Gchil8332.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8332.t1
Unique NameGchil8332.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length113
Homology
BLAST of Gchil8332.t1 vs. uniprot
Match: A0A2V3IP44_9FLOR (DEAD-box ATP-dependent RNA helicase 21 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IP44_9FLOR)

HSP 1 Score: 171 bits (432), Expect = 4.070e-48
Identity = 74/111 (66.67%), Postives = 89/111 (80.18%), Query Frame = 0
Query:    2 FRFGWYESDDTPADDDIQRLGIQVPQFGRGHLGGMFDIFGFKGSVRSHLRDARHWSKKPRDQKSDREWRTFREDFLMTIRSSNAPAPNPVLDWDEIGLPPKILDLMKRVVR 112
            FRFGW ESDDT ADD+ + +G+  PQFGRG LGGM  +F  KG++ SHLRD+RHWS+KPRDQ SDR+WR FREDFL++ RSS+ PAPNP   WDE GLP +ILDL+KRV R
Sbjct:  104 FRFGWDESDDTAADDEFRHVGVPTPQFGRGRLGGMSGMFDVKGAIHSHLRDSRHWSEKPRDQMSDRDWRIFREDFLISTRSSSMPAPNPARSWDETGLPLRILDLIKRVAR 214          
BLAST of Gchil8332.t1 vs. uniprot
Match: R7QF74_CHOCR (DEAD box RNA helicase, putative n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QF74_CHOCR)

HSP 1 Score: 100 bits (250), Expect = 1.580e-22
Identity = 48/115 (41.74%), Postives = 71/115 (61.74%), Query Frame = 0
Query:    6 WYESDDTPADDDIQRLGIQVP------QFGRGHLGGMFDI--FGFKGSVRSHLRDARHWSKKPRDQKSDREWRTFREDFLMTIRSSNAPAPNPVLDWDEIGLPPKILDLMKRVVR 112
            W +S+DT A +D  R+ ++        QFGRG +GGM D+     +    S+L DARHWS+K R + +DR+WR FRED++++ R+SN   P P   WDE GLP  +L L++ V +
Sbjct:  144 WDQSEDTMAGEDEYRIMLRKQTAAATLQFGRGRIGGMSDVPASAKRTGKTSYLYDARHWSQKRRSEMTDRDWRIFREDYVISYRASNVKTPKPARSWDETGLPNSLLRLVRDVAK 258          
BLAST of Gchil8332.t1 vs. uniprot
Match: A0A2A9NSI3_9AGAR (Uncharacterized protein n=1 Tax=Amanita thiersii Skay4041 TaxID=703135 RepID=A0A2A9NSI3_9AGAR)

HSP 1 Score: 81.3 bits (199), Expect = 1.240e-15
Identity = 47/130 (36.15%), Postives = 67/130 (51.54%), Query Frame = 0
Query:    2 FRFGWYESDDTPADDD-----IQRLGIQVPQFGRGHLGGMFDIFGFK---GSVRSHLRDA-------------RHWSKKPRDQKSDREWRTFREDFLMTIRSSNAPAPNPVLDWDEIGLPPKILDLMKRV 110
            F F W   DDT  +D        R G Q+  FGRGH+ GM D  G +    S  +HL DA             RHW++KP D+ ++R+WR FREDF ++ R    P  +P+  W E  +P  IL+ ++R+
Sbjct:  211 FVFDWDAQDDTYTEDSPVAVGSNRQGAQI-MFGRGHIAGMDDGGGTRKGPASYDAHLADAMERRRAAKSGFDDRHWTEKPLDEMTERDWRIFREDFSISARGGQIP--HPLRSWVESAIPQPILECIERI 337          
BLAST of Gchil8332.t1 vs. uniprot
Match: A0A0D2VWU0_CAPO3 (DEAD box ATP-dependent RNA helicase n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2VWU0_CAPO3)

HSP 1 Score: 73.2 bits (178), Expect = 8.650e-13
Identity = 44/135 (32.59%), Postives = 62/135 (45.93%), Query Frame = 0
Query:    2 FRFGWYESDDTPAD-DDIQRLGIQVPQFGRGHLGGMFDIFGFKGSV-RSHLR---------------------------DARHWSKKPRDQKSDREWRTFREDFLMTIRSSNAPAPNPVLDWDEIGLPPKILDLM 107
            F F W   DDT  D + + +   Q   FGRGH+ G+      K S  R +L                            D RHW+ KP DQ ++R+WR  RED+   I +     P P+ +W+EIGLP +ILD++
Sbjct:  367 FLFEWDNQDDTSMDFNPLYKERHQAQLFGRGHIAGIDPTSQLKASFYRDYLSARQTQEENERVEERRREELLKESRVKFDERHWADKPLDQMTERDWRILREDY--NIGAKGGHIPRPMRNWNEIGLPTEILDII 499          
BLAST of Gchil8332.t1 vs. uniprot
Match: M2SHB2_COCSN (Uncharacterized protein n=5 Tax=Pleosporaceae TaxID=28556 RepID=M2SHB2_COCSN)

HSP 1 Score: 69.7 bits (169), Expect = 1.390e-11
Identity = 43/141 (30.50%), Postives = 63/141 (44.68%), Query Frame = 0
Query:    2 FRFGWYESDDTPAD-DDIQRLGIQVPQFGRGHLGGMFDIFGFKGSVR----------SHLRDA---------------------RHWSKKPRDQKSDREWRTFREDFLMTIRSSNAPAPNPVLDWDEIGLPPKILDLMKRV 110
            F F W E +DT  D + I +   +   FGRG LGG  +    K + R           H R+                      +HWS+K  +   +R+WR F+EDF   I +     PNP+ +WDE GLP K++ ++ RV
Sbjct:  161 FNFEWNEEEDTSHDYNPIYQQKAEASFFGRGRLGGFSEEVTDKATQRMIEAIIERDPEHGRERAQQMIDMERRRKEKGGRAQLDKHWSEKRLENMRERDWRIFKEDF--NIATKGGSIPNPMRNWDEAGLPDKLMRIVDRV 299          
BLAST of Gchil8332.t1 vs. uniprot
Match: A0A517KVZ1_9PEZI (mRNA splicing protein prp28 n=3 Tax=Venturia TaxID=5024 RepID=A0A517KVZ1_9PEZI)

HSP 1 Score: 69.7 bits (169), Expect = 1.410e-11
Identity = 48/139 (34.53%), Postives = 63/139 (45.32%), Query Frame = 0
Query:    2 FRFGWYESDDTPADDD-IQRLGIQVPQFGRGHLGGMFDIFGF--KGSVRSHLRDAR---------------------------HWSKKPRDQKSDREWRTFREDFLMTIRSSNAPAPNPVLDWDEIGLPPKILDLMKRV 110
            F F W   +DT  D + I    I+   +GRGHLGGM D  G   K +    L DAR                           HWS+K      +R+WR F+EDF   I +     PNP+ +W E GLP KIL+L+ +V
Sbjct:  247 FNFEWNVEEDTSVDHNPIYTSQIEANFYGRGHLGGM-DADGKTDKYAKAVELLDARAGTQRAQEIVDMARQSKENSRRTALDKHWSEKNLKDMRERDWRIFKEDF--NISTKGGAIPNPMRNWQESGLPSKILNLVHQV 382          
BLAST of Gchil8332.t1 vs. uniprot
Match: W9XNY1_9EURO (RNA helicase n=1 Tax=Capronia coronata CBS 617.96 TaxID=1182541 RepID=W9XNY1_9EURO)

HSP 1 Score: 68.2 bits (165), Expect = 4.910e-11
Identity = 44/141 (31.21%), Postives = 63/141 (44.68%), Query Frame = 0
Query:    2 FRFGWY-ESDDTPADDDIQRLGIQVPQFGRGHLGGMFDIF----------------GFKGSVRSH---------------LRDARHWSKKPRDQKSDREWRTFREDFLMTIRSSNAPAPNPVLDWDEIGLPPKILDLMKRV 110
            F F W  E D TP  + I     Q   FGRG LGG  D                  G  G+ R+                +   +HWS+K  DQ  +R+WR F+EDF   I +     PNP+ +W E GLP ++L+++++V
Sbjct:  267 FNFEWNTEEDTTPDYNPIYNDRAQPTFFGRGRLGGFDDQLAEDAARKYAEALQSRDGEAGAARAQEILEMERRRKEESNRMAIDKHWSEKRLDQMRERDWRIFKEDF--NISTKGGGIPNPMRNWQESGLPRRLLEIIEQV 405          
BLAST of Gchil8332.t1 vs. uniprot
Match: A0A7R8ZN41_9CRUS (RNA helicase n=1 Tax=Cyprideis torosa TaxID=163714 RepID=A0A7R8ZN41_9CRUS)

HSP 1 Score: 66.6 bits (161), Expect = 1.680e-10
Identity = 38/130 (29.23%), Postives = 64/130 (49.23%), Query Frame = 0
Query:    2 FRFGWYESDDTPAD-DDIQRLGIQVPQFGRGHLGGMFDI--------------------FGFKGSVRSHLRDARHWSKKPRDQKSDREWRTFREDFLMTIRSSNAPAPNPVLDWDEIGLPPKILDLMKRV 110
            F F W   +DT  D + + +   QV  FGRGH+GG+ D+                    F  K        D RHW++KP D  ++R+WR FRED+ ++++    P  +P+  W E  L P++ +++ ++
Sbjct:  209 FVFDWDAGEDTSDDYNPLYKEKHQVQLFGRGHIGGI-DVKQQKKEHACLRLFLVLNQADFFVKKKEDKQKWDDRHWTEKPLDAMTERDWRIFREDYNISVKGGRIP--HPIRFWKETELNPELNEIIDKL 335          
BLAST of Gchil8332.t1 vs. uniprot
Match: M2Y012_GALSU (ATP-dependent RNA helicase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y012_GALSU)

HSP 1 Score: 66.6 bits (161), Expect = 1.690e-10
Identity = 39/120 (32.50%), Postives = 58/120 (48.33%), Query Frame = 0
Query:   23 IQVPQ-FGRGHLGGM-------------------FDIFGFKGSV----------RSHLRDARHWSKKPRDQKSDREWRTFREDFLMTIRSSNAPAPNPVLDWDEIGLPPKILDLMKRVVR 112
            ++VP  FGRGH GGM                    D+ G   S             H +D RHWS+KP+++ ++R+WR FRED  +  R   AP P    +W+E GLP  +LD ++ + +
Sbjct:  246 VEVPLLFGRGHRGGMDPASTPSKAPSKRVTRPKVSDMEGVPDSRLDMTLEDPVHHRHKKDMRHWSEKPKEEMTERDWRIFREDHSIAYRGGKAPFP--ARNWEETGLPRVLLDSVRYIAK 363          
BLAST of Gchil8332.t1 vs. uniprot
Match: A0A6A6AQ40_9PLEO (DEAD-domain-containing protein n=1 Tax=Dothidotthia symphoricarpi CBS 119687 TaxID=1392245 RepID=A0A6A6AQ40_9PLEO)

HSP 1 Score: 66.6 bits (161), Expect = 1.690e-10
Identity = 43/141 (30.50%), Postives = 59/141 (41.84%), Query Frame = 0
Query:    2 FRFGWYESDDTPAD-DDIQRLGIQVPQFGRGHLGGMFDIFGFKGS------------------------VRSHLRDA-------RHWSKKPRDQKSDREWRTFREDFLMTIRSSNAPAPNPVLDWDEIGLPPKILDLMKRV 110
            F F W E +DT  D + I +   +   FGRG LGG  D    + S                        +    RD        +HWS K  +   +R+WR F+EDF   I +     PNP+ +W E GLP KIL L+  +
Sbjct:  227 FNFEWNEDEDTSLDYNPIYQQRAEANFFGRGRLGGFTDATTDESSHKFIDAMVERDPESGRARAEAILDMERRRRDEGGRAQLDKHWSDKRLEHMRERDWRIFKEDF--NIATKGGAIPNPMRNWQESGLPDKILSLVDHI 365          
The following BLAST results are available for this feature:
BLAST of Gchil8332.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IP44_9FLOR4.070e-4866.67DEAD-box ATP-dependent RNA helicase 21 n=1 Tax=Gra... [more]
R7QF74_CHOCR1.580e-2241.74DEAD box RNA helicase, putative n=1 Tax=Chondrus c... [more]
A0A2A9NSI3_9AGAR1.240e-1536.15Uncharacterized protein n=1 Tax=Amanita thiersii S... [more]
A0A0D2VWU0_CAPO38.650e-1332.59DEAD box ATP-dependent RNA helicase n=1 Tax=Capsas... [more]
M2SHB2_COCSN1.390e-1130.50Uncharacterized protein n=5 Tax=Pleosporaceae TaxI... [more]
A0A517KVZ1_9PEZI1.410e-1134.53mRNA splicing protein prp28 n=3 Tax=Venturia TaxID... [more]
W9XNY1_9EURO4.910e-1131.21RNA helicase n=1 Tax=Capronia coronata CBS 617.96 ... [more]
A0A7R8ZN41_9CRUS1.680e-1029.23RNA helicase n=1 Tax=Cyprideis torosa TaxID=163714... [more]
M2Y012_GALSU1.690e-1032.50ATP-dependent RNA helicase n=1 Tax=Galdieria sulph... [more]
A0A6A6AQ40_9PLEO1.690e-1030.50DEAD-domain-containing protein n=1 Tax=Dothidotthi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004384_piloncontigtig00004384_pilon:2072171..2072509 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8332.t1Gchil8332.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004384_pilon 2072171..2072509 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8332.t1 ID=Gchil8332.t1|Name=Gchil8332.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=113bp
MFRFGWYESDDTPADDDIQRLGIQVPQFGRGHLGGMFDIFGFKGSVRSHL
RDARHWSKKPRDQKSDREWRTFREDFLMTIRSSNAPAPNPVLDWDEIGLP
PKILDLMKRVVR*
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