Gchil8214.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil8214.t1
Unique Name	Gchil8214.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	340

Homology

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BLAST of Gchil8214.t1 vs. uniprot
Match: R7QT24_CHOCR (Glycosyl transferase-like protein similarity to family GT77 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QT24_CHOCR)

HSP 1 Score: 279 bits (713), Expect = 2.980e-86
Identity = 138/318 (43.40%), Postives = 200/318 (62.89%), Query Frame = 0

Query:   11 CTEGHTQYSCYSSLLSLAESRQEERNIILLVVTNTTRHLVLNWCISINRVHLQNYILVALDSASYIFFADLNAPVVTIPNAP--SPVSRSEVWIRRTLLTSVLLLNDFNVLISDADAIAVRSPFSSPIFKSYYPSFDIIASPSNFPNPLRNELPKDCIAVS--KTPWRHQPCMGWIFIRSNAKTNRFFSKLFIPNVLKYGDDQIGLVCALQYAGESWKDPHPWSWTDSTIIQFRNPALRMLMLPATRYVRNCTKFKQDKLRNYGIWKFDFNNVAMFHCKGPDKRANAENNDVWYLRERWSEEKTSPNLPFKAYLHKIT 324
            C  G    +CY  ++ LA  RQ+ R ++L+VVT+ T  +VLNWC S+ R+HL NYILVALD  ++ FF +  APVV +   P  S V +S+VWIRRTL T ++L +  +VL+ D DA+ ++SPF+S     +  + D+I+SPSNFPNP + ELP  C +    +  WRH PCMGW+ +RS+A+   FF    + +VL YGDDQIG  CA++ AG  W+D   W+   +  I  + P L ++MLP +++VRNCT+F  ++ R YG+  FD   V ++HCKG  K+ANA NND W++ E W +        F +YL  I+
Sbjct:  223 CIGGWGSKACYDGIIRLAFQRQQFRTVVLVVVTDGTYDVVLNWCASMLRIHLDNYILVALDEDAHGFFRERGAPVVPLLRGPCESEVEKSDVWIRRTLATYMILKHGMDVLVCDVDAVMMKSPFTSVHSHFHDGTLDMISSPSNFPNPTKGELPDACPSPGPGRMEWRHWPCMGWMLMRSSAQMREFFLDYVLRDVLLYGDDQIGFNCAVRRAGAEWEDGVDWNVRKAVRISSKRPWLELMMLPGSQFVRNCTEFAHERKRGYGMRGFDEAAVELYHCKGYHKKANAVNNDFWFIHEDWEDVSMERTQSFSSYLLSIS 540

The following BLAST results are available for this feature:

BLAST of Gchil8214.t1 vs. uniprot

BLAST of Gchil8214.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
R7QT24_CHOCR	2.980e-86	43.40	Glycosyl transferase-like protein similarity to fa...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005069	Nucleotide-diphospho-sugar transferase	PFAM	PF03407	Nucleotid_trans	coord: 61..263 e-value: 5.3E-9 score: 36.4

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004384_pilon	contig	tig00004384_pilon:701417..702436 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil8214.t1	Gchil8214.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004384_pilon 701417..702436 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil8214.t1 ID=Gchil8214.t1|Name=Gchil8214.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=340bp
MPSTKNQFNLCTEGHTQYSCYSSLLSLAESRQEERNIILLVVTNTTRHLV
LNWCISINRVHLQNYILVALDSASYIFFADLNAPVVTIPNAPSPVSRSEV
WIRRTLLTSVLLLNDFNVLISDADAIAVRSPFSSPIFKSYYPSFDIIASP
SNFPNPLRNELPKDCIAVSKTPWRHQPCMGWIFIRSNAKTNRFFSKLFIP
NVLKYGDDQIGLVCALQYAGESWKDPHPWSWTDSTIIQFRNPALRMLMLP
ATRYVRNCTKFKQDKLRNYGIWKFDFNNVAMFHCKGPDKRANAENNDVWY
LRERWSEEKTSPNLPFKAYLHKITRKRYIEVKDNNLPYS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005069	Nucl-diP-sugar_transferase