Gchil3207.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil3207.t1
Unique NameGchil3207.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length1002
Homology
BLAST of Gchil3207.t1 vs. uniprot
Match: UPI001E1D3E38 (uncharacterized protein LOC123544752 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D3E38)

HSP 1 Score: 473 bits (1217), Expect = 3.320e-152
Identity = 251/582 (43.13%), Postives = 354/582 (60.82%), Query Frame = 0
Query:  301 VMVMAKRNYKVFADFGLSNQFMVRQISVLDTGAAPNLIHVELLPP-LLRVQVRTGPRLDIADANNNPLRTLGIISVMVRLGSYLVQLEFIVCKSLAAPVILGCDFCDRFVEAIRPRNRTVELEDGSTIPIV---RKPLQGAARTRVPLPVAQKSVKKDPVSTRVKVAKAVAIPPETQVWVTVVTKQIVVHVVQPNPSLYTRRQLALSNGVVSVEPDKPFKVLVANFGKTTQHLVKHQILGSVLPHPHAVVPTKISIAEVLGVADPKEGEDTAEIAKDGEHTTAAPHAEHFKPQEVTAPITGADQMDPVQELEKWDLNHVPASHREKLRHMLREFTPMWDGSLGTIGITEHRIDLIPNTRPIAQHPYRAGPKAREEEKSQVEKMLKAGVIEPVQSAWASPVVLVPKPDGSWRFCIDYRRLNEVTIKDVYPIPRMDEYIDSLGSATVFSTLDANSGYWQVPIREEDRDKTVFVCHQGLFRFRKMPFGLTNAPAKFQRAIDILLAPFKWRTCLVYLDDILVFSNNLDDHLKHVRDVMKILRDAGITLKLKKCEFFTDSVKYLGHIIRPGQLSIDEVRVKSLKEAK 878
            V V+   NY+V    GL+ + M   ++VLDTGA PNLI   +LP    + +V T     I DAN   L+  G++ + ++LG  +V+    V   L+ P ILGCDF DR V+AI P+ R + L D   IP++   +K +    +        +K    D  ST+V++A+A  + P  +  V+V +    +  + P   + +  + ++SNG+  +    PF V VANFG     L K+ ++G   PHP  ++        ++G  D     D  ++ ++ EH   A  A      +  AP +  D++D      +W         +EK+  +L  ++ MWDGSLG I  T+HRI LIP ++P+  HPYRAGPKARE E+ +VE+MLKA VIEP  S WASPVVLVPKPDGS RFC+DYR+LN +T+KD YP+PRMDE IDSLG A +FSTLD NSGYWQ+PI EEDRDKT F  H G +RF +MPFGL NAPA FQR++DI+L+  KW++CLVYLDD++VFS  +++H  H+++V  +L  AGITLK  KC FF D+V YLGH+I PG+L+I      +LK+ +
Sbjct:   24 VCVLKSANYRVSIAAGLTTRVMTPIVAVLDTGAGPNLIRESVLPDGWEKYRVHTSWNRRIVDANGKALKFRGVVQLALQLGELVVRTRLAVVSHLSVPCILGCDFIDRHVKAIVPKERRILLNDAKPIPLLPPGQKTIPPGEKDS-----GEKKPSSDTPSTKVRLARAATLAPGAETVVSVQSDARGICFLLPKRDIRSAPRTSMSNGIQDICSRVPFLVKVANFGGDEIFLPKNAVIGYAFPHPTCII-------SLVG-EDDTNVPDLPDLVEEEEHPLEANDASEETKVQDEAPKSWRDEVDLPTLQGEW---------KEKVMTLLERYSHMWDGSLGEIKATKHRIQLIPGSKPVHSHPYRAGPKAREMERQEVERMLKADVIEPACSEWASPVVLVPKPDGSLRFCVDYRKLNSITVKDTYPLPRMDESIDSLGDAAIFSTLDCNSGYWQIPINEEDRDKTTFTSHVGAYRFIRMPFGLCNAPATFQRSLDIILSRVKWKSCLVYLDDVIVFSRTIEEHFGHLQEVFSLLERAGITLKFSKCHFFKDTVDYLGHVIVPGRLAIATKNTDALKQGE 583          
BLAST of Gchil3207.t1 vs. uniprot
Match: R7QRD9_CHOCR (Retrotransposon protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRD9_CHOCR)

HSP 1 Score: 394 bits (1011), Expect = 5.540e-126
Identity = 177/295 (60.00%), Postives = 227/295 (76.95%), Query Frame = 0
Query:  707 RFCIDYRRLNEVTIKDVYPIPRMDEYIDSLGSATVFSTLDANSGYWQVPIREEDRDKTVFVCHQGLFRFRKMPFGLTNAPAKFQRAIDILLAPFKWRTCLVYLDDILVFSNNLDDHLKHVRDVMKILRDAGITLKLKKCEFFTDSVKYLGHIIRPGQLSIDEVRVKSLKEAKHPKTQTELRSFLGLCNVYRRFVPNFADIATPLNRLLTKGQPVELEPFGDAEASAFTALVNAVRSPPILALPSPGLPYEVDTDASANQVGCALFQSSEDGERHPIAYWSRSLNVHERNYSVSEK 1001
            RFC+DYRRLN +T+KD YP+P+M++ +DSLG A  F+TLD NSGYWQ+P+ E DR+KT F CH+G ++FR+MPFGL NAPA FQR +DILL+ ++W++CLVY DDI++FSN +++H  HV+ V+K+L+DAG++LKL+KC FF +SV YLGH+IRPG L++ E    ++K+A+   TQTELRSFLG+CNVYRRFVPNFA  A PLN LL KG+P +LE F   ++ AF  L  AV SPPIL LP   LP  VDTDA   QVGCALFQ+  DG RHP  +WSRSL   E NYSV E+
Sbjct:    5 RFCVDYRRLNAITVKDSYPLPKMEDCLDSLGDAKCFTTLDCNSGYWQIPVAEADREKTTFTCHEGCYQFRRMPFGLCNAPATFQRTLDILLSGYRWKSCLVYFDDIIIFSNFIEEHSTHVQQVLKVLQDAGLSLKLEKCNFFAESVDYLGHVIRPGLLAVAEKNTDAIKKAQERTTQTELRSFLGMCNVYRRFVPNFARTAAPLNVLLAKGKPFQLEKFSVEQSKAFGLLKTAVISPPILKLPRSNLPISVDTDACERQVGCALFQTYPDGTRHPAGFWSRSLIPAENNYSVGER 299          
BLAST of Gchil3207.t1 vs. uniprot
Match: UPI001E1E1407 (uncharacterized protein LOC123543642 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E1407)

HSP 1 Score: 410 bits (1054), Expect = 3.570e-123
Identity = 194/323 (60.06%), Postives = 238/323 (73.68%), Query Frame = 0
Query:  679 MLKAGVIEPVQSAWASPVVLVPKPDGSWRFCIDYRRLNEVTIKDVYPIPRMDEYIDSLGSATVFSTLDANSGYWQVPIREEDRDKTVFVCHQGLFRFRKMPFGLTNAPAKFQRAIDILLAPFKWRTCLVYLDDILVFSNNLDDHLKHVRDVMKILRDAGITLKLKKCEFFTDSVKYLGHIIRPGQLSIDEVRVKSLKEAKHPKTQTELRSFLGLCNVYRRFVPNFADIATPLNRLLTKGQPVELEPFGDAEASAFTALVNAVRSPPILALPSPGLPYEVDTDASANQVGCALFQSSEDGERHPIAYWSRSLNVHERNYSVSEK 1001
            ML+A VIEP  S WASP+VLV KPDGS RFC+DYRRLN +T++D YP+PRMDE IDSLG A +F+TLD NSGYWQ+P+R EDR+KT F  H+GL+ F +MPFGL NAPA FQR +DI L+   W+TCLVYLDDI+VFS    +H+ H+  V+  L  AG+TL LKKC FF ++V YLGH+IRPGQLS+ +    +LK  KHP TQTELRSFLGLCNVYRRFV  FA IA PLN LL KG+  +L P    + SAF  L +A+ +PPILALP       +DTDAS +Q+GC L Q+  DG + PI YWSR+L   E+NYS +EK
Sbjct:    1 MLQAKVIEPTTSEWASPIVLVAKPDGSTRFCVDYRRLNAITVRDSYPLPRMDECIDSLGDAKIFTTLDCNSGYWQIPVRPEDREKTTFTSHEGLYWFLRMPFGLRNAPATFQRFVDITLSGLTWKTCLVYLDDIIVFSKTPTEHMAHLDAVLHRLYRAGLTLNLKKCHFFKETVDYLGHVIRPGQLSVAKKNTAALKVTKHPTTQTELRSFLGLCNVYRRFVKGFAKIAAPLNLLLRKGETPQLGPLSAEQVSAFETLRDALLNPPILALPRTEGALTLDTDASDHQLGCCLLQTQPDGSQRPIGYWSRALTSAEKNYSTTEK 323          
BLAST of Gchil3207.t1 vs. uniprot
Match: UPI001E1D2C1D (uncharacterized protein LOC123544039 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D2C1D)

HSP 1 Score: 407 bits (1047), Expect = 3.550e-122
Identity = 251/689 (36.43%), Postives = 360/689 (52.25%), Query Frame = 0
Query:  318 SNQFMVRQISVLDTGAAPNLIHVELLPPLLRV-QVRTGPRLDIADANNNPLRTLGIISVMVRLGSYLVQ--LEFIVCKSLAAPVILGCDFCDRFVEAIRPRNRTVELEDGSTIPIVRKPLQGAARTRVPLPVAQKSVKKDPVSTRVKVAKAVAIPPETQVWVTVVTKQIVVHVVQPNPSLYTRRQLALSNGVVSVE-PDKPFKVLVANFGKTTQHLVKHQILGSVLPHPHAVVPTKISIAEVLGVADPKEGEDTAEIAKDGEHTTAAPHAEHFKPQEVTAPITGADQMDPVQELEKWDLNHVPASHREKLRHMLREFTPMWDGSLGTIGITEHRIDLIPNTRP-IAQHPYRAGPKAREEEKSQVEKMLKAGVIEPVQSAWASPVVLVPKPDGSWRFCIDYRRLNEVTIKDVYPIPRMDEYIDSLGSATVFSTLDANSGYWQVPIREEDRDKTVFVCHQGLFRFRKMPFGLTNAPAKFQRAIDILLAPFKWRTCLVYLDDILVFSNNLDDHLKHVRDVMKILRDAGITLKLKKCEFFTDSVKYLGHIIRPGQLSIDEVRVKSLKEAKHPKTQTELRSFLGLCNVYRRFVPNFADIATPLNRLLTKGQPVELEPFGDAEASAFTALVNAVRSPPILALPSPGLPYEVDTDASANQVGCALFQSSEDGERHPIAYWSRSLNVHERNYSVSEK 1001
            SN   V   + LDTGA   LI  + +P   R+ Q++  PRL    A    L  LG   + V +     +   EFIV   L  PV+ G  +   +V  I PR R V +            L+      VPL  + K        + ++V+    +PP T+  ++V T +  V +++  P         + NG++ +  P   F   VANF                        P  +   +V+GVA+       A++     H    P              + +D  D  + + +   +H+  +  EKL   LR    +WDG LG I   +H I   P T P +A  PYR GP +R+   +++++M +  VIEP +  WASPVVL+PKPDGS RFC+DYRRLN VT KD Y +PR+D+ +DSLG A  FSTLDANSGYWQ+ +   DRDKT F  H+GL+RF+++PFGL +APA FQRAID++L+  ++R  L YLDDI+VFS   + H++ +  V+ ++RDAG+TLKL KC F    V YLG+I+    L +D  ++ SL+ A  PKT+T +R FLG+C VYRRF+P +A I+  L R L    P   E   +A   A   L  ++ + PILALP P   Y ++ DASA+Q+G  L Q   D    P+ +WSR     E NYS +E+
Sbjct:  329 SNPKTVLTEACLDTGAGCVLIREDAVPKGTRIHQLQDNPRLT--TAKGETLSALGTCELFVNISGETSEKPTEFIVVSQLVVPVLFGTPWISDYVVRIEPRIREVHIA-----------LRPDRDLHVPLLASSKP-------SLIRVSSPWVLPPFTETLLSVHTDRSGVSLIRA-PRHRHDVTAQVKNGLIELPAPGSKFNCWVANFSSR---------------------PVALKSGQVVGVAE-------AQVVS---HVFTVP-----------TEASNSDTSDEWENIVRSQTSHLSENESEKLLTTLRPHASLWDGHLGNIDAVQHHI---PTTGPPLATQPYRVGPASRDSIDAELQRMKEMDVIEPAEGPWASPVVLIPKPDGSVRFCVDYRRLNAVTTKDSYALPRVDDSLDSLGGAQYFSTLDANSGYWQISVNPADRDKTTFTTHRGLYRFKRLPFGLVSAPATFQRAIDVILSTVRFRCALTYLDDIIVFSFTFEQHMRDLDLVLSLVRDAGVTLKLVKCRFAAPEVPYLGYIVGREGLRVDNSKISSLQAAVPPKTKTGIRRFLGMCGVYRRFIPGYAKISVALTRYLKDDIPDGFE-LDEAAVRAHAKLKESITTAPILALPRPQGLYVLEADASASQLGVQLLQQQPDQSLRPVGFWSRQCTAAECNYSPTER 950          
BLAST of Gchil3207.t1 vs. uniprot
Match: UPI001E1DB02D (uncharacterized protein LOC123543982 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DB02D)

HSP 1 Score: 385 bits (990), Expect = 2.500e-119
Identity = 221/528 (41.86%), Postives = 304/528 (57.58%), Query Frame = 0
Query:  299 DRVMVMAKRNYKVFADFGLSNQFMVRQISVLDTGAAPNLIHVELLPP-LLRVQVRTGPRLDIADANNNPLRTLGIISVMVRLGSYLVQLEFIVCKSLAAPVILGCDFCDRFVEAIRPRNRTVELEDGSTIPIVRK---PLQGAARTRVPLPVAQKSVKKDPVSTRVKVAKAVAIPPETQVWVTVVTKQIVVHVVQPNPSLYTRRQLALSNGVVSVEPDKPFKVLVANFGKTTQHLVKHQILGSVLPHPHAV--VPTKISIAEVLGVADP----KEGEDTAEIAKDGEHTTAAPHAEHFKPQEVTAPITGADQMDPVQELEKWDLNHVPASHREKLRHMLREFTPMWDGSLGTIGITEHRIDLIPNTRPIAQHPYRAGPKAREEEKSQVEKMLKAGVIEPVQSAWASPVVLVPKPDGSWRFCIDYRRLNEVTIKDVYPIPRMDEYIDSLGSATVFSTLDANSGYWQVPIREEDRDKTVFVCHQGLFRFRKMPFGLTNAPAKFQRAIDILLAPFKWRTCLVYLDDILVFS 816
            + V  +A RNYKV A  G+S   +    ++LDTGA PNLI   +LP    R ++   P   I  A    L   G I++ V+LG+  VQ  FIV   LAA  ILGC F DR V+AI P+ + V L +GS IPI+     P+ G   T           K+ P ST+V+V+K + +PP ++  V V      +  +Q          + ++NGV  + P++PF V V N    T+ L K  +LG  LPHP A+  +  +    E    ++P    +      +  K+G++     +     P     P+     ++     E   L H+    R K+  ML +   MW G LG +  T HRIDLIP  +P+   PYRAGP+AR  E +++++MLKA VIEP  S WASP+VLV KPDGS RFC+DYRRLN +T++D YP+PRMDE IDSLG A +F+TLD NSGYWQ+P+R+EDR+KT F  H+GL+ F +MPFGL NAPA FQR +DI L+   W++CLVYLDDI+VFS
Sbjct:   18 ELVCSLATRNYKVSATVGVSATVLRPVSAILDTGAGPNLIKETILPEDWERYRIPGPPAFHIVGAGGRRLLQKGNITLTVQLGTIKVQARFIVVDGLAAECILGCQFIDRQVQAIHPKEKRVTLANGSVIPIIHDSGPPVCGRPST---------PPKELPPSTKVRVSKMIVLPPRSECVVPVQCAAPGLRFLQARLR-DNATGVHMANGVAEIWPNQPFTVRVVNTSMKTRRLPKGMVLGHALPHPTAIGGLDRRHRCCERTSDSEPFACCRRNFTVGDQEKEGKNLPPMEYGLERDPP----PLPDRPDVEGDTWQEAVQLGHLQGEERAKILDMLAKHRSMWSGKLGQVQSTNHRIDLIPGQKPVHCQPYRAGPRARAVESAEIQRMLKAQVIEPATSEWASPIVLVAKPDGSTRFCVDYRRLNAITVRDSYPLPRMDECIDSLGDAKIFTTLDCNSGYWQIPVRQEDREKTTFTSHEGLYWFLRMPFGLRNAPATFQRFVDITLSGLTWKSCLVYLDDIIVFS 531          
BLAST of Gchil3207.t1 vs. uniprot
Match: R7QKK5_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKK5_CHOCR)

HSP 1 Score: 353 bits (907), Expect = 5.730e-105
Identity = 185/376 (49.20%), Postives = 224/376 (59.57%), Query Frame = 0
Query:  626 MLREFTPMWDGSLGTIGITEHRIDLIPNTRPIAQHPYRAGPKAREEEKSQVEKMLKAGVIEPVQSAWASPVVLVPKPDGSWRFCIDYRRLNEVTIKDVYPIPRMDEYIDSLGSATVFSTLDANSGYWQVPIREEDRDKTVFVCHQGLFRFRKMPFGLTNAPAKFQRAIDILLAPFKWRTCLVYLDDILVFSNNLDDHLKHVRDVMKILRDAGITLKLKKCEFFTDSVKYLGHIIRPGQLSIDEVRVKSLKEAKHPKTQTELRSFLGLCNVYRRFVPNFADIATPLNRLLTKGQPVELEPFGDAEASAFTALVNAVRSPPILALPSPGLPYEVDTDASANQVGCALFQSSEDGERHPIAYWSRSLNVHERNYSVSEK 1001
            ML EF  MW G LG I  T+HRI+L P  +PI Q PYRAGP ARE+EK ++++ML+AGVIEP  + WASPVV VPK DG+ RFC+DYR+LN VT++                                  I EEDRDKT F  H GL+RF +MPFGL NAPA FQRA+DI+L+  KW T LVYLDD++                               C FF  SV YLGH+IRPG+L ++   V +++ A+ P  QTELRSFLG+CNVYRRFV  FA IA PLN+   K Q  E E   DAE +AF  L   + SPPILALP  G  Y +DTDA  +QVGCAL Q   DG   PI YWSR+L   ERNY+ +EK
Sbjct:    3 MLSEFKDMWSGHLGKIDATKHRIELKPGAKPIYQAPYRAGPIAREKEKKEIDRMLRAGVIEPTSAKWASPVVFVPKKDGTMRFCVDYRKLNAVTVE----------------------------------IAEEDRDKTTFASHSGLYRFLRMPFGLKNAPATFQRAVDIILSRVKWETALVYLDDVI-------------------------------CAFFDTSVTYLGHVIRPGRLEVERRNVIAIERARAPTNQTELRSFLGMCNVYRRFVQGFAKIAAPLNKKTGKNQAYEFEILTDAEYAAFEELKRRLVSPPILALPRYGRKYTLDTDACGHQVGCALLQEQPDGGARPIGYWSRALTDAERNYTTTEK 313          
BLAST of Gchil3207.t1 vs. uniprot
Match: A0A2R5LEZ4_9ACAR (RNA-directed DNA polymerase (Fragment) n=1 Tax=Ornithodoros turicata TaxID=34597 RepID=A0A2R5LEZ4_9ACAR)

HSP 1 Score: 356 bits (914), Expect = 1.900e-102
Identity = 235/684 (34.36%), Postives = 355/684 (51.90%), Query Frame = 0
Query:  326 ISVLDTGAAPNLIHVELLPPLLRVQVRTGPRLDIADANNNPLRTLGIISVMVRLGSYLVQLEFIVCKSLAAPVILGCDFCDRFVEAIRPRNRTVELEDGSTIPI---VRKPLQGAARTRVPLPVAQKSVKKDPVSTRVKVAKAVAIPPETQVWVTVVTKQIVVH--VVQPNPSLYTRRQLALSNGVVSVEPDKPFKVLVANFGKTTQHLVKHQILGSVLPHPHAVVPTKISIAEVLGVADPKEGEDTAEIAKDGEHTTAAPHAEHFKPQEVTAPITGADQMDPVQELEKWDLN-HVPASHREKLRHMLREFTPMWDGS--LGTIGITEHRIDLIPNTRPIAQHPYRAGPKAREEEKSQVEKMLKAGVIEPVQSAWASPVVLVPKPDGSWRFCIDYRRLNEVTIKDVYPIPRMDEYIDSLGSATVFSTLDANSGYWQVPIREEDRDKTVFVCHQGLFRFRKMPFGLTNAPAKFQRAIDILLAPFKWRTCLVYLDDILVFSNNLDDHLKHVRDVMKILRDAGITLKLKKCEFFTDSVKYLGHIIRPGQLSIDEVRVKSLKEAKHPKTQTELRSFLGLCNVYRRFVPNFADIATPLNRLLTKGQPVELEPFGDAEASAFTALVNAVRSPPILALPSPGLPYEVDTDASANQVGCALFQSSEDGERHPIAYWSRSLNVHERNYSVSEK 1001
            I+++DTGA  ++I   L   L +VQ +     +I  A  + +   G  + ++++      + F V  +    VILG DF       I   N  +  +   T       R   +  A T V     Q                 V +PP + V VT   ++      + + N  L   R + ++ G+V V  +  F++LV NF    QHL      G+ +    AV+  + S  +V  +       DTA IA   EH      AEHF                        D+N  +  + ++ L  ML +F+  +  S  +    I +HRI +    RPI + PYR   K RE  ++QVE+ML+  +I+P  S WASPVVLV K DG+ RFC+DYR+LNE+T KDVYP+PR+D+ +D L +A  FS++D  +GYWQ+ + E DR+KT FV   GL+ F+ MPFGL  APA FQR +D +LA  KW+TCLVYLDD++VF+   ++H++ ++ V++ +R AG+TLK +KC F  + +++LGH++    +  D  +  ++   + P    ++RSFLGLC  YRRF+PNF+ IA+PLN L   G       + +A+  AF  L   +++ P+LA   P    E+ TDAS + +G  L Q   DG    IAY SR+L   E+NYS +EK
Sbjct:    9 IALIDTGADDSVISGRLAKKLRKVQTKWDEP-NIGTAGGHVVTPTGRCTAVIQVRDIQYVVSFAVLPNCPRDVILGMDFLVENEAIIDFTNGVISFKTPETAEDKWWARITPEKRANTDVTAVTTQH----------------VNLPPLSSVLVTATCERAPTGCLLAEGNTQLLLERGIGIARGIVPVR-NGIFELLVTNFRPEPQHLAN----GTKI----AVIVDQYSTTDVCLM-------DTARIAVTTEH-----EAEHF------------------------DVNPQLNTTQKQTLLQMLNDFSDCFAASSKVRQTPIAKHRIIVDEKARPIHRMPYRVSCKERETIRTQVEEMLRDDIIQPSTSPWASPVVLVKKKDGTLRFCVDYRKLNEITKKDVYPLPRIDDTLDRLQNAKFFSSMDLKTGYWQIEVDERDREKTAFVTPDGLYEFKVMPFGLCTAPATFQRVMDTVLAGLKWQTCLVYLDDVVVFARTFEEHVERLKQVLEAIRTAGLTLKPQKCRFGYEELRFLGHLVSSDGVRPDPEKTAAIANYRVPSNVKDVRSFLGLCAYYRRFIPNFSRIASPLNALTKDGSTFI---WSEAQQQAFDELKTRLQTAPVLAHFDPNAETEIHTDASNDGLGVVLVQL-HDGVERVIAYASRTLTKAEKNYSTTEK 626          
BLAST of Gchil3207.t1 vs. uniprot
Match: A0A6B0VG70_IXORI (Putative retrotransposable element (Fragment) n=1 Tax=Ixodes ricinus TaxID=34613 RepID=A0A6B0VG70_IXORI)

HSP 1 Score: 347 bits (890), Expect = 6.680e-102
Identity = 227/680 (33.38%), Postives = 352/680 (51.76%), Query Frame = 0
Query:  327 SVLDTGAAPNLIHVELLPPLLRVQVR-TGPRLDIADANNNPLRTLGIISVMVRLGSYLVQLEFIVCKSLAAPVILGCDFCDRFVEAIRPRNRTVELEDGSTIPIVRKPLQGAARTRVPLPVAQKSVKKDPVSTRVKVAKAVAIPPETQVWVTVVTKQIVVH--VVQPNPSLYTRRQLALSNGVVSVEPDKPFKVLVANFGKTTQHLVKHQILGSVLPHPHAVVPTKISIAEVLGVADPKEGEDTAEIAKDGEHTTAAPHAEHFKPQEVTAPITGADQMDPVQELEKWDLNHVPASHREKLRHMLREFTPMWDGS--LGTIGITEHRIDLIPNTRPIAQHPYRAGPKAREEEKSQVEKMLKAGVIEPVQSAWASPVVLVPKPDGSWRFCIDYRRLNEVTIKDVYPIPRMDEYIDSLGSATVFSTLDANSGYWQVPIREEDRDKTVFVCHQGLFRFRKMPFGLTNAPAKFQRAIDILLAPFKWRTCLVYLDDILVFSNNLDDHLKHVRDVMKILRDAGITLKLKKCEFFTDSVKYLGHIIRPGQLSIDEVRVKSLKEAKHPKTQTELRSFLGLCNVYRRFVPNFADIATPLNRLLTKGQPVELEPFGDAEASAFTALVNAVRSPPILALPSPGLPYEVDTDASANQVGCALFQSSEDGERHPIAYWSRSLNVHERNYSVSEK 1001
            +++DTGA  +++   L   L +V     GP+  I  A  + ++ +G  +  V++ S    ++F++ +  A  VILG +F   +   I      + L   + +P   KP + +A  RV                    A  V +PP + V V VVT        V++ N  L   R + ++ GV  ++  +   VLV NF   TQHL K   +G V                       +E  ++ EIA   E ++         PQ+ T P     Q+D   +L        P   R +L +++ E++  +  S  +    + +HRI    +  P+ + PYR   K RE  + QVE+ML   +I+P  S WASPVVLV K DG+ RFC+DYR+LN VT KDVYP+PR+D+ +D L ++  FS++D  SGYWQ+ + E DR+KT FV   GL+ F+ MPFGL  AP  FQR +D +L   KW++CL+Y+DD+ VFS + D+HL+ +R V++ ++ AG+TLK  KC +  D +K+LGH++    +  D  + +++     P+ +  +R FLGLC  YRRFV +FA I+ PL  L    +  E   + + +  AF  L   +++PP+L         E+ TDAS   +G  L Q  +  ER  IAY SR+L+  E+NYS +EK
Sbjct:   85 ALVDTGADYSVMSGRLSRRLQKVTTPWEGPQ--IRTAGGHLIKPVGRCTARVKIHSETCPVKFVILQDCARDVILGMNFLREYAAVIDMGENRLTLR--TPVPPSEKPQRASAAARV-------------------AADHVNLPPRSSVVVPVVTDAATCGEVVLKGNLQLLLGRGIGVARGVAELQHGRTV-VLVTNFRNETQHLTKGAAVGHV-----------------------EELRNSVEIAAIAEESSP--------PQQDTTPPA---QLDIDAKL--------PGPKRRQLSNLIAEYSDCFATSSKVRQTTVAKHRIVTEDDVLPVHRSPYRVSVKEREVIQQQVEEMLNDDIIQPSSSPWASPVVLVRKKDGTLRFCVDYRQLNAVTKKDVYPLPRIDDTLDRLRNSQYFSSMDLKSGYWQIEVDERDREKTAFVTPDGLYEFKVMPFGLCTAPTTFQRVMDTILTGLKWQSCLIYIDDVAVFSGDFDEHLRRLRAVLQAIQTAGLTLKPSKCRYAYDELKFLGHVVSNEGVHPDPEKTRAVAAFPAPRDKKAVRRFLGLCAYYRRFVRDFARISAPLTNLTKDAEKFE---WAEEQQQAFDELKRRLQTPPVLGHFDQDAETEIHTDASNAGLGAVLVQVQQGTER-VIAYASRTLSKAEKNYSTTEK 694          
BLAST of Gchil3207.t1 vs. uniprot
Match: A0A147BST7_IXORI (RNA-directed DNA polymerase (Fragment) n=2 Tax=Ixodes ricinus TaxID=34613 RepID=A0A147BST7_IXORI)

HSP 1 Score: 351 bits (901), Expect = 1.190e-100
Identity = 241/681 (35.39%), Postives = 360/681 (52.86%), Query Frame = 0
Query:  327 SVLDTGAAPNLIHVELLPPLLRVQVR-TGPRLDIADANNNPLRTLGIISVMVRLGSYLVQLEFIVCKSLAAPVILGCDFCDRFVEAIRPRNRTVELEDGSTIPIVRKPLQGAARTRVPLPVAQKSVKKDPVSTRVKV-AKAVAIPPETQVWVTVVTKQIVVH--VVQPNPSLYTRRQLALSNGVVSVEPDKPFKVLVANFGKTTQHLVKHQILGSVLPHPHAVVPTKISIAEVLGVADPKEGEDTAEIAKDGEHTTAAPHAEHFKPQEVTAPITGADQMDPVQELEKWDLNHVPASHREKLRHMLREFTPMWDGS--LGTIGITEHRIDLIPNTRPIAQHPYRAGPKAREEEKSQVEKMLKAGVIEPVQSAWASPVVLVPKPDGSWRFCIDYRRLNEVTIKDVYPIPRMDEYIDSLGSATVFSTLDANSGYWQVPIREEDRDKTVFVCHQGLFRFRKMPFGLTNAPAKFQRAIDILLAPFKWRTCLVYLDDILVFSNNLDDHLKHVRDVMKILRDAGITLKLKKCEFFTDSVKYLGHIIRPGQLSIDEVRVKSLKEAKHPKTQTELRSFLGLCNVYRRFVPNFADIATPLNRLLTKGQPVELEPFGDAEASAFTALVNAVRSPPILALPSPGLPYEVDTDASANQVGCALFQSSEDGERHPIAYWSRSLNVHERNYSVSEK 1001
            +++DTGA  +++   L   L +V     GP+  I  A  + +  +G  +  V +      ++F+V +  +  VILG DF   +          ++L  G+    +RKP         P P   K+      S+ V+V A  V +PP + V+V V   +      +++ +  L   R + ++ GV  ++ D     LV NF +  QHL K   +G      HA                 +E  D+A IA   E  ++ P          T P +  D +DP           +P   R KL  +L EFT  +  S  +    + +HRI    N  P+ + PYR   K RE  + QV++ML   +++P  S WASPVVLV K DG+ RFC+DYRRLN VT KDVYP+PR+D+ +D L  A  FS++D  SGYWQ+ + E DR+KT FV   GL+ F+ MPFGL  APA FQR +D +L+  KW++CLVYLDD++VF+++ D+HL+ +R V++ +R+AG++LK  KC F    +K+LGH++    +S D  +  ++ E   P  +  +R FLGLC  YRRFV +FA I+ PL  L TK   V  + +G+ +  AF  L   ++SPPIL    P +  EV TDAS   +G  L Q  +DG    IAY SR+L+  E+NYS ++K
Sbjct:   10 ALVDTGADYSVLSGRLSRRLRKVTTPWDGPQ--IRTAGGHLITPVGRCTARVEIHGETCPVKFVVLQDCSRDVILGMDFLCEY-------GAVIDL--GANRLTLRKP--------APPPEEPKAT-----SSAVRVLANHVNLPPRSSVFVPVGVDETFCGDVLLEGSLQLLLGRGIGIARGVAELQ-DGHAVALVTNFRQEAQHLTKGTAVG------HA-----------------EELPDSAAIAGISEDLSSWPPK--------TTPPSQFD-IDPT----------LPTPQRRKLNDLLAEFTECFSTSSKVRQTTVAKHRIVTEDNALPVHRSPYRVSVKEREVIQKQVQEMLDDDIVQPSSSPWASPVVLVKKKDGTLRFCVDYRRLNAVTKKDVYPLPRIDDTLDRLRHARYFSSMDLKSGYWQIEVDERDREKTAFVTPDGLYEFKVMPFGLCTAPATFQRVMDTVLSGLKWQSCLVYLDDVVVFASDFDEHLRRLRAVLQAVRNAGLSLKPSKCRFAYGELKFLGHVVSAQGVSPDPAKTSAVAEFPKPSDKKAVRRFLGLCAYYRRFVRDFAKISAPLTHL-TKDD-VNFQ-WGEEQEQAFNELKERLQSPPILGHFDPSVETEVHTDASNAGLGAVLVQR-QDGAERVIAYASRALSKAEKNYSTTDK 619          
BLAST of Gchil3207.t1 vs. uniprot
Match: A0A4D5S0C5_IXOSC (RNA-directed DNA polymerase (Fragment) n=4 Tax=Ixodes TaxID=6944 RepID=A0A4D5S0C5_IXOSC)

HSP 1 Score: 352 bits (903), Expect = 1.860e-100
Identity = 236/680 (34.71%), Postives = 349/680 (51.32%), Query Frame = 0
Query:  327 SVLDTGAAPNLIHVELLPPLLRVQVR-TGPRLDIADANNNPLRTLGIISVMVRLGSYLVQLEFIVCKSLAAPVILGCDFCDRFVEAIRPRNRTVELEDGSTIPIVRKPLQGAARTRVPLPVAQKSVKKDPVSTRVKVAKAVAIPPETQVWVTVVTKQIVVHVV--QPNPSLYTRRQLALSNGVVSVEPDKPFKVLVANFGKTTQHLVKHQILGSVLPHPHAVVPTKISIAEVLGVADPKEGEDTAEIAKDGEHTTAAPHAEHFKPQEVTAPITGADQMDPVQELEKWDLNHVPASHREKLRHMLREFTPMWDGS--LGTIGITEHRIDLIPNTRPIAQHPYRAGPKAREEEKSQVEKMLKAGVIEPVQSAWASPVVLVPKPDGSWRFCIDYRRLNEVTIKDVYPIPRMDEYIDSLGSATVFSTLDANSGYWQVPIREEDRDKTVFVCHQGLFRFRKMPFGLTNAPAKFQRAIDILLAPFKWRTCLVYLDDILVFSNNLDDHLKHVRDVMKILRDAGITLKLKKCEFFTDSVKYLGHIIRPGQLSIDEVRVKSLKEAKHPKTQTELRSFLGLCNVYRRFVPNFADIATPLNRLLTKGQPVELEPFGDAEASAFTALVNAVRSPPILALPSPGLPYEVDTDASANQVGCALFQSSEDGERHPIAYWSRSLNVHERNYSVSEK 1001
            +++DTGA  +++   L   L +V     GP+  I  A  + +  +G  +  V +      ++F++ +  +  VILG DF   +   I      + L     +P   KP   +A  RVP                   A  V +PP + V V V T +     V  + N  L   R + ++ GV  ++ D    VLV NF   TQHL K   +G V                       +E +++AEIA        A   E   PQ+ +A     D +DP           +P   R +L ++L E+   +  S  +    + +HRI    + RP+ + PYR   K RE  + QV++ML   +I+P  S WASPVVLV K DG+ RFC+DYR+LN VT KDVYP+PR+D+ +D L  +  FS++D  SGYWQ+ + E DR+KT FV   GL+ F+ MPFGL  APA FQR +D +LA  KW++CLVYLDD++VFS + D+HL+ +R V++ ++ AG+TLK  KC F  D +K+LGH++    +  D  + +++     P+ +  +R FLGLC  YRRFV +FA I+ PL  L    +  E   + + +  AF  L   +++PP+L         E+ TDAS   +G  L Q  E  ER  IAY SR+L   ERNYS +EK
Sbjct:   85 ALVDTGADYSVLSGRLSRHLRKVTTPWDGPQ--IRTAGGHLITPIGRCTARVEIHGETCPVKFVILQDCSRDVILGMDFLCEYGAVIDLGENRLTLR--KPVPPPEKPKTTSAAVRVP-------------------ANHVNLPPRSSVVVPVGTNEDTRSEVLLEGNLQLLLGRGIGVARGVAELQ-DGRTAVLVTNFRNETQHLTKGAAVGHV-----------------------EELQNSAEIA--------AITDESSPPQQDSASPAQLD-IDP----------KLPDPKRRQLINLLAEYRDCFATSSKMRQTAVAKHRIVTEDDARPVHRSPYRVSAKEREVIQQQVQEMLNDDIIQPSSSPWASPVVLVKKKDGTLRFCVDYRQLNTVTKKDVYPLPRIDDTLDRLRHSRYFSSMDLKSGYWQIEVDERDREKTAFVTPDGLYEFKVMPFGLCTAPATFQRVMDTVLAGLKWQSCLVYLDDVVVFSTDFDEHLRRLRTVLQAIQTAGLTLKPSKCRFAYDELKFLGHVVSNEGIHPDPEKTRAVAAFPAPRDKKAVRRFLGLCAYYRRFVRDFARISAPLTNLTKDAEKFE---WAEKQQQAFDELKRRLQTPPVLGHFDQDAETEIHTDASNAGLGAVLVQVQEGTER-VIAYASRTLTKAERNYSTTEK 694          
The following BLAST results are available for this feature:
BLAST of Gchil3207.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001E1D3E383.320e-15243.13uncharacterized protein LOC123544752 n=1 Tax=Merce... [more]
R7QRD9_CHOCR5.540e-12660.00Retrotransposon protein n=1 Tax=Chondrus crispus T... [more]
UPI001E1E14073.570e-12360.06uncharacterized protein LOC123543642 n=1 Tax=Merce... [more]
UPI001E1D2C1D3.550e-12236.43uncharacterized protein LOC123544039 n=1 Tax=Merce... [more]
UPI001E1DB02D2.500e-11941.86uncharacterized protein LOC123543982 n=1 Tax=Merce... [more]
R7QKK5_CHOCR5.730e-10549.20Integrase catalytic domain-containing protein n=1 ... [more]
A0A2R5LEZ4_9ACAR1.900e-10234.36RNA-directed DNA polymerase (Fragment) n=1 Tax=Orn... [more]
A0A6B0VG70_IXORI6.680e-10233.38Putative retrotransposable element (Fragment) n=1 ... [more]
A0A147BST7_IXORI1.190e-10035.39RNA-directed DNA polymerase (Fragment) n=2 Tax=Ixo... [more]
A0A4D5S0C5_IXOSC1.860e-10034.71RNA-directed DNA polymerase (Fragment) n=4 Tax=Ixo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 869..965
e-value: 1.2E-19
score: 72.1
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 724..859
e-value: 1.5E-88
score: 297.6
NoneNo IPR availableGENE3D3.10.10.10HIV Type 1 Reverse Transcriptase, subunit A, domain 1coord: 645..784
e-value: 1.5E-88
score: 297.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 563..583
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 563..603
NoneNo IPR availablePANTHERPTHR24559:SF324TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEINcoord: 656..998
NoneNo IPR availablePANTHERPTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINcoord: 656..998
NoneNo IPR availableCDDcd00303retropepsin_likecoord: 329..405
e-value: 4.99072E-9
score: 52.3388
NoneNo IPR availableCDDcd01647RT_LTRcoord: 683..859
e-value: 3.72934E-91
score: 286.029
IPR021109Aspartic peptidase domain superfamilyGENE3D2.40.70.10Acid Proteasescoord: 323..432
e-value: 1.5E-6
score: 30.1
IPR041577Reverse transcriptase/retrotransposon-derived protein, RNase H-like domainPFAMPF17919RT_RNaseH_2coord: 926..1001
e-value: 6.4E-19
score: 67.9
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 699..859
e-value: 1.4E-31
score: 109.8
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 680..859
score: 15.947772
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 629..1001

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004382_piloncontigtig00004382_pilon:903009..906112 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3207.t1Gchil3207.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004382_pilon 903009..906112 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil3207.t1 ID=Gchil3207.t1|Name=Gchil3207.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=1002bp
METETVYSTRLNKAFHRCGNVFPAYERCTMFVDGLDPSIRALVARHREEK
RKLTYLELVQYAQAEGDTLHVRQNRKSRPTRALLSEGSNSSFSLAGGPAP
VGVNDNIHFIGSNPESMGTSELPSTSAPTTDEDRALYTQGRRVPAASLPF
ANTAARFSCPGWRDTAPRRVDSRPQPNPAELFFYLCYLRGHKAPDCTFPL
REGSRIIAQYEALTPEEKAQVPSSCTEFGGVRFEKLNLGVSPAGGASSKP
ELKTPEALQLRSPAVTILSRKTADTDVNSGYFSVLRRPWIRSRNLRIPDR
VMVMAKRNYKVFADFGLSNQFMVRQISVLDTGAAPNLIHVELLPPLLRVQ
VRTGPRLDIADANNNPLRTLGIISVMVRLGSYLVQLEFIVCKSLAAPVIL
GCDFCDRFVEAIRPRNRTVELEDGSTIPIVRKPLQGAARTRVPLPVAQKS
VKKDPVSTRVKVAKAVAIPPETQVWVTVVTKQIVVHVVQPNPSLYTRRQL
ALSNGVVSVEPDKPFKVLVANFGKTTQHLVKHQILGSVLPHPHAVVPTKI
SIAEVLGVADPKEGEDTAEIAKDGEHTTAAPHAEHFKPQEVTAPITGADQ
MDPVQELEKWDLNHVPASHREKLRHMLREFTPMWDGSLGTIGITEHRIDL
IPNTRPIAQHPYRAGPKAREEEKSQVEKMLKAGVIEPVQSAWASPVVLVP
KPDGSWRFCIDYRRLNEVTIKDVYPIPRMDEYIDSLGSATVFSTLDANSG
YWQVPIREEDRDKTVFVCHQGLFRFRKMPFGLTNAPAKFQRAIDILLAPF
KWRTCLVYLDDILVFSNNLDDHLKHVRDVMKILRDAGITLKLKKCEFFTD
SVKYLGHIIRPGQLSIDEVRVKSLKEAKHPKTQTELRSFLGLCNVYRRFV
PNFADIATPLNRLLTKGQPVELEPFGDAEASAFTALVNAVRSPPILALPS
PGLPYEVDTDASANQVGCALFQSSEDGERHPIAYWSRSLNVHERNYSVSE
K*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043128Rev_trsase/Diguanyl_cyclase
IPR021109Peptidase_aspartic_dom_sf
IPR041577RT_RNaseH_2
IPR000477RT_dom
IPR043502DNA/RNA_pol_sf