Gchil8298.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8298.t1
Unique NameGchil8298.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length257
Homology
BLAST of Gchil8298.t1 vs. uniprot
Match: A0A2V3ILR8_9FLOR (Mitochondrial inner membrane protease subunit n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILR8_9FLOR)

HSP 1 Score: 411 bits (1056), Expect = 1.300e-142
Identity = 198/256 (77.34%), Postives = 235/256 (91.80%), Query Frame = 0
Query:    1 MRQKGIYRSVEYVVEKLSLDGREVPSTAVVPPSRLHQVVASIRPLNPLLPRFERAWPVHVALGDAVLWTYKQDLIRSALATIAMSVSFVVGGLLAPSVLGIYSIPTVSMEPSLHVGDALLVEKLSLRDTPPRDGEIVLFTPPSRLQNILLSSAQRQSSSRLPRRNDLFVKRVVAVPGDVIEVRLTGVYVNGRKVDEIVPNSPVVEPRSIPEGFVFVVGDNPNQSLDSRYWGLLPIDCVVGRPVALIFPPQRLHMPV 256
            MRQ+G+YRSVEYV+EKL+LDG+EV +TA VPPSR+H+VVA++RPLN LLPRFERAWPV VA+GDAVLWTYK+DLIR AL T+AMSV+FV  GL+ P+VLGIYSIPTVSMEPSL+VGDALLVEK+SLR TPPR GEIVLFTPPSRL++IL SS Q  +S+R+P RNDLF+KRVVAVPGDVIEVRLTGV+VN  K+DE+VPNSP+V P +IP+G++FV+GDNP++SLDSRYWGLLPI+CVVGRPVA IFPPQRLH+PV
Sbjct:   60 MRQRGVYRSVEYVIEKLTLDGQEVFTTASVPPSRVHEVVATVRPLNRLLPRFERAWPVEVAVGDAVLWTYKRDLIRCALVTLAMSVTFVTIGLIGPTVLGIYSIPTVSMEPSLYVGDALLVEKISLRATPPRKGEIVLFTPPSRLKSILTSSNQHLASTRIPHRNDLFIKRVVAVPGDVIEVRLTGVFVNAVKIDEVVPNSPIVAPCTIPDGYIFVIGDNPSKSLDSRYWGLLPIECVVGRPVARIFPPQRLHVPV 315          
BLAST of Gchil8298.t1 vs. uniprot
Match: A0A7S0Y0G9_HEMAN (Mitochondrial inner membrane protease subunit n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0Y0G9_HEMAN)

HSP 1 Score: 130 bits (328), Expect = 1.250e-32
Identity = 97/259 (37.45%), Postives = 133/259 (51.35%), Query Frame = 0
Query:    5 GIYRSVEY-VVEKLSLDGREVPSTAVVPPSRLHQVVASIRPLNPLLPRFERAWPVHVALGDAVLW-TYKQDLIRSALATIAMSVSFVVGGLLAPSVLGIYSIPTVSMEPSLHVGDALLVEKLSLRDTPPRDGEIVLFTPPSRLQNILLSSAQRQSSSRLPRRNDLFVKRVVAVPGDVIEVRLT--GVYVNGRKVDEIVPNSP--------VVEPRS--IPEGFVFVVGDNPNQSLDSRYWGLLPIDCVVGRPVALIFPP 249
            G+Y  +EY ++    +D +E   T    P    +V  S+RP+ PL  R ER WPV V+  D   + T       + + T   SVS V+  L A   +  Y IP+ SMEP++H GD +L EKLS     P+ GEI+LFTPP  L+ ++ S    Q     PR  DLF+KRV A+PGDV+ V      V VNG +V    P           +V P+   +  G  FV+GD    S+DSR WG L  D V  RP+  ++PP
Sbjct:   77 GVYPGIEYRLMGMRDIDTKE---TLFRVPEGAGEVEMSVRPIYPLDKRLERPWPVVVSSSDVPCFLTQAMYNSLTLVGTALWSVSVVLFVLFAREAVSFYKIPSASMEPTIHRGDLILAEKLSPLWKTPQRGEILLFTPPDSLKAVVES----QGGFVGPR--DLFIKRVAALPGDVVTVDTADGSVTVNGERVQRQGPTCDEPSGGAQGLVRPQKGKVKSGVSFVLGDCGPVSVDSRVWGTLSDDDVKARPLVKLWPP 326          
BLAST of Gchil8298.t1 vs. uniprot
Match: A0A0G4EFP7_VITBC (Mitochondrial inner membrane protease subunit n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EFP7_VITBC)

HSP 1 Score: 129 bits (323), Expect = 2.650e-31
Identity = 90/289 (31.14%), Postives = 136/289 (47.06%), Query Frame = 0
Query:    1 MRQKGIYRSVEYVVEKLSLDGREVPSTAVVPPSRLHQVVASIRPLNPLLPRFERAWPVHVALGDAVLW-TYKQDLIRSALATIAMSVSFVVGGLLAPSVLGIYSIPTVSMEPSLHVGDALLVEKLSLRDTPPRDGEIVLFTPPSRLQNILLSSAQRQSSSRLPRRNDLFVKRVVAVPGDVIEVRLTGVYVNGRKVDEIVPNSP-------------------------------------VVEPRSIPEGFVFVVGDNPNQSLDSRYWGLLPIDCVVGRPVALIFPPQR 251
            M +KG+Y  V+Y VE++ +     P         +   V ++RP   L+ + ER WPV +A+ +  ++ T +     + ++T+  +   +   L+A     +Y IP+ SMEP+LH GD LLVEK+S    PP++G+IVLF PP +L+  +     RQ+  +L    DLFVKRV A  GD + V      +NG       P  P                                     V +   +  G V+V+GDNP +S+DSR WG L    +VG PV  +FP  R
Sbjct:  131 MFRKGVYPGVDYRVERIDVRANGDP---------IRDAVITVRPRYRLVDKLERQWPVTIAMSEVPIFLTPRMYNTATLISTLLSAAQLLAVALVASQFCSLYYIPSYSMEPTLHKGDVLLVEKVSRLVRPPKNGDIVLFNPPEQLRTFV-----RQAGGQLAP-GDLFVKRVAATQGDRVTVDNGLPTINGHTYVYPEPEEPPTIGSDAPPARADGSMQRLAIGRGFAWPYAGEAPSQWVADECVLGSGAVYVLGDNPVRSVDSRLWGELRESEIVGHPVIRLFPWGR 404          
BLAST of Gchil8298.t1 vs. uniprot
Match: A0A252E2V9_9NOSO (Signal peptidase I n=5 Tax=Nostocales TaxID=1161 RepID=A0A252E2V9_9NOSO)

HSP 1 Score: 121 bits (304), Expect = 1.460e-30
Identity = 73/193 (37.82%), Postives = 105/193 (54.40%), Query Frame = 0
Query:   63 GDAVLWTYKQDLIRSALATIAMSVSFVVGGLLAPSVLGIYSIPTVSMEPSLHVGDALLVEKLSLRDTPPRDGEIVLFTPPSRLQNILLSSAQRQSSSRLPRRNDLFVKRVVAVPGDVIEVRLTGVYVNGRKVDEIV----PNSPVVEPRSIPEGFVFVVGDNPNQSLDSRYWGLLPIDCVVGRPVALIFPPQR 251
              + +W   Q+     L  IA+ ++FV+   +A        IP+ SM P+LH GD L+VEK+S R  PP+ G+I++F PP+ LQ             R   ++  F+KRV+  PG+V+ V    VY+NG+ + E      PNSP   P ++PEG  FV+GDN N S DSRYWG LP   ++GR     +P  R
Sbjct:   13 ASSKIWRSSQE--NLILIAIALCLAFVIRTFIAEP----RYIPSDSMLPTLHTGDRLVVEKISYRFHPPKTGDIIVFQPPAELQR------------RGYPQDQAFIKRVIGEPGEVVSVARGKVYLNGQALQEEYIAEPPNSPY-PPHTVPEGEFFVMGDNRNDSNDSRYWGFLPKRNIIGRATFRFWPLNR 186          
BLAST of Gchil8298.t1 vs. uniprot
Match: A0A448ZBV4_9STRA (Mitochondrial inner membrane protease subunit n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZBV4_9STRA)

HSP 1 Score: 129 bits (324), Expect = 1.520e-30
Identity = 100/270 (37.04%), Postives = 147/270 (54.44%), Query Frame = 0
Query:    1 MRQKGIYRSVEY-VVEKLSLDGREVPSTAVVPPSRLHQVVASIRPLNPLLPRFERAWPVHVALGDAV-LWTYKQDLIRSALATIAMSVSFVVGGLLAPSVLGIYSIPTVSMEPSLHVGDALLVEKLSLRDTPPRD---GEIVLFTPPSRLQNILLSSAQRQSSSRLPRRNDLFVKRVVAVPGDVIEVRLTG-VYVNGRKV----DEIVPNSPV------VEPRS---IPEGFVFVVGDNPNQSLDSRYWGLLPIDCVVGRPVALIFPPQR 251
            M ++G Y  VEY ++  L  DGRE  ++    P   ++    ++P+ PL+ + ER WPV V   D   L+T     + SA  ++  + S +    L    + ++ IP+ SM+P+L VGD LLV+K+S R TP R    G++VLF+PPSRLQ I+  +    SS       DLFVKR+ A PGD + V   G V VNG+ V     ++    P+      +EPR    I +  VFV+GD  + S+DSR WG L  + +VGRP+  I+P  R
Sbjct:  361 MFEQGAYPGVEYRILRILDRDGRERFTSC---PGADYE----LKPVYPLVAQLERPWPVRVNERDIPKLFTPSMYNLLSAFGSLFTAASGLFVAFLLSQAISLFFIPSKSMDPTLKVGDVLLVDKVSSR-TPFRKNEVGDMVLFSPPSRLQEIVAKNGGNLSS------RDLFVKRIAASPGDRVTVYKDGKVDVNGQDVVAGRRDLCEAEPLRLIEKYIEPREDKIIDQKEVFVMGDCSSVSVDSRVWGSLEAENIVGRPIVRIWPLDR 616          
BLAST of Gchil8298.t1 vs. uniprot
Match: K9WUI5_9NOST (Signal peptidase I n=3 Tax=Cylindrospermum TaxID=56106 RepID=K9WUI5_9NOST)

HSP 1 Score: 119 bits (298), Expect = 1.140e-29
Identity = 73/198 (36.87%), Postives = 107/198 (54.04%), Query Frame = 0
Query:   61 ALGDAVLWTYKQDLIRSALATIAMSVSFVVGGLLAPSVLGIYSIPTVSMEPSLHVGDALLVEKLSLRDTPPRDGEIVLFTPPSRLQNILLSSAQRQSSSRLPRRNDLFVKRVVAVPGDVIEVRLTGVYVNGRKVDEIV----PNSPVVEPRSIPEGFVFVVGDNPNQSLDSRYWGLLPIDCVVGRPVALIFPPQRLHM 254
            A   + +W   Q+     L  IA+ ++F++  L+A        IP+ SM P+LH GD L+VEK+S R  PP  G+I++F PP+ LQ             R   ++  F+KR++  PG+VI V    VY+NG+ + E      PN P   P  +PEG  FV+GDN N S DSRYWG LP   ++GR +   +P  R+ +
Sbjct:   11 ATASSKIWRGWQE--NLTLIAIALCLAFLIRTLIAEP----RYIPSESMFPTLHTGDRLVVEKISYRLHPPTFGDIIVFQPPAELQR------------RGYPKDQAFIKRIIGQPGEVISVAQGKVYLNGQALSENYIAEPPNQPF-PPVKVPEGEFFVMGDNRNDSNDSRYWGFLPRKNIIGRAIFRFWPFDRIGL 189          
BLAST of Gchil8298.t1 vs. uniprot
Match: A0A8J5X9V5_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X9V5_DIALT)

HSP 1 Score: 121 bits (303), Expect = 1.560e-29
Identity = 67/154 (43.51%), Postives = 90/154 (58.44%), Query Frame = 0
Query:  104 IPTVSMEPSLHVGDALLVEKLSLRDTPPRDGEIVLFTPPSRLQNILLSSAQRQSSSRLPRRNDLFVKRVVAVPGDVIEVRLTGVYVNGRKVDE--IVPNSPVVEPR-SIPEGFVFVVGDNPNQSLDSRYWGLLPIDCVVGRPVALIFPPQRLHM 254
            IP++SM P+  VGD L VEK+S R  P    E+V+F PP     +          S  P+ ND  +KR+VA+ GD +EVR   +YVNG +VDE  I        PR ++PEG VFV+GDN N S DS YWG LP + ++G+ V   +PP RL +
Sbjct:  120 IPSLSMFPAFEVGDQLAVEKVSKRFAPMARDEVVVFKPPPAFFEL----------SGKPQDNDALIKRIVAIAGDTVEVRNGELYVNGEQVDEPFIAERPEYTMPRFTVPEGCVFVLGDNRNHSFDSHYWGPLPEENIIGKAVLKYWPPWRLAL 263          
BLAST of Gchil8298.t1 vs. uniprot
Match: K9QY14_NOSS7 (Signal peptidase I n=1 Tax=Nostoc sp. (strain ATCC 29411 / PCC 7524) TaxID=28072 RepID=K9QY14_NOSS7)

HSP 1 Score: 117 bits (293), Expect = 6.300e-29
Identity = 64/154 (41.56%), Postives = 89/154 (57.79%), Query Frame = 0
Query:  104 IPTVSMEPSLHVGDALLVEKLSLRDTPPRDGEIVLFTPPSRLQNILLSSAQRQSSSRLPRRNDLFVKRVVAVPGDVIEVRLTGVYVNGRKVDE---IVPNSPVVEPRSIPEGFVFVVGDNPNQSLDSRYWGLLPIDCVVGRPVALIFPPQRLHM 254
            IP+ SM P+L+ GD L+VEK+S    PP  G+IV+F PP+ LQ             R   ++  F+KRV+ VPG++I V    VY+NG+ + E     P S    P  +PE   FV+GDN N S DSRYWG LP + ++G  V   +PP+R+ M
Sbjct:   48 IPSESMVPTLYEGDRLVVEKVSYHFHPPTTGDIVVFQPPTELQK------------RGYPKDQAFIKRVIGVPGEIISVANGKVYLNGQPLTEDYIAEPPSQPFPPVKVPEDQFFVMGDNRNNSNDSRYWGFLPQENIIGHAVFRFWPPERMGM 189          
BLAST of Gchil8298.t1 vs. uniprot
Match: A0A6G9SM77_9CYAN (Signal peptidase I n=9 Tax=Nostocales TaxID=1161 RepID=A0A6G9SM77_9CYAN)

HSP 1 Score: 117 bits (292), Expect = 8.860e-29
Identity = 69/193 (35.75%), Postives = 104/193 (53.89%), Query Frame = 0
Query:   63 GDAVLWTYKQDLIRSALATIAMSVSFVVGGLLAPSVLGIYSIPTVSMEPSLHVGDALLVEKLSLRDTPPRDGEIVLFTPPSRLQNILLSSAQRQSSSRLPRRNDLFVKRVVAVPGDVIEVRLTGVYVNGRKVDEIV----PNSPVVEPRSIPEGFVFVVGDNPNQSLDSRYWGLLPIDCVVGRPVALIFPPQR 251
              + +W   Q+     L  IA+ ++F++   +A        IP+ SM P+LH GD L+VEK+S +  PP+ G+I++F PP  LQ             R   ++  F+KRV+  PG+++ V    VY+NG+ + E      PN+P   P+ +PEG  FV+GDN N S DSRYWG LP   ++GR     +P  R
Sbjct:   13 ASSKIWRSWQE--NLTLVAIALCLAFLIRTFIAEP----RFIPSDSMLPTLHTGDRLVVEKISYKFHPPKTGDIIVFQPPEELQR------------RGYPKDQAFIKRVIGEPGEIVSVAKGKVYLNGQALQEDYIAEPPNNPY-PPQVVPEGEFFVMGDNRNDSNDSRYWGFLPRKNIIGRATFRFWPLDR 186          
BLAST of Gchil8298.t1 vs. uniprot
Match: A0A2I8AA67_9NOSO (Signal peptidase I n=3 Tax=Nostocaceae TaxID=1162 RepID=A0A2I8AA67_9NOSO)

HSP 1 Score: 117 bits (292), Expect = 8.860e-29
Identity = 65/152 (42.76%), Postives = 90/152 (59.21%), Query Frame = 0
Query:  104 IPTVSMEPSLHVGDALLVEKLSLRDTPPRDGEIVLFTPPSRLQNILLSSAQRQSSSRLPRRNDLFVKRVVAVPGDVIEVRLTGVYVNGRKVDEIV----PNSPVVEPRSIPEGFVFVVGDNPNQSLDSRYWGLLPIDCVVGRPVALIFPPQR 251
            IP+ SM P+L+ GD L+VEK+S R  PP  G+IV+F PP+ LQ             R   ++  F+KRV+ +PG+VI V    VY+NG+ + E      PN P   P  +P+   FV+GDN N S DSRYWG LP + ++GR V   +PP+R
Sbjct:   48 IPSESMFPTLYEGDRLVVEKVSYRFHPPTSGDIVVFQPPAELQK------------RGYPKDQAFIKRVIGLPGEVISVANGKVYLNGQPLAEDYIAEPPNQPF-PPVKVPQDQFFVMGDNRNNSNDSRYWGFLPQENIIGRAVFRFWPPER 186          
The following BLAST results are available for this feature:
BLAST of Gchil8298.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ILR8_9FLOR1.300e-14277.34Mitochondrial inner membrane protease subunit n=1 ... [more]
A0A7S0Y0G9_HEMAN1.250e-3237.45Mitochondrial inner membrane protease subunit n=2 ... [more]
A0A0G4EFP7_VITBC2.650e-3131.14Mitochondrial inner membrane protease subunit n=1 ... [more]
A0A252E2V9_9NOSO1.460e-3037.82Signal peptidase I n=5 Tax=Nostocales TaxID=1161 R... [more]
A0A448ZBV4_9STRA1.520e-3037.04Mitochondrial inner membrane protease subunit n=1 ... [more]
K9WUI5_9NOST1.140e-2936.87Signal peptidase I n=3 Tax=Cylindrospermum TaxID=5... [more]
A0A8J5X9V5_DIALT1.560e-2943.51Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
K9QY14_NOSS76.300e-2941.56Signal peptidase I n=1 Tax=Nostoc sp. (strain ATCC... [more]
A0A6G9SM77_9CYAN8.860e-2935.75Signal peptidase I n=9 Tax=Nostocales TaxID=1161 R... [more]
A0A2I8AA67_9NOSO8.860e-2942.76Signal peptidase I n=3 Tax=Nostocaceae TaxID=1162 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000223Peptidase S26A, signal peptidase IPRINTSPR00727LEADERPTASEcoord: 97..113
score: 35.71
coord: 209..228
score: 51.55
coord: 168..180
score: 50.55
IPR000223Peptidase S26A, signal peptidase ITIGRFAMTIGR02227TIGR02227coord: 87..248
e-value: 6.6E-31
score: 105.3
IPR000223Peptidase S26A, signal peptidase IPANTHERPTHR43390SIGNAL PEPTIDASE Icoord: 81..252
IPR019533Peptidase S26PFAMPF10502Peptidase_S26coord: 83..243
e-value: 3.8E-33
score: 114.8
IPR019533Peptidase S26CDDcd06530S26_SPase_Icoord: 101..242
e-value: 1.78562E-17
score: 73.0035
NoneNo IPR availableGENE3D2.10.109.10Umud Fragment, subunit Acoord: 95..254
e-value: 3.5E-29
score: 103.3
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 78..102
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 103..256
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..77
NoneNo IPR availableTMHMMTMhelixcoord: 79..101
IPR019757Peptidase S26A, signal peptidase I, lysine active sitePROSITEPS00760SPASE_I_2coord: 170..182
IPR036286LexA/Signal peptidase-like superfamilySUPERFAMILY51306LexA/Signal peptidasecoord: 99..253

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004384_piloncontigtig00004384_pilon:1345591..1346361 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8298.t1Gchil8298.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004384_pilon 1345591..1346361 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8298.t1 ID=Gchil8298.t1|Name=Gchil8298.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=257bp
MRQKGIYRSVEYVVEKLSLDGREVPSTAVVPPSRLHQVVASIRPLNPLLP
RFERAWPVHVALGDAVLWTYKQDLIRSALATIAMSVSFVVGGLLAPSVLG
IYSIPTVSMEPSLHVGDALLVEKLSLRDTPPRDGEIVLFTPPSRLQNILL
SSAQRQSSSRLPRRNDLFVKRVVAVPGDVIEVRLTGVYVNGRKVDEIVPN
SPVVEPRSIPEGFVFVVGDNPNQSLDSRYWGLLPIDCVVGRPVALIFPPQ
RLHMPV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000223Pept_S26A_signal_pept_1
IPR019533Peptidase_S26
IPR019757Pept_S26A_signal_pept_1_Lys-AS
IPR036286LexA/Signal_pep-like_sf