Gchil8145.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8145.t1
Unique NameGchil8145.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length216
Homology
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BLAST of Gchil8145.t1 vs. uniprot
Match: A0A2V3IM68_9FLOR (DUF4203 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IM68_9FLOR)

HSP 1 Score: 328 bits (842), Expect = 2.880e-112
Identity = 165/214 (77.10%), Postives = 192/214 (89.72%), Query Frame = 0 
Query:    1 MAVIDAVPDGYATSPGHMLYIPAGLLMLFFGGFLVKASLCVVSCLLVSRFVYTLVDAMKLEPLFAVVIVSLTAVITFLLVLEACEQGPDFATGVVLGACIALTFYPAPVLSVLLSVLVLSAAFGFVFAQAPKEVGIFITSYGGAYMIFYGMELIDSQVFEGSKLLPEFVESDNIDMWFSVLSFLVVGLLGCCVQLILVSGQAQPSYSRSHYIEI 214
            MAVID + D YA S GHMLYIPAGLLMLFFGGFLVK SLCV+SC++VSRFVY L+ ++  +P+ AV  V++ AVITF+LVLE CEQGPDFATG VLG CIALTFYPAP+LS++++V+VLSAAFG VF+  PKEVGIFI+SYGGAYMIF+GMELIDS VF+GS ++PEFV+SDNIDMWFSVLSF+VVGLLGCCVQLILVSGQAQP+YSRSHYIEI
Sbjct:    1 MAVIDPLADPYAPSAGHMLYIPAGLLMLFFGGFLVKPSLCVISCVIVSRFVYALITSVSSDPILAVAAVAIAAVITFMLVLEICEQGPDFATGAVLGVCIALTFYPAPMLSLIMAVVVLSAAFGLVFSLVPKEVGIFISSYGGAYMIFFGMELIDSDVFDGSSVIPEFVKSDNIDMWFSVLSFMVVGLLGCCVQLILVSGQAQPAYSRSHYIEI 214
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BLAST of Gchil8145.t1 vs. uniprot
Match: R7QQJ5_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQJ5_CHOCR)

HSP 1 Score: 270 bits (691), Expect = 2.320e-89
Identity = 136/206 (66.02%), Postives = 167/206 (81.07%), Query Frame = 0 
Query:    9 DGYATSPGHMLYIPAGLLMLFFGGFLVKASLCVVSCLLVSRFVYTLVDAMKLEPLFAVVIVSLTAVITFLLVLEACEQGPDFATGVVLGACIALTFYPAPVLSVLLSVLVLSAAFGFVFAQAPKEVGIFITSYGGAYMIFYGMELIDSQVFEGSKLLPEFVESDNIDMWFSVLSFLVVGLLGCCVQLILVSGQAQPSYSRSHYIEI 214
            D Y  + G ++YIPAGLLMLFFGGFLVKA+LC++SC LV   V+       L+ +  +++V+L+A+ TF  VLEAC+QGPDFATG VLG CIALTFYPAP+LS++L+V++LSAAFG  FA  PKEVGIF++SYGG +MIFYGMELIDS VFEGS+ +P FV  D+IDMWFSVLSFLVVGLLGCCVQLIL SGQA   +SR HY++I
Sbjct:    4 DEYGPTAGRLMYIPAGLLMLFFGGFLVKAALCLISCALVGHLVFIAAVQAGLQYIPVILLVALSALATFAAVLEACDQGPDFATGAVLGTCIALTFYPAPILSIVLAVIILSAAFGLAFALVPKEVGIFLSSYGGGFMIFYGMELIDSDVFEGSRPVPAFVRVDSIDMWFSVLSFLVVGLLGCCVQLILFSGQANSGFSRYHYVDI 209
The following BLAST results are available for this feature:
BLAST of Gchil8145.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IM68_9FLOR2.880e-11277.10DUF4203 domain-containing protein n=1 Tax=Gracilar... [more]
R7QQJ5_CHOCR2.320e-8966.02Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..51
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 128..133
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 174..198
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 83..93
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 199..215
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 63..82
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 94..127
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 52..62
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 155..173
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 134..154
NoneNo IPR availableTMHMMTMhelixcoord: 20..42
NoneNo IPR availableTMHMMTMhelixcoord: 63..85
NoneNo IPR availableTMHMMTMhelixcoord: 134..156
NoneNo IPR availableTMHMMTMhelixcoord: 105..127
NoneNo IPR availableTMHMMTMhelixcoord: 176..198

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004384_piloncontigtig00004384_pilon:190908..191555 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8145.t1Gchil8145.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004384_pilon 190908..191555 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8145.t1 ID=Gchil8145.t1|Name=Gchil8145.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=216bp
MAVIDAVPDGYATSPGHMLYIPAGLLMLFFGGFLVKASLCVVSCLLVSRF
VYTLVDAMKLEPLFAVVIVSLTAVITFLLVLEACEQGPDFATGVVLGACI
ALTFYPAPVLSVLLSVLVLSAAFGFVFAQAPKEVGIFITSYGGAYMIFYG
MELIDSQVFEGSKLLPEFVESDNIDMWFSVLSFLVVGLLGCCVQLILVSG
QAQPSYSRSHYIEIL*
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