Gchil3271.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil3271.t1
Unique NameGchil3271.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length283
Homology
BLAST of Gchil3271.t1 vs. uniprot
Match: A0A2V3IY90_9FLOR (Hint domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IY90_9FLOR)

HSP 1 Score: 288 bits (738), Expect = 1.320e-93
Identity = 145/280 (51.79%), Postives = 191/280 (68.21%), Query Frame = 0
Query:    1 MSVEDRACTDGRLQFTTVFFPNTLPFFMSAQPHTRHLLLARVQDKPLLCGRFRFDQLAAFTFLSTARNVSVTWSNVFATVNTTLAHALGSERYTFVANQIHLLIKDQCLYTRITQQEIERQRGEKCFPSSASIIAPFGT-RSISSLRHADLVADANTFTSVIGWTHYHPHFQGWFLRIFVAGNITATVTHRHYLHTPRAIRAADQLRVGMLLRTPNGWRPITRIQTVWDHGLYNVQTRSGDIFVDGVLCTTYTKAVPPITAHALLAPVRLLAPFGLDLLS 279
            M+V+ RAC+ G  +F      +T+  F+  +P  R  +L  V    L+C RF FD+ A FTF +   ++SV   +    VN++LA ALG + YTF AN  HLLI DQCLYTR+TQ+E +RQ+GEKCFP+SA++    G  R I  L  A LVAD   FT  IGWTH  PHF+GWFLRI +  N++AT++H HY+++ R +  AD+L VG +LRT  GW+P+T ++ VW  GLYNVQT SG + VD +LC+TYTKAVPP+ AHALLAPVR+ APFGL LLS
Sbjct:   55 MAVDGRACSAGEFRFADRARVDTIAAFLRPEPSVRDWILL-VPRAVLVCDRFSFDRRATFTFAAPLMDLSVDLDSALGRVNSSLAVALGDDTYTFEANVSHLLINDQCLYTRMTQEEFDRQKGEKCFPASATVTTQHGAPRRIQHLATAQLVADGRAFTHTIGWTHRDPHFEGWFLRISLR-NVSATMSHGHYVYSKRGLITADELAVGTMLRTAYGWQPVTAVERVWRRGLYNVQTASGRLLVDHILCSTYTKAVPPVLAHALLAPVRMCAPFGLHLLS 332          
BLAST of Gchil3271.t1 vs. uniprot
Match: R7Q8Q4_CHOCR (HintN domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q8Q4_CHOCR)

HSP 1 Score: 96.3 bits (238), Expect = 2.280e-19
Identity = 63/191 (32.98%), Postives = 101/191 (52.88%), Query Frame = 0
Query:   84 LAHALGSERYTFVANQIHLLIKDQCLYTRITQQEIERQRGEK--CFPSSASIIAPFG-TRSISSLRHAD--LVADANTFTSVIGWTHYHPHFQGWFLRIFVAGNITATVTHRHYLHTPRAIRAADQLRVGMLLRTPNGW-RPITRIQTVWDHGLYNVQTRSGDIFVDGVLCTTYTKAVPPITAHALLAPVR 268
            +A    ++++ F  ++ ++ + ++C Y        E   G++  CFP+ A++    G  +++ ++R  D  LVAD  T++ V  WTH+       ++ +          T  HY+H   A      +R GM++RT  G    +T ++TV   GLYN QT  GDI V+G++ TTYT AV P  AHALLAPVR
Sbjct:  141 IATNTDNDKWDFEEDRKYIFLGNKCFYA-------ETNIGDRVECFPADATVTLQSGQVKTMDTVRIGDRVLVADG-TYSDVFAWTHHTSKSALSYIAVETDLGNRLVTTAGHYVHADGATLQMRDVRKGMVMRTAEGADATVTAVRTVKAKGLYNPQTTHGDIVVNGLIATTYTDAVQPGAAHALLAPVR 323          
BLAST of Gchil3271.t1 vs. uniprot
Match: A0A2V3IE18_9FLOR (Desert hedgehog protein A n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IE18_9FLOR)

HSP 1 Score: 93.2 bits (230), Expect = 8.270e-18
Identity = 54/152 (35.53%), Postives = 85/152 (55.92%), Query Frame = 0
Query:  124 EKCFPSSASIIAPFGTRSISSLRHADLVA-------DANTFTSVIGWTHYHPHFQGWFLRIFVAGNITATVTHRHYLHTPRAIRAADQLRVGMLLRTPNGWRPITRIQTVWDHGLYNVQTRSGDIFVDGVLCTTYTKAVPPITAHALLAPVR 268
            E CFP+SA++    G    S++R ADL A       +    + V  +TH     + WF RI  A     ++T  HYL+    + AA  ++VG ++RT +G   + +++ V D GLY   +  GD+ VDG++C++Y++AV P  AHALL P+R
Sbjct:  295 EVCFPASATVTTADG----STVRMADLEAGQHIQHDEHGASSPVFLFTHRTLKREQWFYRISTASGHAVSITGNHYLYVNERLVAAHAVQVGNVVRTMSGPSAVVKVERVKDVGLYAPHSLHGDVVVDGIVCSSYSRAVAPGLAHALLLPLR 442          
BLAST of Gchil3271.t1 vs. uniprot
Match: A0A2V3J5K7_9FLOR (Indian hedgehog B protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5K7_9FLOR)

HSP 1 Score: 92.0 bits (227), Expect = 2.250e-17
Identity = 49/145 (33.79%), Postives = 80/145 (55.17%), Query Frame = 0
Query:  126 CFPSSASIIAPFGTRS-ISSLRHAD-LVADANTFTSVIGWTHYHPHFQGWFLRIFVAGNITATVTHRHYLHTPRAIRAADQLRVGMLLRTPNGWRPITRIQTVWDHGLYNVQTRSGDIFVDGVLCTTYTKAVPPITAHALLAPVR 268
            CFP SAS+    G+ + +  L   D ++   NT++ +  ++H   H +  F  ++ +     + T  H+++   A    ++++VG  LRT  G   + ++   W  GLYN QT  GDI V+GV+ +TYTK+V P  AHA LAP+R
Sbjct:  324 CFPESASVTLLDGSSARMWQLEVGDEVLVGPNTYSRIFAFSHRDAHVKKLFYTLYTSSGHAISATQGHFIYANNAAIPIERVQVGQSLRTITGSGVVVKVDRQWMKGLYNPQTVQGDIIVNGVVASTYTKSVVPAVAHAALAPLR 468          
BLAST of Gchil3271.t1 vs. uniprot
Match: A0A2V3III2_9FLOR (Protein hedgehog n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3III2_9FLOR)

HSP 1 Score: 83.2 bits (204), Expect = 2.630e-14
Identity = 57/150 (38.00%), Postives = 78/150 (52.00%), Query Frame = 0
Query:  123 GEKCFPSSASIIAPFGTRSISSLRHADLVADANTFTSVIGWTHYHPHFQGWFLRIFVAGNITATVTHRHYLHTPRA-IRAADQLRVGMLLRTPNGWRP--ITRIQTVWDHGLYNVQTRSGDIFVDGVLCTTYTKAVPPITAH-ALLAPVR 268
            G  CFP+SA + +  GT  +  L+  D V  AN ++ VI +TH        F+++        TVT  HY++     + AA  + V  +LR  N      I +I+ V   GLYN QT SG I V+G + +TYT AV P  AH ALL PVR
Sbjct:  371 GSACFPASARVYSSRGTVPMQDLKIGDRVKTANGYSDVIMFTHRSRSTIHTFVKLHTQSGRELTVTGGHYVYKQNGDLAAAATVSVSDVLRMANASEDGTIMKIEKVSGIGLYNPQTESGSIVVNGFITSTYTTAVEPKLAHMALLMPVR 520          
BLAST of Gchil3271.t1 vs. uniprot
Match: A0A1X6P3Z4_PORUM (HintN domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P3Z4_PORUM)

HSP 1 Score: 75.9 bits (185), Expect = 5.320e-12
Identity = 54/149 (36.24%), Postives = 78/149 (52.35%), Query Frame = 0
Query:  126 CFPSSASIIAPFG-TRSISSLRHADLV-ADANTFTSVIGWTHYHPHFQGWFLRIFVAGNITATVTHRHYLHTPRAIRAADQLRVGMLLRTPNGWRP--ITRIQTVWDHGLYNVQTRSGDIFVDGVLCTTYTKAVPPITAHALLAPVRLL 270
            CFP+SA +    G T ++  L   D V   A+ F+ V  +TH        F+++  A   + TVT  HY++    + AA  +++G  L      +   IT    V + GLYN QT  GDIFV+G+  +T+T AV P  A ALLAP+R L
Sbjct:  208 CFPASAQVELDTGRTVTMDQLAVGDNVRVSADAFSRVFLFTHKVAAGSFPFVKLTTASGASLTVTRSHYVYANGKMTAAGAVKLGDELELVGAAKCDIITATSPVTETGLYNPQTLHGDIFVNGIRASTFTTAVEPRVASALLAPLRAL 356          
BLAST of Gchil3271.t1 vs. uniprot
Match: A0A2V3IFE3_9FLOR (Protein hedgehog n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFE3_9FLOR)

HSP 1 Score: 73.9 bits (180), Expect = 6.630e-12
Identity = 50/153 (32.68%), Postives = 78/153 (50.98%), Query Frame = 0
Query:  124 EKCFPSSASI-IAPFGTRSISSLRHADLVADAN-TFTSVIGWTH-----YHPHFQGWFLRIFVAGNITATVTHRHYLHTPRAIRAADQLRVGMLLRTP-NGWRPITRIQTVWDHGLYNVQTRSGDIFVDGVLCTTYTKAVPPITAHALLAPVR 268
            E CFP +A++ +   G   + +LR  D V  AN  ++ V G++H      HP     F RI        T +H HY++T + + AA  ++ G  L T  + +  +   + VW+ GLYN  T +G+  V+G   + YT AV P  A  LL+P+R
Sbjct:   58 ESCFPGNAAVKVENIGWVPMRNLRTGDRVLQANGAYSEVFGFSHRLRTSIHP-----FRRICTVTKCM-TASHGHYIYTKQKLVAAGAIKAGDFLATGVDEYEAVIGSEDVWEQGLYNPHTLTGEFVVEGFRVSCYTTAVRPDLAKTLLSPLR 204          
BLAST of Gchil3271.t1 vs. uniprot
Match: A0A2V3IX71_9FLOR (Indian hedgehog B protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX71_9FLOR)

HSP 1 Score: 75.9 bits (185), Expect = 7.070e-12
Identity = 49/146 (33.56%), Postives = 79/146 (54.11%), Query Frame = 0
Query:  126 CFPSSASIIAPFGT-RSISSLRHADLV-ADANTFTSVIGWTHYHPHFQGWFLRIFVAGNITATVTHRHYLHTPRAIRAADQLRVG-MLLRTPNGWRPITRIQTVWDHGLYNVQTRSGDIFVDGVLCTTYTKAVPPITAHALLAPVR 268
            CFP+ A++    G+ + +  ++  D V  D   F+ V  +TH     +  F+ I  +   T ++T  HYL+    + AA  ++ G  L+   +    +T++ TV   GL+N QT  GDI V+G+  +TYT AV P  AHALL+P+R
Sbjct:  310 CFPADATVQLEDGSAKKMGDVQLGDRVMVDHGIFSPVFMFTHKLSTVRYGFVNIQTSSGNTLSLTPGHYLYVNGHLSAASTVKNGDTLMLADSSLTDVTQVSTVTSTGLFNPQTLHGDIVVNGLKASTYTTAVEPGLAHALLSPLR 455          
BLAST of Gchil3271.t1 vs. uniprot
Match: A0A7S1THN3_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1THN3_9RHOD)

HSP 1 Score: 75.5 bits (184), Expect = 1.060e-11
Identity = 49/156 (31.41%), Postives = 84/156 (53.85%), Query Frame = 0
Query:  123 GEKCFPSSASIIAPFGTR-SISSLRHADLVADA-NTFTSVIGWTHYHPHFQGWFLRIFVAGNITATVTHRHYLHTPRAIRAADQLRVGMLLRTPNGWRPITRIQTVWDHGLYNVQTRSGDIFVDGVLCTTYTKAVPPITAHALLAPVRLLAPFGLD 276
            G  CFP+ A++    G    +  L+  D V D  ++F++V G+TH     +  F+RI V G    T++  HYL+    +++ADQ+ +G ++       P++ +++  + GL+   T SGDI V+G+  + YT+ V P  AH  L P+R  +  GL 
Sbjct:  399 GSVCFPADATVELESGELIPMRLLKIGDRVRDTPSSFSTVFGFTHASTSERWRFVRI-VVGERFITLSAAHYLYVNGVLKSADQVVLGDIVEGS----PVSTVESTEELGLFAPHTMSGDIMVNGIRASCYTRHVNPTWAHMALVPLRFASLTGLS 549          
BLAST of Gchil3271.t1 vs. uniprot
Match: R7Q842_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q842_CHOCR)

HSP 1 Score: 75.5 bits (184), Expect = 1.290e-11
Identity = 49/152 (32.24%), Postives = 75/152 (49.34%), Query Frame = 0
Query:  126 CFPSSASIIAPFGTRSISSLRHADL---VADANTFTSVIGWTHYHPHFQGWFLRIFVAGNITATVTHRHYLHTPRAIRAADQLRVGMLLRTPNGWRPITRIQTVWDHGLYNVQTRSGDIFVDGVLCTTYTKAVPPITAHALLAPVRLLAPFG 274
            CFP SA+I    G+     L  A     V      + +  +TH +   +  F  +  A   + T+T  HYL+    + AA  +++G +L T  G   + R+  V   GL+   T  GD+ VDGV+ + Y++A+ P  AH LLAPVRLL  + 
Sbjct:  845 CFPESATIRLADGSSVPMHLLEAGTEIHVGREGKTSRIFAFTHKNRVRRTLFYALTTASGHSVTLTGSHYLYANGKLTAAGAVQIGDMLDTRAGNSQVVRVGRVHGKGLFAPHTLHGDLEVDGVVVSGYSRALNPTIAHGLLAPVRLLTKYA 996          
The following BLAST results are available for this feature:
BLAST of Gchil3271.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IY90_9FLOR1.320e-9351.79Hint domain-containing protein n=1 Tax=Gracilariop... [more]
R7Q8Q4_CHOCR2.280e-1932.98HintN domain-containing protein n=1 Tax=Chondrus c... [more]
A0A2V3IE18_9FLOR8.270e-1835.53Desert hedgehog protein A n=1 Tax=Gracilariopsis c... [more]
A0A2V3J5K7_9FLOR2.250e-1733.79Indian hedgehog B protein n=1 Tax=Gracilariopsis c... [more]
A0A2V3III2_9FLOR2.630e-1438.00Protein hedgehog n=1 Tax=Gracilariopsis chorda Tax... [more]
A0A1X6P3Z4_PORUM5.320e-1236.24HintN domain-containing protein n=1 Tax=Porphyra u... [more]
A0A2V3IFE3_9FLOR6.630e-1232.68Protein hedgehog n=1 Tax=Gracilariopsis chorda Tax... [more]
A0A2V3IX71_9FLOR7.070e-1233.56Indian hedgehog B protein n=1 Tax=Gracilariopsis c... [more]
A0A7S1THN3_9RHOD1.060e-1131.41Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
R7Q842_CHOCR1.290e-1132.24Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.170.16.10Hedgehog/Intein (Hint) domaincoord: 126..252
e-value: 7.9E-17
score: 64.0
IPR001767Hedgehog protein, Hint domainPFAMPF01079Hintcoord: 124..271
e-value: 4.3E-9
score: 36.2
IPR036844Hint domain superfamilySUPERFAMILY51294Hedgehog/intein (Hint) domaincoord: 126..251

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004382_piloncontigtig00004382_pilon:1283041..1283889 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3271.t1Gchil3271.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004382_pilon 1283041..1283889 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil3271.t1 ID=Gchil3271.t1|Name=Gchil3271.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=283bp
MSVEDRACTDGRLQFTTVFFPNTLPFFMSAQPHTRHLLLARVQDKPLLCG
RFRFDQLAAFTFLSTARNVSVTWSNVFATVNTTLAHALGSERYTFVANQI
HLLIKDQCLYTRITQQEIERQRGEKCFPSSASIIAPFGTRSISSLRHADL
VADANTFTSVIGWTHYHPHFQGWFLRIFVAGNITATVTHRHYLHTPRAIR
AADQLRVGMLLRTPNGWRPITRIQTVWDHGLYNVQTRSGDIFVDGVLCTT
YTKAVPPITAHALLAPVRLLAPFGLDLLSLIM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001767Hedgehog_Hint
IPR036844Hint_dom_sf