Gchil3798.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil3798.t1
Unique Name	Gchil3798.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	842

Homology

[Close]

BLAST of Gchil3798.t1 vs. uniprot
Match: R7QIX0_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIX0_CHOCR)

HSP 1 Score: 178 bits (452), Expect = 1.030e-42
Identity = 140/373 (37.53%), Postives = 193/373 (51.74%), Query Frame = 0

Query:    6 RPIAMPFLQGSAPWLKDYVIGALSESPKIPSLNASYLLATSPVSHRRSVSCFDGAHSVRVVLSQSVASALDADEEGTGVTTRNLLGYVLAPVQAIVLTDMTTSPPSATLLLKDVRVFCDRRHQRPPGIALQVDKDPEVVTALRANIGRQLAAF-------NDLPDRGDQHQNDAEFVQVLKSLEKECPPLPPQTLI-NERNVFGLSS----------ADDPVLENGIANGSPVLRDDENVELA----IDPKDLELLEPDPLPILGT---DTTGSGTPQITAKSGVAQTPGADNEAQDVARNEAVSEERIAQEQENLHGLQSGLLEQSKKTVAHEAEEHHAPFTEEDRPLTQHFAFEDYIQLDEDISVKGTSDS 353
            R   M  +    PWLK Y++ ALS +P+  SL+ SYL   S V+ RR +  +DG H+   VLSQ+ AS LDAD +  GVTT NL+GY++APV A+V+ D +T+PP+ATL+L+DVRVF D+  QRPPG    VD+DPEV+  LRA++GR+LA F        D  D GD H   AE   V  ++  + P LPP+ ++ N  N   L S          AD P   N  AN SP  +D +    A     D  + E+ E D   +LG    D    G P+     G +Q     +E +         EER A E+E++         Q +  V  E  EH    + E  PLTQHF  +D    DE+   +G +D+
Sbjct:   54 RHRTMSHMSTCTPWLKPYLMHALSPTPRSSSLDGSYLQVISAVTARRKLRVYDGLHTAEAVLSQAAASNLDADVDDLGVTTHNLVGYLVAPVAAVVVPDASTTPPTATLVLQDVRVFADQFAQRPPGALPPVDRDPEVLDCLRASVGRKLATFATRSTFARDEVDAGDAHL--AELTDVFDNI-LDNPALPPKAVVDNLANFRSLHSDAPLPHSPAAADKPAPSND-ANPSPGKKDLQTTTNAERDVFDESEDEMPELDMHHVLGVQNGDDEDKGDPK--GNEGASQNDQDMSEKKSSGXXXXXXEER-AGEEEDVGDWDIRFSSQEQADV--EGGEHEC-ISGEAMPLTQHFPIDD----DEEEDAEGKADA 412

The following BLAST results are available for this feature:

BLAST of Gchil3798.t1 vs. uniprot

BLAST of Gchil3798.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
R7QIX0_CHOCR	1.030e-42	37.53	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 250..270
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 370..395
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 644..671
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 250..315
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 279..293
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 467..538
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 799..841
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 438..464
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 733..769
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 615..637
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 693..710
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 346..360
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 580..602
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 346..769

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000010_pilon	contig	tig00000010_pilon:461260..463785 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil3798.t1	Gchil3798.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00000010_pilon 461260..463785 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil3798.t1 ID=Gchil3798.t1|Name=Gchil3798.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=842bp
MALLQRPIAMPFLQGSAPWLKDYVIGALSESPKIPSLNASYLLATSPVSH
RRSVSCFDGAHSVRVVLSQSVASALDADEEGTGVTTRNLLGYVLAPVQAI
VLTDMTTSPPSATLLLKDVRVFCDRRHQRPPGIALQVDKDPEVVTALRAN
IGRQLAAFNDLPDRGDQHQNDAEFVQVLKSLEKECPPLPPQTLINERNVF
GLSSADDPVLENGIANGSPVLRDDENVELAIDPKDLELLEPDPLPILGTD
TTGSGTPQITAKSGVAQTPGADNEAQDVARNEAVSEERIAQEQENLHGLQ
SGLLEQSKKTVAHEAEEHHAPFTEEDRPLTQHFAFEDYIQLDEDISVKGT
SDSSEAPSIEELQLGTVFDVPDDDGEKRDVPCDTRGEDDRGSKRAGNGTG
ELQLAPKHANNPKKSTLAKLGTFGAQRDKGADSSRITLPASGDGQATANI
MAITRATRSTAKKVSPDVRQPGEDPENLPEKDENDPAVDRDATENVDNLN
EGVLDLDKEPNASRAEKEDVDEPASEIAAKESKSGDAEGEELPQPSSPRV
KTQRAAGPVMQTEGERDGNDGNVELSETGNERGKPPENDVVNEPEKETEA
AEKAMLANPFPVEAVDEGEKQHVHEEQKGERLDTDMVQTVPDKVSEKVSE
KAPEKAPEKAPEKAPEKAPEEAPEEAPEEAPENVHEEQEVWVVEQETQMS
VQVNVSNKTGEKATRSKKRPSPVAPAAVIADEIEPVDLKKGSAREGERAA
KQEQADFGRKSKRRRNNEDYHVIKAKAELQYLRDFRRKVDGDTEMFILNP
EHFLPRKTRRSVDRGSGESYPPPRMGDSVEVGNGKNDSATR*