Gchil3122.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil3122.t1
Unique NameGchil3122.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length1492
Homology
BLAST of Gchil3122.t1 vs. uniprot
Match: R7QA78_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QA78_CHOCR)

HSP 1 Score: 106 bits (264), Expect = 2.900e-19
Identity = 168/644 (26.09%), Postives = 256/644 (39.75%), Query Frame = 0
Query:  499 PSRRDHVNRYSSQESRVHEHGSY-GRRRRTYVERS-DYDGPKENESREEWLERRRRKTETRDAVRSVIDHIINRAVYGDRRRGRRAYPRRPATSSTGLRVKRDSSKRDAPLDPGDLTSLVRPEVSPIRDQQKVITEASTLSFDSATSTQ--PELRSRRVDLPSEGEAKETESRTAPPMSKPPRSLTFPEESQRQXXXXXXXXXLRPAPWAPK-PSDAKRLQNTISPVTAQIRAEAAQQAAKALKIGNRSEQQSGNSVASHAAASASSNLLEELGARSNLESARPSEQIRKESAANWAYAKRTPSRGDSSQRNEGSSYVRQSVNRTAAPTSYKDGSVTISSSLGGNVRGLMKSTTRRVAGKEGQGYVLTQDGNVGRTVRKSSQNARAELEHSLGVPRIERLGKAEFNRHSRRELSDRSDELEENFNKDSNLADVNRKAISRNSEDVTRKPFAEDDAEESRAWAEGSRASPPTSFDEITRAFLNQPAVFPLVGAPLLPPVPVVQALGSCAPPGSSSQYGNASN--SWSENKQWSPARKHAEHASAPWWGAPNSGT---EGQTITENRDPTH-----------------REFVPPTDRADVFGTKDKGPVLDSATRNGTSGQSRAERNTHPLKVRSRKTHRNSRKPK 1115
            P+RR  V R +  E     H    G ++R +  R+ +YDGP  NESRE+WLERRRR+TE R+ V+S++   ++RAVYG +   +R Y RR ++ S     ++D ++      PG  T    PE +P +        +  +  +SA+  Q  P+  +    LP+           AP                           LRPAPWAPK P  +   +N     T  +  +A+       KI + S +QS            SS  L+    +S++ S    +Q R  S A             S+ RN       QS   + A    +  SVTI +  GG +R + +    R A ++G G               +   A    +     PR  R GK +  R  RR    +SD+   +         V           +T      D  +ES AWA  +    P SFD ITRAF NQPA FPLVGAPLLP       + +  P   S+   N SN  +W+ +  W+  +K  +     WW + ++ +   E  T+ +     H                 R   P T   +   T  +GP+  + +  GT  + +  R     K+      + S++PK
Sbjct:  122 PARRSGVTRNAGSEHTPTPHRPQDGTKQRRHPYRAREYDGPAANESREQWLERRRRETEIRNVVKSILQMCVHRAVYGIKPGPKRPYGRRGSSQSAQHPRRKDYNRPRWTGSPGSKT----PESAPGKPSAPAPAASPEVRRNSASKPQSRPQQAALAKPLPAXXXXXXXXXXVAP-------------------------APLRPAPWAPKAPGSSPETKNVHGSRTEGLPVDAS-------KIEDWSMRQS----------QVSSPSLDPTPMQSSVPSR---QQPRSRSGAGHV--------PPSAVRNIIPVKASQSSKASGADRQLEVDSVTIPAPSGG-IRVVQRPDRGRGANRQGPGGSAVLSNGKNLLSGAAVTPANGPFDKPRYAPR-RRGGKLDVPRRDRRAPYRKSDDARASGEDQRGGYGV----------PLTSHSIPLDAKQESEAWAANNGPKQPASFDAITRAFSNQPAPFPLVGAPLLPLXXXXXXIST--PDEGSASTANDSNRGAWNASGTWTGTQKEVK---TDWWQSKSNNSNSFEKDTVKKPSSRNHANKSLKSNGAPGQKKDRRMLQPETGATEQKTTTPRGPI-GTRSEGGTKQRRKQTRARKAKKLSPEIVEQTSKEPK 690          
The following BLAST results are available for this feature:
BLAST of Gchil3122.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R7QA78_CHOCR2.900e-1926.09Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 248..308
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1008..1022
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1306..1389
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1158..1491
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 937..954
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1166..1199
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 795..825
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1459..1477
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 937..963
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 457..487
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1051..1073
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1268..1285
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1204..1225
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 711..725
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 737..767
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 651..667
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1008..1144
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 106..122
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..66
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 123..137
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 163..177
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1099..1115
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 627..650
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 578..825
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 398..429
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1410..1452
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..203
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 488..536
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1081..1095
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 301..536
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1122..1144

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004382_piloncontigtig00004382_pilon:247729..252204 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3122.t1Gchil3122.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004382_pilon 247729..252204 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil3122.t1 ID=Gchil3122.t1|Name=Gchil3122.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=1492bp
MKRQSYLGPTRRLPKAPLPFNLPSLRREAGGDGAGGGIAGAGAKWASPRT
EAAEENREEENFDERSVPAKTAWGGAGLRTRTQPDFPELSRPGPAPLGSA
AKTSKKSEETNAEKESEDKQESLVAKSSTSSSTTPKPVVEEDDWAEDDSG
MDFTAEVSLPEVNIPDVPPPPARTIPSLPSSPASLTPRFIPGHGLQRRNP
VVPPPAAHWAHAIKLQQMERHSDPRGRPVLRARESDVNHGSPAVGIDLKL
LEEQKSIMKTKAEVAQEARRKAEAERERVQKERAAKKLRELEERLRLKEE
RRKAEQAATRKPAAHSPGLGIRRPTTQTAAPPDFSGALNRRNVGVKAQAP
FAVPDRAGSRPVLLQRPREEMKQTAPGGDRSIVPSGRGQMGTRGETQAAK
DHIQTLVSTQRPKDSPSLSTSIQKPPTVNSPIPTAAPASVDLRMQSSRRS
DESAGFLRTDTESPASNALPTPTILRQTRSSARTLETAKNGFERRRASPS
RRDHVNRYSSQESRVHEHGSYGRRRRTYVERSDYDGPKENESREEWLERR
RRKTETRDAVRSVIDHIINRAVYGDRRRGRRAYPRRPATSSTGLRVKRDS
SKRDAPLDPGDLTSLVRPEVSPIRDQQKVITEASTLSFDSATSTQPELRS
RRVDLPSEGEAKETESRTAPPMSKPPRSLTFPEESQRQTQRREAPPPLRP
APWAPKPSDAKRLQNTISPVTAQIRAEAAQQAAKALKIGNRSEQQSGNSV
ASHAAASASSNLLEELGARSNLESARPSEQIRKESAANWAYAKRTPSRGD
SSQRNEGSSYVRQSVNRTAAPTSYKDGSVTISSSLGGNVRGLMKSTTRRV
AGKEGQGYVLTQDGNVGRTVRKSSQNARAELEHSLGVPRIERLGKAEFNR
HSRRELSDRSDELEENFNKDSNLADVNRKAISRNSEDVTRKPFAEDDAEE
SRAWAEGSRASPPTSFDEITRAFLNQPAVFPLVGAPLLPPVPVVQALGSC
APPGSSSQYGNASNSWSENKQWSPARKHAEHASAPWWGAPNSGTEGQTIT
ENRDPTHREFVPPTDRADVFGTKDKGPVLDSATRNGTSGQSRAERNTHPL
KVRSRKTHRNSRKPKRGIAGNNEKTLQRSGEEPQSQSANLNNGTFNVTES
DILDYKKGAPLGGFHSLASSETSTGLRPSSHIQASKIMSKAQLETGNLKQ
AGNAEDVHRTEDGKTSKEMVDENISTKKPSTRLGSEGAGLVNRGQETPSV
SRKPRRSAARGKRYHQGGHPRREASKSEDEDRKPSSNTSNAGLKNGDAGA
SGNRDYLSSEDRNQNEVQQNKAVQGSKTSGRHIVGTTTKEAQAENKGVQG
DHQPCNTSYLEGGMNATQEPLRISESNTNAKQSPGQVISAKAPNEVDCPD
TKNMKENRVSKESQVASNASVSSPSNMGSVVNESRARNADNEQGNSNFGA
PPNPKGQGGRRWRRGRGRGRGRGRGGFRRRDRVQSSQRTEE*
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