Gchil657.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil657.t1
Unique Name	Gchil657.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	168

Homology

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BLAST of Gchil657.t1 vs. uniprot
Match: A0A2V3IEN5_9FLOR (Tyrosine-protein phosphatase non-receptor type 20 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEN5_9FLOR)

HSP 1 Score: 143 bits (361), Expect = 1.480e-37
Identity = 93/151 (61.59%), Postives = 103/151 (68.21%), Query Frame = 0

Query:    1 MRTRDSARSATARASAAQRAYARIPFGAG--LSRLRRRAAAAAQRAVPSSSLPTSSVSECSTPSHNVLHAPSSQPASISSPPRPPLPSPTNRDDYITVLEARMHQMEKVPTNSFYHSYAGEFDMLMGVDRKAVRSLSEFETSTKVENAYRN 149
            MRTRDS+R     AS +QR  +RIPFG G    RLRRRA  A      SSS P S       P    LH  + QPA  SSPP+   P+PTNRD YI  LEARM QMEKVPT+SFYHSYAGEFD L+ VDR+AVRSLSEFETST+VENAYRN
Sbjct:    1 MRTRDSSR-----ASPSQRPTSRIPFGVGARFDRLRRRARGAPPNQASSSSTPRS----VPIPHLPHLHRQTPQPA--SSPPKSNPPAPTNRDAYIAALEARMRQMEKVPTSSFYHSYAGEFDTLLTVDRRAVRSLSEFETSTRVENAYRN 140

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BLAST of Gchil657.t1 vs. uniprot
Match: R7Q9B5_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q9B5_CHOCR)

HSP 1 Score: 87.4 bits (215), Expect = 5.550e-17
Identity = 44/72 (61.11%), Postives = 52/72 (72.22%), Query Frame = 0

Query:   78 SPPRPPLPSPTNRDDYITVLEARMHQMEKVPTNSFYHSYAGEFDMLMGVDRKAVRSLSEFETSTKVENAYRN 149
            S P P  P   +R  Y+  L+ARM QME+VPT SF+ SYAGEFDML G DR+A R   EFETSTK+EN+YRN
Sbjct:  195 SSPAPLKPVLMSRPSYMRNLQARMEQMERVPTRSFFQSYAGEFDMLQGEDRRAFRREHEFETSTKIENSYRN 266

The following BLAST results are available for this feature:

BLAST of Gchil657.t1 vs. uniprot

BLAST of Gchil657.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3IEN5_9FLOR	1.480e-37	61.59	Tyrosine-protein phosphatase non-receptor type 20 ...	[more]
R7Q9B5_CHOCR	5.550e-17	61.11	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..74
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..92
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 145..167

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004380_pilon	contig	tig00004380_pilon:763630..764421 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil657.t1	Gchil657.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004380_pilon 763630..764421 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil657.t1 ID=Gchil657.t1|Name=Gchil657.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=168bp
MRTRDSARSATARASAAQRAYARIPFGAGLSRLRRRAAAAAQRAVPSSSL
PTSSVSECSTPSHNVLHAPSSQPASISSPPRPPLPSPTNRDDYITVLEAR
MHQMEKVPTNSFYHSYAGEFDMLMGVDRKAVRSLSEFETSTKVENAYRNS
NPGATPRNNSSLLANGV*