Gchil3141.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil3141.t1
Unique NameGchil3141.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length417
Homology
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BLAST of Gchil3141.t1 vs. uniprot
Match: A0A2V3IMI9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMI9_9FLOR)

HSP 1 Score: 311 bits (798), Expect = 2.220e-96
Identity = 182/399 (45.61%), Postives = 253/399 (63.41%), Query Frame = 0 
Query:    2 RKKVSLYRGLKVLTCTNPLYRKVLNYRYYRLKVKSKKRSGCETAKIKDHIKRLKIGLNDLTFDGKTPILVIEFLNRFVAEADTLEMSEPQAFLSLPHFLKGFALEQYRSVCGSLTADEGGVTSWPEAVQYLLRSYSTSNAIRQAILDLRDVTQKPEKGEAKYNSRLNKASVRCGNVHSTEDKTTLYIDGLDQSIKSLVARYRGKHGRVSFLELVQFAKAEGDAVRAR-GSPRRSVAFGTSMGSDSHEEA-------------------VHLMEYTDSSVPTVDLPHS---ESQDEETLMAMEGRRPMYRPYTVPPQGGFKNGKPGWVDTRTAYRSQ-PMLTNRRDGLICYSCYGKHHLSAECTLPAKDLSRIMTNYEALSEEERSRVPAGMYWKAKSWF 376
            R+K   + GLK L  TN LYR++L+YRYYRL+  S +R+   T ++KD IKRL++ L    F G+ PIL+++FL RFVAEAD L MSE QA+++LP+FL+G A +Q+ SV GS  A EGGVT WPEAVQYLLRSY+T NAI+ AIL LRD  QK E+ E  Y++RL KA  RCGNV+S +++ T+++DGLD +I++LVAR+R    R+++LELVQFA+AEGDA+RAR G+  RS       G   H EA                   +HL++ +DSSVPT +LP +    + D +  M      P     TVP   G +  +PGW D       + P + ++   +IC+ CY   H+S  C L  KD+++++ NYEAL+  E+ RVPA  Y +A+S F
Sbjct:  250 REKGRKHLGLKELKPTNLLYRRLLSYRYYRLEDSSMERTPRGTGRLKDCIKRLELTLRKHQFTGEDPILILDFLARFVAEADILGMSEAQAYIALPYFLRGMAEDQFNSVRGSSRATEGGVTCWPEAVQYLLRSYATGNAIQAAILALRDTRQKSEESETAYSTRLTKAFHRCGNVYSAQERCTMFVDGLDPTIRTLVARHREDRRRITYLELVQFAQAEGDALRARKGTKHRS-------GKVLHLEARQVPSPPLTRRTDHGMYDNMHLLQ-SDSSVPTTELPSTTEPSTGDVDPAMYAGNHVPGL---TVPYSSGTRTQRPGWKDPYPPRSDRRPHIADQLRHIICHLCYKPGHVSTNCYLLMKDMAKVIVNYEALTPAEKERVPASAYLRARSVF 637
The following BLAST results are available for this feature:
BLAST of Gchil3141.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IMI9_9FLOR2.220e-9645.61Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005162Retrotransposon gag domainPFAMPF03732Retrotrans_gagcoord: 97..192
e-value: 3.8E-5
score: 23.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004382_piloncontigtig00004382_pilon:435891..437237 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3141.t1Gchil3141.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004382_pilon 435891..437237 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil3141.t1 ID=Gchil3141.t1|Name=Gchil3141.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=417bp
MRKKVSLYRGLKVLTCTNPLYRKVLNYRYYRLKVKSKKRSGCETAKIKDH
IKRLKIGLNDLTFDGKTPILVIEFLNRFVAEADTLEMSEPQAFLSLPHFL
KGFALEQYRSVCGSLTADEGGVTSWPEAVQYLLRSYSTSNAIRQAILDLR
DVTQKPEKGEAKYNSRLNKASVRCGNVHSTEDKTTLYIDGLDQSIKSLVA
RYRGKHGRVSFLELVQFAKAEGDAVRARGSPRRSVAFGTSMGSDSHEEAV
HLMEYTDSSVPTVDLPHSESQDEETLMAMEGRRPMYRPYTVPPQGGFKNG
KPGWVDTRTAYRSQPMLTNRRDGLICYSCYGKHHLSAECTLPAKDLSRIM
TNYEALSEEERSRVPAGMYWKAKSWFSQTPMRRTDKQVVQNAEVLQPGTP
VGRGAFEANKPVQPEN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005162Retrotrans_gag_dom