Gchil577.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil577.t1
Unique NameGchil577.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length205
Homology
The following BLAST results are available for this feature:
BLAST of Gchil577.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 196..204
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 33..79
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 80..103
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..32
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 168..195
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 104..109
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 136..167
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 110..135
NoneNo IPR availableTMHMMTMhelixcoord: 173..195
NoneNo IPR availableTMHMMTMhelixcoord: 12..34
NoneNo IPR availableTMHMMTMhelixcoord: 106..128
NoneNo IPR availableTMHMMTMhelixcoord: 80..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004380_piloncontigtig00004380_pilon:373574..374244 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil577.t1Gchil577.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004380_pilon 373574..374244 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil577.t1 ID=Gchil577.t1|Name=Gchil577.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=205bp
MGKTHFCFGASFFVLATCGTLLLTWTCWWLWIVGPSVPARRPFYNSLSDV
PPLVREASSYSSEPIFMYSLAGGWPTRNSIVRLLASALAVLCSFSFSFVA
TIASQAVARLTFCTVLVCTTVVSLVAAGCDLASIISTARECAASECRTEV
PKQILDTGHICQCNVDGWFYFTLLADIVLFVSAICCVVLTIVPILKRRGV
DPAY*
back to top