Gchil3219.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil3219.t1
Unique NameGchil3219.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length130
Homology
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BLAST of Gchil3219.t1 vs. uniprot
Match: A0A2V3J064_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J064_9FLOR)

HSP 1 Score: 105 bits (262), Expect = 8.550e-27
Identity = 62/115 (53.91%), Postives = 76/115 (66.09%), Query Frame = 0 
Query:   18 EEVVSNTPPQKLG-------KHGVKLFIIACVLSVILFTSCIIAGIVVALLRNDLTNTVSDYALKHVLVPLLGIFGGSLVLLILAYFRYRKLN----SKDGDMNVSNDDHGKTID 121
            EE     PPQ          K G+KLFI+  VLS+ILFTSCII G+VVALLRN+LTN  SDYALKHV +PL  IF  SLVL++ AYFRYR LN    +++ +  V +DD G + D
Sbjct:    8 EEAGVANPPQDAPITSLPRMKPGMKLFIVTGVLSIILFTSCIITGVVVALLRNNLTNIASDYALKHVFLPLAAIFAASLVLMVAAYFRYRSLNQPKSTQEEEHEVKDDDTGTSSD 122
The following BLAST results are available for this feature:
BLAST of Gchil3219.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J064_9FLOR8.550e-2753.91Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 73..97
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..35
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 36..61
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 98..129
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 62..72
NoneNo IPR availableTMHMMTMhelixcoord: 36..58
NoneNo IPR availableTMHMMTMhelixcoord: 78..97

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004382_piloncontigtig00004382_pilon:1050215..1050604 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3219.t1Gchil3219.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004382_pilon 1050215..1050604 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil3219.t1 ID=Gchil3219.t1|Name=Gchil3219.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=130bp
MSLREPDAVPQDTNATTEEVVSNTPPQKLGKHGVKLFIIACVLSVILFTS
CIIAGIVVALLRNDLTNTVSDYALKHVLVPLLGIFGGSLVLLILAYFRYR
KLNSKDGDMNVSNDDHGKTIDLKGGEDIP*
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