Gchil3203.t2 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil3203.t2
Unique NameGchil3203.t2
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length97
Homology
[Close]
BLAST of Gchil3203.t2 vs. uniprot
Match: A0A2V3IU71_9FLOR (Sucrose transport protein SUT4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IU71_9FLOR)

HSP 1 Score: 56.2 bits (134), Expect = 4.180e-7
Identity = 25/31 (80.65%), Postives = 29/31 (93.55%), Query Frame = 0 
Query:   56 RLPVSRNRMYLMVMADFGLSFVWLCKYAVAT 86
            R  VSR+RMY+MV+ADFGL+FVWLCKYAVAT
Sbjct:   60 RQAVSRSRMYMMVLADFGLAFVWLCKYAVAT 90
The following BLAST results are available for this feature:
BLAST of Gchil3203.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IU71_9FLOR4.180e-780.65Sucrose transport protein SUT4 n=1 Tax=Gracilariop... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..55
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..55
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 12..32
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 92..96
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 65..91
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..64
NoneNo IPR availableTMHMMTMhelixcoord: 72..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004382_piloncontigtig00004382_pilon:890962..891361 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3203.t2Gchil3203.t2Gracilaria chilensis NLEC103_M9 malemRNAtig00004382_pilon 890962..891361 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil3203.t2 ID=Gchil3203.t2|Name=Gchil3203.t2|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=97bp
MVSVEEGLSSEAAEQPETSAPAPNSQHYDQKDQQQGSGEHEVKPNSSAEE
RYQPERLPVSRNRMYLMVMADFGLSFVWLCKYAVATLVHFFRISFG*
back to top