Gchil576.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil576.t1
Unique NameGchil576.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length137
Homology
BLAST of Gchil576.t1 vs. uniprot
Match: A0A2V3IZU2_9FLOR (ATP-dependent Clp protease adapter protein CLPS1, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZU2_9FLOR)

HSP 1 Score: 214 bits (546), Expect = 1.010e-69
Identity = 107/134 (79.85%), Postives = 128/134 (95.52%), Query Frame = 0
Query:    3 SPVHKVLHASSSRSVCASRIAQQAARNTSVMVAAPPSKQKVLEKKVNTEQKKEFKQPDMYRLFIFNDPINTRERVINVLLQTCQGLSFSRAYSAMQEAHENGRGLVLVIAQEIAEHYCASINSAGILSTVEPDK 136
            S ++ +L+ASSSRSVCASRIAQQAARNT VMV+APP+++ VL+K+VNTE+KKEFK+PDMYRLFI+NDP+N RERV++VLL+TCQGL+FSRAY+AMQEAHENGRGLVL+IAQEIAEHYCA+INS GILSTVEPDK
Sbjct:    2 STINSLLNASSSRSVCASRIAQQAARNTIVMVSAPPAQETVLDKQVNTEKKKEFKKPDMYRLFIYNDPVNKRERVVDVLLKTCQGLTFSRAYAAMQEAHENGRGLVLIIAQEIAEHYCATINSDGILSTVEPDK 135          
BLAST of Gchil576.t1 vs. uniprot
Match: A0A5J4YNL5_PORPP (ATP-dependent Clp protease adapter protein CLPS1, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YNL5_PORPP)

HSP 1 Score: 99.4 bits (246), Expect = 9.220e-24
Identity = 47/76 (61.84%), Postives = 58/76 (76.32%), Query Frame = 0
Query:   61 MYRLFIFNDPINTRERVINVLLQTCQGLSFSRAYSAMQEAHENGRGLVLVIAQEIAEHYCASINSAGILSTVEPDK 136
            MYRL+I NDP NTRE VI  LL+    L+FSRAY+AMQ AHE G+GLV++  QE+AEHYC+ I + GI STV PD+
Sbjct:   92 MYRLYILNDPFNTREFVIQTLLKVIPTLTFSRAYAAMQTAHETGQGLVIISPQEMAEHYCSQILAQGIFSTVTPDE 167          
BLAST of Gchil576.t1 vs. uniprot
Match: A0A7S0ZJ21_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZJ21_9RHOD)

HSP 1 Score: 96.3 bits (238), Expect = 9.200e-23
Identity = 53/107 (49.53%), Postives = 69/107 (64.49%), Query Frame = 0
Query:   31 SVMVAAPPSKQKVLEKK-VNTEQKKEFKQPDMYRLFIFNDPINTRERVINVLLQTCQGLSFSRAYSAMQEAHENGRGLVLVIAQEIAEHYCASINSAGILSTVEPDK 136
            S+     P KQ V  K+ VN E  K      MYR++I +DP NTRE VI+VLL+   GL+FSRAY AM  AH  G+GLV+V+ QE+AEHY + I + G+LS   PD+
Sbjct:   47 SLSAVKAPEKQIVTPKRQVNDETNK----GKMYRVYIIDDPFNTREYVISVLLEVVSGLTFSRAYDAMMSAHTRGQGLVVVVTQEVAEHYSSQIMNKGVLSMCVPDE 149          
BLAST of Gchil576.t1 vs. uniprot
Match: A0A7J7IJQ4_9RHOD (ClpS domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IJQ4_9RHOD)

HSP 1 Score: 78.6 bits (192), Expect = 1.610e-15
Identity = 44/95 (46.32%), Postives = 61/95 (64.21%), Query Frame = 0
Query:   43 VLEKKVNTEQKKEFKQPD---MYRLFIFNDPINTRERVINVLLQTCQGLSFSRAYSAMQEAHENGRGLVLVIAQEIAEHYCASINSAGILSTVEP 134
            VLE+ V  E+    K  D    Y+L +FND +NTRERV+NVLL+   GLS + A+S MQ+AH  G+ LV +   E+AE YC  + S G++S +EP
Sbjct:   88 VLERAVVREKTTATKGVDPGKKYKLLLFNDQVNTRERVVNVLLKCIPGLSKTDAHSIMQKAHTAGKALVGIWVFELAEAYCDLLRSEGLVSDIEP 182          
BLAST of Gchil576.t1 vs. uniprot
Match: M1VIM3_CYAM1 (ClpS domain-containing protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VIM3_CYAM1)

HSP 1 Score: 71.2 bits (173), Expect = 1.090e-12
Identity = 37/73 (50.68%), Postives = 47/73 (64.38%), Query Frame = 0
Query:   62 YRLFIFNDPINTRERVINVLLQTCQGLSFSRAYSAMQEAHENGRGLVLVIAQEIAEHYCASINSAGILSTVEP 134
            Y+L +FND  NTRERV+ VLL+   GLS   A S MQ+AH  G  LV V   E+AE YC  + S G++S +EP
Sbjct:  113 YKLLLFNDEKNTRERVVEVLLKCIPGLSKLDAQSIMQKAHTTGMALVGVWVFELAEAYCDLLRSEGLVSDIEP 185          
BLAST of Gchil576.t1 vs. uniprot
Match: UPI001C4046C5 (ATP-dependent Clp protease adapter ClpS n=1 Tax=Anthocerotibacter panamensis TaxID=2857077 RepID=UPI001C4046C5)

HSP 1 Score: 67.8 bits (164), Expect = 3.030e-12
Identity = 38/93 (40.86%), Postives = 53/93 (56.99%), Query Frame = 0
Query:   43 VLEKKVNTEQKKEFKQPDMYRLFIFNDPINTRERVINVLLQTCQGLSFSRAYSAMQEAHENGRGLVLVIAQEIAEHYCASINSAGILSTVEPD 135
            ++EK  +   KK   Q   Y++ + NDP N+ E V+ VLL T   L   +A   M EAH +G  +V+V A E AE YC  + S G+ ST+EPD
Sbjct:    5 IIEKPKSEVSKKPAPQ---YKVLLHNDPHNSMEHVVEVLLMTIPRLKPPQAIGIMMEAHTSGVAVVVVCALEHAEFYCEQLKSHGLTSTIEPD 94          
BLAST of Gchil576.t1 vs. uniprot
Match: A0A2W4U5K0_9CYAN (ATP-dependent Clp protease adapter ClpS n=2 Tax=Leptolyngbyaceae TaxID=1890438 RepID=A0A2W4U5K0_9CYAN)

HSP 1 Score: 65.9 bits (159), Expect = 1.840e-11
Identity = 29/74 (39.19%), Postives = 46/74 (62.16%), Query Frame = 0
Query:   62 YRLFIFNDPINTRERVINVLLQTCQGLSFSRAYSAMQEAHENGRGLVLVIAQEIAEHYCASINSAGILSTVEPD 135
            YR+ + ND +N  E V+  L+ T   L+  +A   M +AH +G+GLV++   E AE YC ++ + G+ ST+EPD
Sbjct:   24 YRVLLHNDDVNGMEYVVECLVSTVPALTAPQAIDIMMQAHNSGKGLVIICELEHAEFYCETLCAKGLTSTIEPD 97          
BLAST of Gchil576.t1 vs. uniprot
Match: A0A0V7ZXW8_9CYAN (ATP-dependent Clp protease adapter protein ClpS n=1 Tax=Mastigocoleus testarum BC008 TaxID=371196 RepID=A0A0V7ZXW8_9CYAN)

HSP 1 Score: 65.1 bits (157), Expect = 3.230e-11
Identity = 32/74 (43.24%), Postives = 45/74 (60.81%), Query Frame = 0
Query:   62 YRLFIFNDPINTRERVINVLLQTCQGLSFSRAYSAMQEAHENGRGLVLVIAQEIAEHYCASINSAGILSTVEPD 135
            YR+ + NDP N+ E V+ VLL T   L+  +A S M EAH +G  LV+  A E AE Y  ++   G+ ST+EP+
Sbjct:   19 YRVLLHNDPFNSMEYVVQVLLTTVPSLTQPQAVSIMMEAHTSGVALVITCALEHAEFYSETLKENGLTSTIEPE 92          
BLAST of Gchil576.t1 vs. uniprot
Match: A0A2E0MXK2_9GAMM (ATP-dependent Clp protease adapter protein ClpS n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E0MXK2_9GAMM)

HSP 1 Score: 51.6 bits (122), Expect = 8.120e-6
Identity = 29/88 (32.95%), Postives = 48/88 (54.55%), Query Frame = 0
Query:   53 KKEFKQPDMYRLFIFNDPINTRERVINVLLQTCQGLSFSRAYSAMQEAHENGRGLVLVIAQEIAEHYCASINSAG------ILSTVEP 134
            K + K P+++R+ IFND     E V+  +LQT  G +  +A   M   H +GRG+  +  ++IAE  C+ IN+        ++S +EP
Sbjct:   22 KPKLKNPNLFRVIIFNDDYTPMEFVV-FILQTLFGFNRDKATQIMLAVHTHGRGVCGIFTKDIAETRCSQINNLAKENEHPLISEIEP 108          
The following BLAST results are available for this feature:
BLAST of Gchil576.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A2V3IZU2_9FLOR1.010e-6979.85ATP-dependent Clp protease adapter protein CLPS1, ... [more]
A0A5J4YNL5_PORPP9.220e-2461.84ATP-dependent Clp protease adapter protein CLPS1, ... [more]
A0A7S0ZJ21_9RHOD9.200e-2349.53Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A7J7IJQ4_9RHOD1.610e-1546.32ClpS domain-containing protein n=1 Tax=Cyanidiococ... [more]
M1VIM3_CYAM11.090e-1250.68ClpS domain-containing protein n=1 Tax=Cyanidiosch... [more]
UPI001C4046C53.030e-1240.86ATP-dependent Clp protease adapter ClpS n=1 Tax=An... [more]
A0A2W4U5K0_9CYAN1.840e-1139.19ATP-dependent Clp protease adapter ClpS n=2 Tax=Le... [more]
A0A0V7ZXW8_9CYAN3.230e-1143.24ATP-dependent Clp protease adapter protein ClpS n=... [more]
A0A2E0MXK2_9GAMM8.120e-632.95ATP-dependent Clp protease adapter protein ClpS n=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003769Adaptor protein ClpS, corePFAMPF02617ClpScoord: 57..125
e-value: 3.6E-15
score: 55.5
IPR014719Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-likeGENE3D3.30.1390.10coord: 37..134
e-value: 2.4E-20
score: 74.1
IPR014719Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-likeSUPERFAMILY54736ClpS-likecoord: 55..133
IPR022935ATP-dependent Clp protease adaptor protein ClpSPANTHERPTHR33473ATP-DEPENDENT CLP PROTEASE ADAPTER PROTEIN CLPS1, CHLOROPLASTICcoord: 17..135

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004380_piloncontigtig00004380_pilon:372884..373374 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil576.t1Gchil576.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004380_pilon 372884..373374 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil576.t1 ID=Gchil576.t1|Name=Gchil576.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=137bp
MSSPVHKVLHASSSRSVCASRIAQQAARNTSVMVAAPPSKQKVLEKKVNT
EQKKEFKQPDMYRLFIFNDPINTRERVINVLLQTCQGLSFSRAYSAMQEA
HENGRGLVLVIAQEIAEHYCASINSAGILSTVEPDK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003769ClpS_core
IPR014719Ribosomal_L7/12_C/ClpS-like
IPR022935ClpS