Gchil3196.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil3196.t1
Unique NameGchil3196.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length386
Homology
BLAST of Gchil3196.t1 vs. uniprot
Match: A0A2V3IU59_9FLOR (Protein hedgehog n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IU59_9FLOR)

HSP 1 Score: 240 bits (612), Expect = 3.870e-68
Identity = 150/358 (41.90%), Postives = 201/358 (56.15%), Query Frame = 0
Query:   80 GSPTPSIYPDSSKAPKIVDFASTGGRP----------------------EQSTTKGKEGNPLLEQGIILRGTHSPTAEPSKANPHLV----------------------------FGHIPSASILPSFEVSTPSVQESPVALSDPQMSKSDASQSAIPSSENSSTPSPSTSEAPQ--NDGSSCFPAGALTVGGNGNLIRVEDLRVGNRVMVADGILSPVIDFSHAEKAIVFPFSQFITEGGKSLTVTSSHYIYTQRGLLPARDVSASDFLTLSNGTLALVTAKIQIFDRGLFNPHTSHGDIIIDGFKVSSYTSAIEPRIAHALMAPIRLLDMLGSRPSLLSFFVRNPLVMRYFNIRSS 385
            G+P  SIYPD+SKAPK+VDFA     P                      +Q    G +  P     I+L  T SP+A+P+K  P  V                            FG +P     P     TPS    P+  S    S      + + + + SSTPSP +    +  NDGS+CFPA A     +G  + +EDL VG+ V V  G  S +IDFSHA++ ++  F +F TE G+ LTVT SHYI+T+RGLLPA+ V+A+DFL L++G    VTAK ++ +RGLFNPHT+ GDI++DGF VS+YTSA++P  AHALMAPIRLLD  G RP++L+  V+NP ++RYFNIRSS
Sbjct:  525 GTPRASIYPDASKAPKVVDFAPGASPPPTKQPSSGLLDMFTNPSKTPKEDQQIDLGMKPKPSKNHSILLHPTPSPSAKPAKGIPISVIEHSXXXXXXXXXXXXXXXXXXXXXXXPFGKLPLILTNPG---KTPSPSGRPMKESGIFPSP----MAVVGNPKESSTPSPQSPRPAEEDNDGSACFPASASVTQIDGQRMAMEDLTVGDYVFVGYGQYSRIIDFSHADRNVITSFDRFFTESGQILTVTPSHYIHTRRGLLPAKLVTANDFLVLADGGYVSVTAKDRVVERGLFNPHTTQGDIVVDGFLVSTYTSAVKPVSAHALMAPIRLLDTFGIRPTVLNSLVQNPRMIRYFNIRSS 875          
BLAST of Gchil3196.t1 vs. uniprot
Match: A0A2V3J669_9FLOR (Indian hedgehog B protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J669_9FLOR)

HSP 1 Score: 134 bits (337), Expect = 1.360e-31
Identity = 62/146 (42.47%), Postives = 95/146 (65.07%), Query Frame = 0
Query:  210 CFPAGALTVGGNGNLIRVEDLRVGNRVMVADGILSPVIDFSHAEKAIVFPFSQFITEGGKSLTVTSSHYIYTQRGLLPARDVSASDFLTLSNGTLALVTAKIQIFDRGLFNPHTSHGDIIIDGFKVSSYTSAIEPRIAHALMAPIR 355
            CFP  A+    NG+ I + D+R+G+RV+VA    S V  F+H    ++  F Q  TE G+ L++T+SHYIY    L+PA+  +    + LS+G ++ +TA   + D GL+NP T HGDI++D  +VSSYT A++P IAH+++AP+R
Sbjct:  281 CFPGSAMVQLENGHRIPMSDVRIGHRVLVAPETFSTVFMFTHRVDNVLSEFIQIRTETGEILSLTASHYIYLDSSLVPAKYATTGQQVQLSDGRVSFITAVSTVRDSGLYNPQTLHGDIVVDNIRVSSYTDAVKPHIAHSMLAPLR 426          
BLAST of Gchil3196.t1 vs. uniprot
Match: R7Q619_CHOCR (HintN domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q619_CHOCR)

HSP 1 Score: 122 bits (307), Expect = 4.200e-29
Identity = 65/163 (39.88%), Postives = 96/163 (58.90%), Query Frame = 0
Query:  194 TPSPSTS-EAPQNDGSSCFPAGALTVGGNGNLIRVEDLRVGNRVMVADGILSPVIDFSHAEKAIVFPFSQFITEGGKSLTVTSSHYIYTQRGLLPARDVSASDFLTLSNGTLALVTAKIQIFDRGLFNPHTSHGDIIIDGFKVSSYTSAIEPRIAHALMAPIR 355
            +PSPS   E   +D S CFPA AL    NG    +  +++G+RV V     S V  F+H   AI + F    T+ G +L++T  HY+Y    +  A+ V + DF+TL++GT + VT       RGL+NP T HGDII++G   ++YT+ +E  +AHAL+AP+R
Sbjct:   52 SPSPSLDDEGEDDDDSVCFPANALVELENGATKMMSQVQLGDRVRVGPNDFSDVFMFTHKTAAIKYSFVTLATQSGHTLSLTKGHYLYVNGVVAAAKTVRSGDFITLADGTTSSVTQVGTEIARGLYNPQTVHGDIIVNGLLATTYTTTVERSMAHALLAPLR 214          
BLAST of Gchil3196.t1 vs. uniprot
Match: A0A2V3IX71_9FLOR (Indian hedgehog B protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX71_9FLOR)

HSP 1 Score: 124 bits (312), Expect = 5.380e-28
Identity = 65/167 (38.92%), Postives = 100/167 (59.88%), Query Frame = 0
Query:  189 SENSSTPSPSTSEAPQNDGSSCFPAGALTVGGNGNLIRVEDLRVGNRVMVADGILSPVIDFSHAEKAIVFPFSQFITEGGKSLTVTSSHYIYTQRGLLPARDVSASDFLTLSNGTLALVTAKIQIFDRGLFNPHTSHGDIIIDGFKVSSYTSAIEPRIAHALMAPIR 355
            S ++++PSP       +D + CFPA A     +G+  ++ D+++G+RVMV  GI SPV  F+H    + + F    T  G +L++T  HY+Y    L  A  V   D L L++ +L  VT    +   GLFNP T HGDI+++G K S+YT+A+EP +AHAL++P+R
Sbjct:  294 STDAASPSPD-----DDDDAVCFPADATVQLEDGSAKKMGDVQLGDRVMVDHGIFSPVFMFTHKLSTVRYGFVNIQTSSGNTLSLTPGHYLYVNGHLSAASTVKNGDTLMLADSSLTDVTQVSTVTSTGLFNPQTLHGDIVVNGLKASTYTTAVEPGLAHALLSPLR 455          
BLAST of Gchil3196.t1 vs. uniprot
Match: A0A2V3J2J0_9FLOR (Temptin n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2J0_9FLOR)

HSP 1 Score: 122 bits (307), Expect = 7.330e-28
Identity = 59/146 (40.41%), Postives = 93/146 (63.70%), Query Frame = 0
Query:  210 CFPAGALTVGGNGNLIRVEDLRVGNRVMVADGILSPVIDFSHAEKAIVFPFSQFITEGGKSLTVTSSHYIYTQRGLLPARDVSASDFLTLSNGTLALVTAKIQIFDRGLFNPHTSHGDIIIDGFKVSSYTSAIEPRIAHALMAPIR 355
            CFPA A     +G++ R++ L++G+RV V +GI SP+  F+H    I +PF    T+   SLT+TS H++Y     + A  V   D++ L +G+ +LVTA  +    GL+NP T HGD+I++G +V++YTSAI   +AH+L+ P+R
Sbjct:  214 CFPAHAQVRLEDGSVRRMDQLQIGDRVHVGNGIYSPIFMFTHQHARIRYPFVIIQTDKQHSLTLTSGHFMYANDASVRASAVRVGDYVQLEDGSKSLVTAVSKHISNGLYNPQTLHGDLIVNGVRVTTYTSAIHLTLAHSLLTPLR 359          
BLAST of Gchil3196.t1 vs. uniprot
Match: UPI001E1DDBBD (warthog protein 6-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DDBBD)

HSP 1 Score: 119 bits (299), Expect = 2.390e-27
Identity = 63/164 (38.41%), Postives = 94/164 (57.32%), Query Frame = 0
Query:  192 SSTPSPSTSEAPQNDGSSCFPAGALTVGGNGNLIRVEDLRVGNRVMVADGILSPVIDFSHAEKAIVFPFSQFITEGGKSLTVTSSHYIYTQRGLLPARDVSASDFLTLSNGTLALVTAKIQIFDRGLFNPHTSHGDIIIDGFKVSSYTSAIEPRIAHALMAPIR 355
            SS+PSPS       +GSSCFP  A+    +G   R++ +++G+RV V     S V  F+H     ++ F +  T  G S+++T  HYI+   GL  A  V+  D L L  G    VT    +  +G++NP T HGDI++ G +VS+YT+A+EPR+AHA +  IR
Sbjct:  119 SSSPSPSAV-----NGSSCFPGSAMVELESGARQRMDKMKIGDRVKVGRAEFSEVFMFTHKTHTGIYDFVKITTSSGHSVSLTGGHYIHVNGGLAAASVVAVGDMLQLGTGEATEVTDVTCVQSKGIYNPQTLHGDIVVGGIRVSTYTTAVEPRLAHAGLGAIR 277          
BLAST of Gchil3196.t1 vs. uniprot
Match: A0A1X6PD14_PORUM (Hint domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PD14_PORUM)

HSP 1 Score: 122 bits (307), Expect = 4.770e-27
Identity = 62/154 (40.26%), Postives = 92/154 (59.74%), Query Frame = 0
Query:  202 APQNDGSSCFPAGALTVGGNGNLIRVEDLRVGNRVMVADGILSPVIDFSHAEKAIVFPFSQFITEGGKSLTVTSSHYIYTQRGLLPARDVSASDFLTLSNGTLALVTAKIQIFDRGLFNPHTSHGDIIIDGFKVSSYTSAIEPRIAHALMAPIR 355
            +P ++ S+CFPA A     +G  + V+ L  G+ V V     S V  FSH       PF +  T  G +LT+++ HY+Y   GL  A  V+  D L  ++G    V+A   +   GL+ PHT HGD+++DGF+VS+YT+A+EPR+AHAL+AP+R
Sbjct:  377 SPSDEDSACFPASAALTLADGTAVGVDILATGHTVRVGKAAHSEVFLFSHKVAGGDHPFLRLTTAAG-ALTLSAGHYVYANGGLKAAAAVAVGDTLETADGATVPVSAITAVRASGLYAPHTLHGDVVVDGFRVSTYTTAVEPRLAHALLAPVR 529          
BLAST of Gchil3196.t1 vs. uniprot
Match: A0A2V3III2_9FLOR (Protein hedgehog n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3III2_9FLOR)

HSP 1 Score: 119 bits (299), Expect = 5.480e-26
Identity = 64/155 (41.29%), Postives = 98/155 (63.23%), Query Frame = 0
Query:  204 QNDGSSCFPAGALTVGGNGNLIRVEDLRVGNRVMVADGILSPVIDFSHAEKAIVFPFSQFITEGGKSLTVTSSHYIYTQRG-LLPARDVSASDFLTLSNGTLALVTAKIQ-IFDRGLFNPHTSHGDIIIDGFKVSSYTSAIEPRIAH-ALMAPIR 355
            ++DGS+CFPA A      G  + ++DL++G+RV  A+G  S VI F+H  ++ +  F +  T+ G+ LTVT  HY+Y Q G L  A  VS SD L ++N +      KI+ +   GL+NP T  G I+++GF  S+YT+A+EP++AH AL+ P+R
Sbjct:  368 EDDGSACFPASARVYSSRGT-VPMQDLKIGDRVKTANGY-SDVIMFTHRSRSTIHTFVKLHTQSGRELTVTGGHYVYKQNGDLAAAATVSVSDVLRMANASEDGTIMKIEKVSGIGLYNPQTESGSIVVNGFITSTYTTAVEPKLAHMALLMPVR 520          
BLAST of Gchil3196.t1 vs. uniprot
Match: A0A2V3IFE3_9FLOR (Protein hedgehog n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFE3_9FLOR)

HSP 1 Score: 111 bits (278), Expect = 5.300e-25
Identity = 54/147 (36.73%), Postives = 85/147 (57.82%), Query Frame = 0
Query:  209 SCFPAGALTVGGNGNLIRVEDLRVGNRVMVADGILSPVIDFSHAEKAIVFPFSQFITEGGKSLTVTSSHYIYTQRGLLPARDVSASDFLTLSNGTLALVTAKIQIFDRGLFNPHTSHGDIIIDGFKVSSYTSAIEPRIAHALMAPIR 355
            SCFP  A     N   + + +LR G+RV+ A+G  S V  FSH  +  + PF +  T   K +T +  HYIYT++ L+ A  + A DFL         V     ++++GL+NPHT  G+ +++GF+VS YT+A+ P +A  L++P+R
Sbjct:   59 SCFPGNAAVKVENIGWVPMRNLRTGDRVLQANGAYSEVFGFSHRLRTSIHPFRRICTVT-KCMTASHGHYIYTKQKLVAAGAIKAGDFLATGVDEYEAVIGSEDVWEQGLYNPHTLTGEFVVEGFRVSCYTTAVRPDLAKTLLSPLR 204          
BLAST of Gchil3196.t1 vs. uniprot
Match: A0A1X6P3Z4_PORUM (HintN domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P3Z4_PORUM)

HSP 1 Score: 114 bits (286), Expect = 5.980e-25
Identity = 60/149 (40.27%), Postives = 84/149 (56.38%), Query Frame = 0
Query:  210 CFPAGALTVGGNGNLIRVEDLRVGNRVMVADGILSPVIDFSHAEKAIVFPFSQFITEGGKSLTVTSSHYIYTQRGLLPARDVSASDFLTLSNGTLA-LVTAKIQIFDRGLFNPHTSHGDIIIDGFKVSSYTSAIEPRIAHALMAPIRLL 357
            CFPA A      G  + ++ L VG+ V V+    S V  F+H   A  FPF +  T  G SLTVT SHY+Y    +  A  V   D L L       ++TA   + + GL+NP T HGDI ++G + S++T+A+EPR+A AL+AP+R L
Sbjct:  208 CFPASAQVELDTGRTVTMDQLAVGDNVRVSADAFSRVFLFTHKVAAGSFPFVKLTTASGASLTVTRSHYVYANGKMTAAGAVKLGDELELVGAAKCDIITATSPVTETGLYNPQTLHGDIFVNGIRASTFTTAVEPRVASALLAPLRAL 356          
The following BLAST results are available for this feature:
BLAST of Gchil3196.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IU59_9FLOR3.870e-6841.90Protein hedgehog n=1 Tax=Gracilariopsis chorda Tax... [more]
A0A2V3J669_9FLOR1.360e-3142.47Indian hedgehog B protein n=1 Tax=Gracilariopsis c... [more]
R7Q619_CHOCR4.200e-2939.88HintN domain-containing protein n=1 Tax=Chondrus c... [more]
A0A2V3IX71_9FLOR5.380e-2838.92Indian hedgehog B protein n=1 Tax=Gracilariopsis c... [more]
A0A2V3J2J0_9FLOR7.330e-2840.41Temptin n=1 Tax=Gracilariopsis chorda TaxID=448386... [more]
UPI001E1DDBBD2.390e-2738.41warthog protein 6-like n=1 Tax=Mercenaria mercenar... [more]
A0A1X6PD14_PORUM4.770e-2740.26Hint domain-containing protein n=1 Tax=Porphyra um... [more]
A0A2V3III2_9FLOR5.480e-2641.29Protein hedgehog n=1 Tax=Gracilariopsis chorda Tax... [more]
A0A2V3IFE3_9FLOR5.300e-2536.73Protein hedgehog n=1 Tax=Gracilariopsis chorda Tax... [more]
A0A1X6P3Z4_PORUM5.980e-2540.27HintN domain-containing protein n=1 Tax=Porphyra u... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003587Hint domain N-terminalSMARTSM00306hint_7coord: 208..301
e-value: 0.0033
score: 26.7
IPR001767Hedgehog protein, Hint domainPFAMPF01079Hintcoord: 206..361
e-value: 2.2E-19
score: 69.8
NoneNo IPR availableGENE3D2.170.16.10Hedgehog/Intein (Hint) domaincoord: 210..339
e-value: 3.8E-22
score: 81.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..142
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 164..213
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..88
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 164..211
NoneNo IPR availablePANTHERPTHR11889HEDGEHOGcoord: 186..357
NoneNo IPR availablePANTHERPTHR11889:SF31PROTEIN HEDGEHOGcoord: 186..357
NoneNo IPR availableCDDcd00081Hintcoord: 210..336
e-value: 2.34839E-8
score: 50.3454
IPR006141Intein N-terminal splicing regionPROSITEPS50817INTEIN_N_TERcoord: 210..281
score: 8.064648
IPR036844Hint domain superfamilySUPERFAMILY51294Hedgehog/intein (Hint) domaincoord: 210..338

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004382_piloncontigtig00004382_pilon:787098..788255 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3196.t1Gchil3196.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004382_pilon 787098..788255 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil3196.t1 ID=Gchil3196.t1|Name=Gchil3196.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=386bp
MSNQATPKASQYPSPSTKSRGFKTLAPNATTVFSSSQVSKQPRPSISKPS
TSPSASRKQNIKPPTATKAVSPINVVSATGSPTPSIYPDSSKAPKIVDFA
STGGRPEQSTTKGKEGNPLLEQGIILRGTHSPTAEPSKANPHLVFGHIPS
ASILPSFEVSTPSVQESPVALSDPQMSKSDASQSAIPSSENSSTPSPSTS
EAPQNDGSSCFPAGALTVGGNGNLIRVEDLRVGNRVMVADGILSPVIDFS
HAEKAIVFPFSQFITEGGKSLTVTSSHYIYTQRGLLPARDVSASDFLTLS
NGTLALVTAKIQIFDRGLFNPHTSHGDIIIDGFKVSSYTSAIEPRIAHAL
MAPIRLLDMLGSRPSLLSFFVRNPLVMRYFNIRSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003587Hint_dom_N
IPR001767Hedgehog_Hint
IPR006141Intein_N
IPR036844Hint_dom_sf