA++I+L+R KW T LVYLDD                                 C FF  +V YLGH+IRPG+L +E   V ++ + + P  QTELRSFLG+ NVYR F+   A +AAPLN    K QP   +  T A+   F  L+  + S PIL+LP+    +++DTD+  +QVGCAL Q   +G ++PIGYWSR+L   ERNY+  EKECLAVVW++ TLRPYL G  F + TDH ++RW++ +++ SGRL RWRLRLAEY++EV Y+ G ++  AD +SRL T+G      D+++ CFVV   +G+      +H  W+ + +  D    L V+ + +     D   I     +REQ  D FC +  A   G     F+V+  G++VR   +  + Q +VP+ L+  VL+L+H+ +L GH GG ++Y TLRR +YWP +A D +ATVR CT  A  R  L K    L+LFPA  P+EFVA+D LG    T  G++ ++VITDRFSKL
Sbjct:    2 QFCVDYRKLNAVTVRDSYPLPRMGECIDSLGDAT-------------------DRDKTTFASHSGLYRFLRMPFALKNAPATFQRAVDIILSRVKWETALVYLDD---------------------------------CGFFDTSVTYLGHVIRPGQLEVERRNVIAIERARAPTNQTELRSFLGMCNVYRWFVQGFAKVAAPLNKNTGKNQPYDFEVLTDAEYAAFEELKRRLVSPPILALPRYGRKYTLDTDACGHQVGCALLQEQPDGGTRPIGYWSRALTNAERNYTTIEKECLAVVWSILTLRPYLYGSAFNLRTDHEAVRWVLNLADSSGRLARWRLRLAEYNYEVQYRPGVKHQLADGVSRLRTDGGDTTPVDDEVSCFVVQSQEGSASLLGKVH--WDLTQDRPDGFYVLAVTPEER-----DVSSISVANFLREQADDAFC-RAAADTVGEPNSKFDVDRYGFLVRKSPLDGTLQRVVPNRLRPRVLYLAHHPRLAGHPGGTRMYYTLRREYYWPHLASDAFATVRNCTSWAATRGTLFKNQKDLRLFPAAGPMEFVAMDLLGPLPKTAHGNQHVLVITDRFSKL 535          
BLAST of Gchil8254.t2 vs. uniprot
Match: R7Q4V7_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4V7_CHOCR)

HSP 1 Score: 447 bits (1150), Expect = 1.340e-146
Identity = 240/523 (45.89%), Postives = 317/523 (60.61%), Query Frame = 0
Query:  100 MPFGLTNAPATFQRAINILLARFKWRTCLVYLDDIIVFSDNLDDHLTQVRDIMTTLREAGITLKLRKCVFFTDTVKYLGHIIRPGRLMIEEARVRSLRKTKEPATQTELRSFLGLVNVYRRFIPNSADIAAPLNALLRKGQPPKLDPFTSAQTDVFNSLREAITSAPILSLPKPRLPFSVDTDSSDYQVGCALFQTTLEGESKPIGYWSRSLNVHERNYSVSEKECLAVVWALSTLRPYLMGVHFTVYTDHSSLRWLMTISEPSGRLMRWRLRLAEYDFEVIYKKGTQNAQADALSRLPTNGEALAVDDEDIPCFVVDDGTPGNPDWLHDKWNESPESDDDIDALLVSDDSKKPPPGD-FVPIPPEEMVREQQGDPFCTKIRAWLNG--VAQLPFEVNDL-GYVVRTVQSSPQVMVPHTLQSSVLHLSHYAKLGGHAGGRKLYLTLRRNFYWPAMAVDCYATVRFCTECAKNRVKLRKYSTKLKLFPARAPLEFVAIDTLGEFLTTRRGHKFLIVITDRFSKL 618
            MPFGLTN PA FQRA++ILL+ F+W+ CL                            +AG+ LKLRKC FF + +KYLGH++RPG L ++ AR+ +L + + P TQT+LRSFLGL NVYR+F+P+ A IA PLN LL+KGQP +++ F       F+ L+ AI + P+L+LPK  LP+S                                     RNYSVSEKECLAV+WA+ TLRPYL G HF V+TDH+SLRWLM +++PSGRL+RWRLRL+E+DF++ YKKG  N+QADALSRL T GE                    N D             D +D +L  +    P   D F  + PEE++REQ  DPFC  I+  ++   V     E  +L G + RT     QV++P +++  VL LSHYAKL GH GGRKLY TLRR FYWP MA+DCYA  + C  CA+ RVKLR+ + ++KLF  +APLEFVAID LGE + T+RG+++++VI+DR+SKL
Sbjct:    1 MPFGLTNTPAMFQRAMDILLSPFRWKCCL----------------------------KAGVKLKLRKCEFFVEKIKYLGHVVRPGTLEVDAARIAALEQVRYPQTQTQLRSFLGLCNVYRQFVPHYAKIAHPLNQLLKKGQPVRMEGFDEPCEKSFHKLKGAILAPPVLALPKKDLPYS-------------------------------------RNYSVSEKECLAVIWAVQTLRPYLYGEHFIVHTDHASLRWLMNVTDPSGRLIRWRLRLSEFDFKIKYKKGKANSQADALSRLRTAGET-------------------NEDRF-----------DALDDILALEGGTAPDRFDQFQAVTPEELIREQAVDPFCNCIKEEMDAGKVRTFSMETEELEGTLCRTAAEFVQVVIPQSVRDRVLGLSHYAKLAGHPGGRKLYKTLRRYFYWPTMALDCYAVAKNCAACARERVKLRRNTKEMKLFTPKAPLEFVAIDILGELIITKRGNRYILVISDRYSKL 428          
BLAST of Gchil8254.t2 vs. uniprot
Match: A0A4Y2L448_ARAVE (RNA-directed DNA polymerase n=2 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2L448_ARAVE)

HSP 1 Score: 437 bits (1123), Expect = 8.670e-139
Identity = 244/619 (39.42%), Postives = 343/619 (55.41%), Query Frame = 0
Query:    1 MLRAGVIEPVQWPWASPVVLAPKPDGSWRFCIDYRRLNDVTVKDVYLIRRMDEYIDSLGTATVFTALDANWVYWQVPVREEDQDKTAFVCHSGLYRFKWMPFGLTNAPATFQRAINILLARFKWRTCLVYLDDIIVFSDNLDDHLTQVRDIMTTLREAGITLKLRKCVFFTDTVKYLGHIIRPGRLMIEEARVRSLRKTKEPATQTELRSFLGLVNVYRRFIPNSADIAAPLNALLRKGQPPKLDPFTSAQTDVFNSLREAITSAPILSLPKPRLPFSVDTDSSDYQVGCALFQTTLEGESKPIGYWSRSLNVHERNYSVSEKECLAVVWALSTLRPYLMGVHFTVYTDHSSLRWLMTISEPSGRLMRWRLRLAEYDFEVIYKKGTQNAQADALSRLPTNGEALAVDDEDIPCFVVDDGTPGNPDWLHDKWNESPESDDDIDALLVSDDSKKPPPGDFVPIPPEEMVREQQGDPFCTKIRAWLNGVAQLPFEVNDLGYVVRTVQSSPQ-----VMVPHTLQSSVLHLSHYAKLGGHAGGRKLYLTLRRNFYWPAMAVDCYATVRFCTECAKNR-VKLRKYSTKLKLFPARAPLEFVAIDTLGEFLTTRRGHKFLIVITD 613
            ML  G+I+P + PW+SPVVL  K DGSWRFC+DYR+LN +T KDVY + R+D+ +DSL  A  F+++D    YWQ+ V E D++KTAFV   GLY FK MPFGL NAPATF+R ++ LL   KW  CL YLDDIIVFS+   DH++++R ++  ++EAG+ L  +KC+F    VK LGH++    +  +  +VR++R    P    ++RSFLGL + +RRFI     +A PL  LL++        F + + + F++L+ A+TS P+L L     P  + TD+S Y +G  L Q   E E K I Y SR+L   E+NYS +E+ECLAVVWA++  RPYL G HFTV TDH SL WLM++ +PSGRL RW LRL E+DF V+YK G ++  AD LSR P         DEDI       GTP                 D++ A++ +                  +  EQ+ DP  TKI            E   +  ++      P       ++P  L+  VL   H A   GH G  K Y  + + FYWP M  +    V  C +C + + +  +     + + PA  P   + +D LG F  + RG+K++IV TD
Sbjct:  311 MLDKGIIQPSESPWSSPVVLVRKKDGSWRFCVDYRKLNTITTKDVYPLPRIDDTLDSLKGAQFFSSMDLRSGYWQIEVDEADREKTAFVTPEGLYEFKVMPFGLCNAPATFERMMDNLLRHLKWTMCLCYLDDIIVFSETFKDHISRLRTVLKCIQEAGLVLNPKKCLFAAREVKILGHLVSRNGVRPDPDKVRAVRNFPTPKNVRDIRSFLGLCSYFRRFIKGFCYLAEPLQLLLKRDAKFH---FGAEEAEAFDNLKAALTSDPVLGLYDENSPTEIHTDASGYGIGAVLVQIQKEVE-KVIAYASRTLTKAEKNYSTTERECLAVVWAINKFRPYLFGRHFTVVTDHHSLCWLMSLKDPSGRLARWALRLQEHDFSVMYKTGKKHKDADTLSRNPV--------DEDI-------GTP-----------------DEVLAVITN----------------MNLAIEQKKDPNLTKINLAKTCPPTDEDEFKLIDGILYRKNFDPTGKKWLPVIPKHLRKDVLKHFHDAPTAGHLGFAKTYDRISKRFYWPVMYRNIVRYVMHCHDCQRRKSIPQQPPGRLVSIPPAMVPFHRIGVDLLGRFPKSARGNKWIIVCTD 877          
BLAST of Gchil8254.t2 vs. uniprot
Match: R7QTY1_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QTY1_CHOCR)

HSP 1 Score: 414 bits (1063), Expect = 8.360e-136
Identity = 214/437 (48.97%), Postives = 278/437 (63.62%), Query Frame = 0
Query:  160 ITLKLRKCVFFTDTVKYLGHIIRPGRLMIEEARVRSLRKTKEPATQTELRSFLGLVNVYRRFIPNSADIAAPLNALLRKGQPPKLDPFTSAQTDVFNSLREAITSAPILSLPKPRLPFSVDTDSSDYQVGCALFQTTLEGESKPIGYWSRSLNVHERNYSVSEKECLAVVWALSTLRPYLMGVHFTVYTDHSSLRWLMTISEPSGRLMRWRLRLAEYDFEVIYKKGTQNAQADALSRLPTNGEALAVDDEDIPCFVVDDGTPGNPDWLHDKWNESPESDDDIDALLVSDDSKKPPPGDFVPIPPEEMVREQQGDPFCTKIRAWLNG--VAQLPFEVNDL-GYVVRTVQSSPQVMVPHTLQSSVLHLSHYAKLGGHAGGRKLYLTLRRNFYWPAMAVDCYATVRFCTECAKNRVKLRKYSTKLKLFPARAPLEFVAID 593
            + LKLRKC FF + +KYLGH++RPG L ++ AR  +L + + P TQT+LRSFLGL NVY RF+ + A +A PLN LL+KGQP +L+ F       F+ L++AI + P+L+LPK  LP+SVD D+SDYQ+G AL QT  + + K IG++SR+L   ERNYSVSEKECLAV+WA+ TLRPYL G HF V+TDH+SLRWLM +++PSGRL+RWRLRL+E+DFE+ YKKG  N+QADALSRL T GE                                                              E++ EQ  DPFC +I+  ++   V +   E  +L G + RT     QV++P +L+  VL L HYAKL GH GGRKLY TLRR FYWPAMA+DCYA  + C  CA+ RVKLR+ + ++KLF  +APLEFVAID
Sbjct:   65 LLLKLRKCEFFVEKIKYLGHVVRPGTLEVDAARTVALEQVRYPQTQTQLRSFLGLCNVYGRFVLHYAKVAQPLNQLLKKGQPVQLEGFDEPCKKAFHKLKDAILAPPVLALPKKDLPYSVDIDASDYQIGAALVQTHPDAQRKLIGFFSRTLASAERNYSVSEKECLAVIWAVQTLRPYLYGEHFIVHTDHASLRWLMNVTDPSGRLIRWRLRLSEFDFEIKYKKGKANSQADALSRLRTAGET-------------------------------------------------------------ELICEQAVDPFCNRIKEEMDTGKVRKFSMETEELEGTLCRTAADFVQVVIPQSLRDRVLGLRHYAKLAGHPGGRKLYKTLRRYFYWPAMALDCYAVAKNCAACARERVKLRRNTKEMKLFTPKAPLEFVAID 440          
The following BLAST results are available for this feature:
BLAST of Gchil8254.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001E1E14076.360e-19645.43uncharacterized protein LOC123543642 n=1 Tax=Merce... [more]
R7QG36_CHOCR4.710e-17051.34Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QL13_CHOCR5.970e-16649.43Integrase catalytic domain-containing protein n=2 ... [more]
R7QFB9_CHOCR1.860e-16248.85Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QKK5_CHOCR2.030e-16143.71Integrase catalytic domain-containing protein n=1 ... [more]
R7Q5U0_CHOCR5.940e-15652.69Integrase catalytic domain-containing protein n=1 ... [more]
R7QLF2_CHOCR4.570e-15543.77Integrase catalytic domain-containing protein n=1 ... [more]
R7Q4V7_CHOCR1.340e-14645.89Integrase catalytic domain-containing protein n=1 ... [more]
A0A4Y2L448_ARAVE8.670e-13939.42RNA-directed DNA polymerase n=2 Tax=Araneus ventri... [more]
R7QTY1_CHOCR8.360e-13648.97Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041373Reverse transcriptase, RNase H-like domainPFAMPF17917RT_RNaseHcoord: 273..376
e-value: 2.3E-34
score: 117.8
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 191..277
e-value: 8.9E-21
score: 75.7
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 46..181
e-value: 1.5E-71
score: 242.0
NoneNo IPR availableGENE3D3.10.20.370coord: 278..347
e-value: 1.4E-6
score: 30.1
NoneNo IPR availableGENE3D1.10.340.70coord: 487..567
e-value: 6.1E-12
score: 47.6
NoneNo IPR availableGENE3D3.10.10.10HIV Type 1 Reverse Transcriptase, subunit A, domain 1coord: 1..106
e-value: 1.5E-71
score: 242.0
NoneNo IPR availablePANTHERPTHR24559:SF324TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEINcoord: 1..382
NoneNo IPR availablePANTHERPTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINcoord: 1..382
NoneNo IPR availableCDDcd09274RNase_HI_RT_Ty3coord: 279..398
e-value: 7.91199E-60
score: 193.478
NoneNo IPR availableCDDcd01647RT_LTRcoord: 5..181
e-value: 8.99968E-83
score: 255.983
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 22..181
e-value: 5.6E-29
score: 101.2
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 2..181
score: 13.836375
IPR041588Integrase zinc-binding domainPFAMPF17921Integrase_H2C2coord: 511..569
e-value: 2.2E-12
score: 46.9
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 1..383

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004384_piloncontigtig00004384_pilon:903867..905818 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8254.t2Gchil8254.t2Gracilaria chilensis NLEC103_M9 malemRNAtig00004384_pilon 903867..905818 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8254.t2 ID=Gchil8254.t2|Name=Gchil8254.t2|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=625bp
MLRAGVIEPVQWPWASPVVLAPKPDGSWRFCIDYRRLNDVTVKDVYLIRR
MDEYIDSLGTATVFTALDANWVYWQVPVREEDQDKTAFVCHSGLYRFKWM
PFGLTNAPATFQRAINILLARFKWRTCLVYLDDIIVFSDNLDDHLTQVRD
IMTTLREAGITLKLRKCVFFTDTVKYLGHIIRPGRLMIEEARVRSLRKTK
EPATQTELRSFLGLVNVYRRFIPNSADIAAPLNALLRKGQPPKLDPFTSA
QTDVFNSLREAITSAPILSLPKPRLPFSVDTDSSDYQVGCALFQTTLEGE
SKPIGYWSRSLNVHERNYSVSEKECLAVVWALSTLRPYLMGVHFTVYTDH
SSLRWLMTISEPSGRLMRWRLRLAEYDFEVIYKKGTQNAQADALSRLPTN
GEALAVDDEDIPCFVVDDGTPGNPDWLHDKWNESPESDDDIDALLVSDDS
KKPPPGDFVPIPPEEMVREQQGDPFCTKIRAWLNGVAQLPFEVNDLGYVV
RTVQSSPQVMVPHTLQSSVLHLSHYAKLGGHAGGRKLYLTLRRNFYWPAM
AVDCYATVRFCTECAKNRVKLRKYSTKLKLFPARAPLEFVAIDTLGEFLT
TRRGHKFLIVITDRFSKLGIGGFW*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041373RT_RNaseH
IPR043128Rev_trsase/Diguanyl_cyclase
IPR000477RT_dom
IPR041588Integrase_H2C2
IPR043502DNA/RNA_pol_sf