Gchil3594.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil3594.t1
Unique NameGchil3594.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length986
Homology
BLAST of Gchil3594.t1 vs. uniprot
Match: R7QG36_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QG36_CHOCR)

HSP 1 Score: 707 bits (1826), Expect = 9.450e-240
Identity = 374/691 (54.12%), Postives = 479/691 (69.32%), Query Frame = 0
Query:  300 FAGTVQYLGHVIKPGQHAIQEAQTAALREVQPPSTQKQLRSFLGLCNVYRRFVPQYSHIAAPLNSKLRKGQPVQLDQFRQAEVEAFDTPKTKIITAPVLALPIPNLPYSVDTDSSEYQVGCALFQTHPDGERKPIGYWSRSLNAAEKKYSVSEKECLAVVWALTTLRPYLQGERFTVNTDHSSLRWLLSITDPSGRLTRWRLRLSEFDFEVKYKKGLADVQADALSRLKTLGETQGEIDEEIPCFYTETHSPPFEEEEQKTLDDYLDA-DPFLAL-ADTEPSV--QLERILCTELLNEQQADAFCASIRSRLNGGEELHFSLDSRRIMLRHVEKHDQIVIPHVFKSRIHHPAHYSRLSGHLGRTKLFMTLRRYFYWRTLAMDCHATVSLCTACAKNRVRLYRKRKSMTLFQAKAPLQYVSIDILGELIRSRRGYRYLLVITDRFSKLVRTVPLKRITAAVITQAFIKLWVFIYGPPKVLLSDNGKQFVAKFFQNVCRIMGIRNVFTTTYHPQCNGHVERFNRTLIAALRHSIEDHPKEWDKFTDTLCYAYNTQMHSSIKTAPFDLVLSRNPPALAVLLDDKTGLDAPTPAK-YHLKWRNDLKPRAEEAAKELSKTQARYKRNYDARRRRRNTPVRVGGHVFVRVERPDKQEESPHKLLPIAAGPFKVVDLNEDTVVIKTGEDVERVSGDGV 985
            F   ++YLGHV++PG   +  A+T AL +V+ P TQ QLRSFLGLCNVYRRFVP Y+ I  PLN  L+KGQPVQL+ F +   +AF   K  I+   VLALP  +LPY VDTD+S+YQ+G ALFQTHPD +RKPIG++SR+L AAE+ YSVSEKE LAV+WA+ TLRPYL GE F V+TDH+SLRWL+++TDPSGRL RWRLRLSEFDFE+KYKKG  + QADALSRL+T GET  EID+EIPCF  E      E EE        DA D  LAL   T P    Q + +   EL+ EQ  D FC  I+  ++ G                  K  Q+VIP   K R+   +HY++L+GH G  KL+ TLRRYFYW T+A+DC+A    C ACA+ RV+L +  K M LF +KAPL++ +IDILGELI ++RG RY+LVI+DR+SKLVRTVPLK+I+AA I QAF+  WVF+YGPP  LLSDNG QF A+FFQNVCRI+GIRNVFTTTYHPQ NG VERF+RTL +ALR  + +HPK+WD F+D + +AYNTQ+H +   APF+LVL+R P ++A  L  +  L+  +  + Y+LKW++ L+   + A + L K QARYKRN+DAR R+    +  G +VF+R ++     E  HKL  +A GP++V   ++ TVVI  G+  ERVS D V
Sbjct:   38 FVEKIKYLGHVVRPGTLEVDAARTVALEQVRYPQTQTQLRSFLGLCNVYRRFVPHYAKIVHPLNQLLKKGQPVQLEGFDEPCKKAFHKLKDAILAPLVLALPKKDLPYPVDTDASDYQIGAALFQTHPDAQRKPIGFFSRTLAAAERNYSVSEKEFLAVIWAVQTLRPYLYGEHFIVHTDHASLRWLMNVTDPSGRLIRWRLRLSEFDFEIKYKKGKGNSQADALSRLRTAGETVDEIDDEIPCFMAEPAEGTVENEES------FDAIDDILALEGGTAPDRLDQFQAVTPEELIREQAVDPFCNRIKEEIDAG------------------KFVQLVIPQSLKDRVLGLSHYAKLAGHPGGRKLYKTLRRYFYWSTMALDCYAVAKNCAACARERVKLRKNTKEMKLFTSKAPLEFAAIDILGELITTKRGNRYILVISDRYSKLVRTVPLKKISAAHIAQAFVHHWVFVYGPPVKLLSDNGTQFTARFFQNVCRILGIRNVFTTTYHPQANGQVERFDRTLTSALRKYVGEHPKDWDLFSDAVTFAYNTQVHRTTNIAPFELVLARAPRSIA--LQAQPSLEGFSSNRAYYLKWQSWLESLMKGADRSLRKEQARYKRNFDARLRKPQYQIPPGSYVFLR-KKQGTASEPKHKLAQVATGPYQVRRSDQHTVVIAIGDQEERVSRDRV 701          
BLAST of Gchil3594.t1 vs. uniprot
Match: R7QFB9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFB9_CHOCR)

HSP 1 Score: 656 bits (1693), Expect = 2.500e-220
Identity = 350/690 (50.72%), Postives = 455/690 (65.94%), Query Frame = 0
Query:  300 FAGTVQYLGHVIKPGQHAIQEAQTAALREVQPPSTQKQLRSFLGLCNVYRRFVPQYSHIAAPLNSKLRKGQPVQLDQFRQAEVEAFDTPKTKIITAPVLALPIPNLPYSVDTDSSEYQVGCALFQTHPDGERKPIGYWSRSLNAAEKKYSVSEKECLAVVWALTTLRPYLQGERFTVNTDHSSLRWLLSITDPSGRLTRWRLRLSEFDFEVKYKKGLADVQADALSRLKTLGETQGEIDEEIPCFYTETHSPPFEEEEQKTLDDYLDADPFLALADTEPSVQLERILCTELLNEQQADAFCASIRSRLNGGEELHFSLDSRRI---MLRHVEKHDQIVIPHVFKSRIHHPAHYSRLSGHLGRTKLFMTLRRYFYWRTLAMDCHATVSLCTACAKNRVRLYRKRKSMTLFQAKAPLQYVSIDILGELIRSRRGYRYLLVITDRFSKLVRTVPLKRITAAVITQAFIKLWVFIYGPPKVLLSDNGKQFVAKFFQNVCRIMGIRNVFTTTYHPQCNGHVERFNRTLIAALRHSIEDHPKEWDKFTDTLCYAYNTQMHSSIKTAPFDLVLSRNPPALAVLLDDKTGLDAPTPAK-YHLKWRNDLKPRAEEAAKELSKTQARYKRNYDARRRRRNTPVRVGGHVFVRVERPDKQEESPHKLLPIAAGPFKVVDLNEDTVVIKTGEDVERVSGDGV 985
            F   ++YLG V++PG   +  A+TAAL +V+ P TQ QLRSFLGLCNVYRRFVP Y+ I  PLN  L+KGQ +QL+   +   + F   K  I+  PVLALP  +LPYSVDTD+S+YQ+G ALFQTHPD +RKPI ++SR+L AAE+ YSVSEKECLAV+WA+ TL PYL GE F V+TD++SLR L+++TDPSGRL RWRLRLSEFDFE+KYKKG A+ QADALSRL+T  ET                                                        L+ EQ  D FC  I+  ++ G+   FS+++      + R   +  Q+VIP   + R+   +HY++L+G  G  KL+ TLRRYFYW T+A+DC+A    C ACA+ RV+L R  K M LF  KAPL++V+IDILGE I  +RG RY+LVI+DR+SKLVRTVPLK+I+AA I QAF+   VF+YGPP  LLSDNG QF A+FFQNVCRI+GI NVFTTTYHPQ NG VERFNRTL +ALR  + +HPK+WD F+D + +AYNTQ+H +   APF+LVL+R P ++A  L  +  L+  +  + Y+LKW++ L+   + A K L K QARYKRN+DAR R+    +  G +VF+R E+    E   HKL  +A GP++V +  E+TVVI  G+  ERVS D V
Sbjct:   68 FVEKIKYLGRVVRPGTLEVDAARTAALEQVRYPQTQTQLRSFLGLCNVYRRFVPHYAKIEHPLNQLLKKGQLLQLEGLDEPCEKDFHKLKDAILEPPVLALPKKDLPYSVDTDASDYQIGAALFQTHPDAQRKPIRFFSRTLAAAERNYSVSEKECLAVIWAVQTLGPYLYGEHFVVHTDYASLRQLMNVTDPSGRLIRWRLRLSEFDFEIKYKKGKANSQADALSRLRTAEET--------------------------------------------------------LIREQAVDPFCNRIKEEMDAGKVRTFSMETEEFEGTLCRTAAEFAQVVIPQSLRDRVLSLSHYAKLAGRPGGRKLYKTLRRYFYWPTMALDCYAVAKNCAACARERVKLRRNTKEMKLFTPKAPLEFVAIDILGEQITRKRGNRYILVISDRYSKLVRTVPLKKISAAYIAQAFVHHLVFVYGPPVKLLSDNGTQFTARFFQNVCRILGICNVFTTTYHPQSNGQVERFNRTLTSALRKYVGEHPKDWDLFSDAVTFAYNTQVHRTTNIAPFELVLARAPRSIA--LQAQPSLEGFSSNRAYYLKWQSWLESLIKGAGKSLRKEQARYKRNFDARLRKSKYDIPSGSYVFLRKEQGTATEPK-HKLAQVATGPYQVKESTENTVVIAIGDQEERVSRDRV 698          
BLAST of Gchil3594.t1 vs. uniprot
Match: R7QJ39_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJ39_CHOCR)

HSP 1 Score: 632 bits (1630), Expect = 5.740e-211
Identity = 340/680 (50.00%), Postives = 439/680 (64.56%), Query Frame = 0
Query:  306 YLGHVIKPGQHAIQEAQTAALREVQPPSTQKQLRSFLGLCNVYRRFVPQYSHIAAPLNSKLRKGQPVQLDQFRQAEVEAFDTPKTKIITAPVLALPIPNLPYSVDTDSSEYQVGCALFQTHPDGERKPIGYWSRSLNAAEKKYSVSEKECLAVVWALTTLRPYLQGERFTVNTDHSSLRWLLSITDPSGRLTRWRLRLSEFDFEVKYKKGLADVQADALSRLKTLGETQGEIDEEIPCFYTETHSPPFEEEEQKTLDDYLDADPFLALADTEPSVQLERILCTELLNEQQADAFCASIRSRLNGGEELHFSLDSRRIMLRHVEKHDQIVIPHVFKSRIHHPAHYSRLSGHLGRTKLFMTLRRYFYWRTLAMDCHATVSLCTACAKNRVRLYRKRKSMTLFQAKAPLQYVSIDILGELIRSRRGYRYLLVITDRFSKLVRTVPLKRITAAVITQAFIKLWVFIYGPPKVLLSDNGKQFVAKFFQNVCRIMGIRNVFTTTYHPQCNGHVERFNRTLIAALRHSIEDHPKEWDKFTDTLCYAYNTQMHSSIKTAPFDLVLSRNPPALAVLLDDKTGLDAPTPAKYHLKWRNDLKPRAEEAAKELSKTQARYKRNYDARRRRRNTPVRVGGHVFVRVERPDKQEESPHKLLPIAAGPFKVVDLNEDTVVIKTGEDVERVSGDGV 985
            YLGHV++PG   +  A+T AL +V+ P TQ QLRSFLGLCNVYRRFVP Y+ IA PLN  L+KGQPVQL+ F +   +AF   K  I+  PVL LP  NLPYSV+TD+S+YQ+G ALFQTHP  +RKPI ++SR+L AAE+ YSVSEKECLAV+WA+ TLRPYL GE F V+TDH+SLRWL+++TDPSGRL RWRLRLS+FDFE+KYKKG A+ QADALSRL+T GET  EID+EIPCF  E      E+EE                         E +   +    + +  +C  + +  +G   +      R   LR                         ++    GR +     ++ FYW T+A+DC+A    C ACA+ RV+L R    M LF  KAPL++V+IDILGELI ++RG RY+LVI+DR+SKLVRTVPLK+I+ A I QAF+  WVF+YGPP  LLSDNG QF A+FFQNVCRI+GIRNVFT TYHPQ NG VE FNRTL +ALR  + +HPK+WD F+D +  +YNTQ+H +    PF+LVL+R P ++A+ +   T  +  +   Y++KW++ L+     A K L K QARYKRN+DAR R     +  G +VF+R E+    E   HKL  +A G + V   ++ TVVI  G+  ERVS D V
Sbjct:   30 YLGHVVRPGTLEVDAARTVALEQVRYPQTQTQLRSFLGLCNVYRRFVPHYAKIAHPLNQLLKKGQPVQLEGFDEPCEKAFHKLKDAILAPPVLVLPKENLPYSVETDASDYQIGAALFQTHPGAQRKPIEFFSRTLAAAERNYSVSEKECLAVIWAVQTLRPYLYGEHFIVHTDHASLRWLMNVTDPSGRLIRWRLRLSKFDFEIKYKKGKANSQADALSRLRTAGETVDEIDDEIPCFIAEPAEGTVEDEES------------------------ENVQHGDRGTRRNSMPYCGGVCT--SGNTTIVKGPRPRVKPLR-------------------------KIGRPPGRQETLQDNQKIFYWPTMALDCYAVAKNCAACARERVKLRRNTNEMKLFTPKAPLEFVAIDILGELITTKRGNRYILVISDRYSKLVRTVPLKKISVAHIAQAFVHHWVFLYGPPVKLLSDNGTQFTARFFQNVCRILGIRNVFTNTYHPQANGQVEGFNRTLTSALRKYVGEHPKDWDLFSDAVTLSYNTQVHRTTNITPFELVLARAPRSIALQVQP-TLENFSSSRAYYMKWQSWLESLMRGADKSLRKEQARYKRNFDARLRNPQYEIPPGSYVFLRKEQGTASEPK-HKLAQVATGLYHVRRSDQHTVVIAIGDQEERVSRDRV 656          
BLAST of Gchil3594.t1 vs. uniprot
Match: UPI001E1E1407 (uncharacterized protein LOC123543642 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E1407)

HSP 1 Score: 600 bits (1548), Expect = 7.400e-196
Identity = 358/944 (37.92%), Postives = 500/944 (52.97%), Query Frame = 0
Query:  225 MLEEGLIKAAQSAWASPVVLGPKPDGSLRFCIDYRKLNAVTVRDTYPLPRMDEFVDSLGEANVFTTLDANSGYWQ----------------------------------------------------------------------------------------------FAGTVQYLGHVIKPGQHAIQEAQTAALREVQPPSTQKQLRSFLGLCNVYRRFVPQYSHIAAPLNSKLRKGQPVQLDQFRQAEVEAFDTPKTKIITAPVLALPIPNLPYSVDTDSSEYQVGCALFQTHPDGERKPIGYWSRSLNAAEKKYSVSEKECLAVVWALTTLRPYLQGERFTVNTDHSSLRWLLSITDPSGRLTRWRLRLSEFDFEVKYKKGLADVQADALSRLKT----LGETQGEIDEEIPCFYTETHSPPFEEEEQKTLDDYLDADPFLALADTE----PSVQLE-------------------------------------------------------------------------------RILCTELLNEQQADAFCASIRSRLNGGEELHFSLDSRRIMLRH--VEKHDQIVIPHVFKSRIHHPAHYSRLSGHLGRTKLFMTLRRYFYWRTLAMDCHATVSLCTACAKNRVRLYRKRKSMTLFQAKAPLQYVSIDILGELIRSRRGYRYLLVITDRFSKLVRTVPLKRITAAVITQAFIKLWVFIYGPPKVLLSDNGKQFVAKFFQNVCRIMGIRNVFTTTYHPQCNGHVERFNRTLIAALRHSIEDHPKEWDKFTDTLCYAYNTQMHSSIKTAPFDLVLSRNPPALAVLLDDKTGLDAPTPAKYHLKWRNDLKPRAEEAAKELSKTQARYKRNYDARRRRRNTPVRVGGHVFVRVERPDKQEESPHKLLPIAAGPFKVVDLNEDTVVIKTGEDVERVSGDGV 985
            ML+  +I+   S WASP+VL  KPDGS RFC+DYR+LNA+TVRD+YPLPRMDE +DSLG+A +FTTLD NSGYWQ                                                                                              F  TV YLGHVI+PGQ ++ +  TAAL+  + P+TQ +LRSFLGLCNVYRRFV  ++ IAAPLN  LRKG+  QL      +V AF+T +  ++  P+LALP      ++DTD+S++Q+GC L QT PDG ++PIGYWSR+L +AEK YS +EKECLA+VWA+  LRPYL+ ++F + TDH SLRW+L+++D  GRL RWRLRL EFD+EV+Y  G     AD +SRL++    +      +D ++PCF  E    P       TL D   +DP     +T+    P V ++                                                                                I   E+ +EQ  DA C  +  R   G      +++  I++R+  ++   QIV+P   + R+    H+  ++GH G +K++ ++RR F+W+ +  D   TV  CT CAKNRV   ++   + LF A  PL++V++DILG L ++  G R+LLVITDRFSKL RTVPL+ ITA V+ +AF   WVF YGPP+ LL+DNG QF AKFF  VCR +GI  +FTT YHPQ NG VERFNRT+I +LR  +E    +WD +T  + + YN ++HSS+  APF+L+LSR PP L+V        D PT AK  L++   ++     A + L+++QARYK+N+D   + +N  VR    V++R E   +   +P KL     GP++VV+ +     ++ G+D   VS D +
Sbjct:    1 MLQAKVIEPTTSEWASPIVLVAKPDGSTRFCVDYRRLNAITVRDSYPLPRMDECIDSLGDAKIFTTLDCNSGYWQIPVRPEDREKTTFTSHEGLYWFLRMPFGLRNAPATFQRFVDITLSGLTWKTCLVYLDDIIVFSKTPTEHMAHLDAVLHRLYRAGLTLNLKKCHFFKETVDYLGHVIRPGQLSVAKKNTAALKVTKHPTTQTELRSFLGLCNVYRRFVKGFAKIAAPLNLLLRKGETPQLGPLSAEQVSAFETLRDALLNPPILALPRTEGALTLDTDASDHQLGCCLLQTQPDGSQRPIGYWSRALTSAEKNYSTTEKECLAIVWAILHLRPYLEQQKFIIRTDHHSLRWVLNLSDAQGRLARWRLRLLEFDYEVQYHPGAMHHGADMMSRLQSENPAIAAPTQPVDTDVPCFALENERNP-SLILPHTLRDAQMSDPSCCHLETQYGPHPRVDIDPNGLIGLVLPSGEFHLAIPPLSGVPLPLSIVTEIPFPQPDDVTGDKDAPDLRWGEVLRSEKKCDSSNEMIAPLAEELPQAISHEEIRDEQSRDAECQELGERQ--GTSCITDVNTDGILIRNAPLDGSKQIVVPLSLRPRLLQLEHFPVIAGHPGVSKMYASMRRKFFWKAMYKDVEETVRHCTVCAKNRVNERKRTSFLKLFPADGPLEFVAMDILGPLPKTEHGNRFLLVITDRFSKLTRTVPLRTITAIVVAKAFCDAWVFSYGPPRYLLTDNGTQFNAKFFLAVCRELGIAKIFTTAYHPQTNGQVERFNRTIINSLRGYVERRQGDWDDYTAAITFGYNCRVHSSLHLAPFELILSRPPPNLSVETSPTGIEDTPTSAK--LRFLGKIRKLLPLAQQRLAESQARYKKNFDRSVKEKNNNVRPDSWVYLRRE-VHEVGRNP-KLDDQVDGPYRVVETDGRVFKLRIGDDDVPVSSDRI 937          
BLAST of Gchil3594.t1 vs. uniprot
Match: R7Q5U0_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5U0_CHOCR)

HSP 1 Score: 582 bits (1500), Expect = 1.450e-195
Identity = 315/610 (51.64%), Postives = 398/610 (65.25%), Query Frame = 0
Query:  199 GSRPISQPPYRAGPRTRQIEEENVSKMLEEGLIKAAQSAWASPVVLGPKPDGSLRFCIDYRKLNAVTVRDTYPLPRMDEFVDSLGEANVFTTLDANSGYWQFAGTVQYLGHVIKPGQHAIQEAQTAALREVQPPSTQKQLRSFLGLCNVYRRFVPQYSHIAAPLNSKLRKGQPVQLDQFRQAEVEAFDTPKTKIITAPVLALPIPNLPYSVDTDSSEYQVGCALFQTHPDGERKPIGYWSRSLNAAEKKYSVSEKECLAVVWALTTLRPYLQGERFTVNTDHSSLRWLLSITDPSGRLTRWRLRLSEFDFEVKYKKGLADVQADALSRLKTLGETQGEIDEEIPCFYTETHSPPFEEEE--QKTLDDYLDADPFLALADTEPSVQLERILCTELLNEQQADAFCASIRSRLNGGEELHFSLDSRRIMLRHVEKHDQIVIPHVFKSRIHHPAHYSRLSGHLGRTKLFMTLRRYFYWRTLAMDCHATVSLCTACAKNRVRLYRKRKSMTLFQAKAPLQYVSIDILGELIRSRRGYRYLLVITDRFSKLVRTVPLKRITAAVITQAFIKLWVFIYGPPKVLLSDNGKQFVAKFFQNVCRIMGIRNVFTTTYHP 806
            G+RPI+Q PYRAGP  R+ E + V +ML  G+I+ +++AWASPVVL                                     L + + FT              V YLGHVI+PG  +I E  T ALRE+  P+TQ +LRSFLGLCNVYRRFVP Y+H AAPLN  L+KGQP +L+ F + E++AFDT +  +I+ P+LALP    PYS+DTD+S+YQVG ALFQ+H DG+RK IG+WSR L+AAE+ YS SEKECLAVVW + TLRPYLQG RFTV+T+HSSLRWL+ ITDPSGRL RWRLRL EFDF+VKYKKG  + QADALSRL T GET   +DEEIPCF        F E E   K  DD+ D +          S + + IL  E  +  +      +    L GG           +++R+V    Q+V P  F++RI +  H++ L+GH    K+F TL R  YW +LA+DC+ T   C  CAK RV+L RK K + LF A APL+ +SID+LGELIR+ RG R+LLVITDRFS+LVRTVPLKRITAA I +AF+  WVF+YGPP  +L+DNGKQFV++ FQ +CRI+GI+NVFTTTYHP
Sbjct:    3 GTRPIAQNPYRAGPHAREAEMKKVDRMLPAGVIEPSKTAWASPVVL-------------------------------------LEKCSFFTQ------------EVHYLGHVIRPGTLSIDEVSTRALREIAIPTTQTELRSFLGLCNVYRRFVPNYAHKAAPLNQLLKKGQPAKLEPFDETEIKAFDTLREAVISPPILALPKAGFPYSMDTDASDYQVGTALFQSHEDGQRKHIGFWSRLLHAAERNYSTSEKECLAVVWGVVTLRPYLQGTRFTVHTEHSSLRWLMEITDPSGRLMRWRLRLGEFDFDVKYKKGKLNTQADALSRLFTSGETTVPVDEEIPCFLGR-----FSEMEPVDKFSDDFEDLE----------SARFDAILTRERYSTDENLLDPITREEMLRGG-----------VLVRNVNATPQVVAPQDFQARILYMGHHALLAGHPRGRKMFYTLTRDCYWPSLAVDCYVTARNCIHCAKERVKLRRKTKRLKLFPATAPLKLLSIDLLGELIRTPRGIRWLLVITDRFSRLVRTVPLKRITAAEIAKAFVHHWVFVYGPPVTVLADNGKQFVSRLFQEICRILGIKNVFTTTYHP 537          
BLAST of Gchil3594.t1 vs. uniprot
Match: R7QLF2_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLF2_CHOCR)

HSP 1 Score: 588 bits (1516), Expect = 2.880e-193
Identity = 328/798 (41.10%), Postives = 463/798 (58.02%), Query Frame = 0
Query:  252 LRFCIDYRKLNAVTVRDTYPLPRMDEFVDSLGEANVF--TTLDANSGYWQFAG----------------------------------------TVQYLGHVIKPGQHAIQEAQTAALREVQPPSTQKQLRSFLGLCNVYRRFVPQYSHIAAPLNSKLRKGQPVQLDQFRQAEVEAFDTPKTKIITAPVLALPIPNLPYSVDTDSSEYQVGCALFQTHPDGERKPIGYWSRSLNAAEKKYSVSEKECLAVVWALTTLRPYLQGERFTVNTDHSSLRWLLSITDPSGRLTRWRLRLSEFDFEVKYKKGLADVQADALSRLKTLGETQGEIDEEIPCFYTETHSPPFEEEEQKTLDDYLDA-DPFLALADTEPSVQLERILCTELLNEQQADAFCASIRSRLNGGEELHFSLDSRRIMLRH--VEKHDQIVIPHVFKSRIHHPAHYSRLSGHLGRTKLFMTLRRYFYWRTLAMDCHATVSLCTACAKNRVRLYRKRKSMTLFQAKAPLQYVSIDILGELIRSRRGYRYLLVITDRFSKLVRTVPLKRITAAVITQAFIKLWVFIYGPPKVLLSDNGKQFVAKFFQNVCRIMGIRNVFTTTYHPQCNGHVERFNRTLIAALRHSIEDHPKEWDKFTDTLCYAYNTQMHSSIKTAPFDLVLSRNPPAL----AVLLDDKTGLDAP-TPAKYHLKWRNDLKPRAEEAAKELSKTQARYKRNYDARRRRRNTPVRVGGHVFV--------------RVERPDKQEESPHKLLPIAAGPFKVVDLNEDTVVIKTGEDVERVSGDGV 985
            ++FC+DYRKLNAVTVRD+YPLPRM E +DSLG+A     TT  ++SG ++F                                          +V YLGHVI+PGQ  ++     A+   + P+ Q +LRSFLG+CNVYR FV  ++ +AAPLN    K QP   +    AE  AF+  K ++++ P+LALP     Y++DTD+  +QVGCAL Q  PDG  +PIGYWSR+L  AE+ Y+  EKECLAVVW++ TLRPYL G  F + TDH ++RW+L++ D SGRL RWRLRL+E+++EV+Y+ G+    AD +SRL+T G     +D+E+ CF  ++         +   D   D  D F  LA T     +  I     L EQ  DAFC +    + G     F +D    ++R   ++   Q V+P+  + R+ + AH+ RL+GH G T+++ TLRR +YW  LA D  ATV  CT+ A  R  L++ +K + LF A  P+++V++D+LG L ++  G +++LVITDRFSKL  ++PL+  TA+V+  AF+  WV++YG P+ +L+DNG QF AKFF  VC ++G+R   TT YHPQ NG  ERFNRTL+  LRH +E+H ++WD +   L +AYNTQ+H S +T PFDLVL+R P  L     V  D  T ++ P TP +Y       L+   + A  +L+ +Q +YK N D + R R   VR G  V+V              RV+ P   E+   KLLP A GPF V    + TV+I+      RVS D V
Sbjct:    1 MQFCVDYRKLNAVTVRDSYPLPRMGECIDSLGDATDRDKTTFASHSGLYRFLRMPFALKNAPATFQRAVDIILSRVKWETALVYLDDCGFFDTSVTYLGHVIRPGQLEVERRNVIAIERARAPTNQTELRSFLGMCNVYRWFVQGFAKVAAPLNKNTGKNQPYDFEVLTDAEYAAFEELKRRLVSPPILALPRYGRKYTLDTDACGHQVGCALLQEQPDGGTRPIGYWSRALTNAERNYTTIEKECLAVVWSILTLRPYLYGSAFNLRTDHEAVRWVLNLADSSGRLARWRLRLAEYNYEVQYRPGVKHQLADGVSRLRTDGGDTTPVDDEVSCFVVQSQEGSASLLGKVHWDLTQDRPDGFYVLAVTPEERDVSSISVANFLREQADDAFCRAAADTV-GEPNSKFDVDRYGFLVRKSPLDGTLQRVVPNRLRPRVLYLAHHPRLAGHPGGTRMYYTLRREYYWPHLASDAFATVRNCTSWAATRGTLFKNQKDLRLFPAAGPMEFVAMDLLGPLPKTAHGNQHVLVITDRFSKLTHSIPLRTTTASVVASAFLDNWVYVYGAPRYMLTDNGPQFAAKFFDAVCALLGVRPYLTTAYHPQTNGQTERFNRTLVQRLRHYVEEHQRDWDDYVQPLTFAYNTQVHRSTETTPFDLVLTRPPTGLILPGTVPQDAGTHMEDPRTPVQYKRATLRKLRDALDRARTKLTASQKQYKDNLDRKVRFRPV-VRAGDFVYVDRPPRTLTSVERRMRVQSPTDTEDLSVKLLPKAEGPFNVRSATDTTVLIEQDSVENRVSIDRV 796          
BLAST of Gchil3594.t1 vs. uniprot
Match: R7QL13_CHOCR (Integrase catalytic domain-containing protein n=2 Tax=Chondrus crispus TaxID=2769 RepID=R7QL13_CHOCR)

HSP 1 Score: 566 bits (1460), Expect = 6.330e-190
Identity = 295/507 (58.19%), Postives = 364/507 (71.79%), Query Frame = 0
Query:  300 FAGTVQYLGHVIKPGQHAIQEAQTAALREVQPPSTQKQLRSFLGLCNVYRRFVPQYSHIAAPLNSKLRKGQPVQLDQFRQAEVEAFDTPKTKIITAPVLALPIPNLPYSVDTDSSEYQVGCALFQTHPDGERKPIGYWSRSLNAAEKKYSVSEKECLAVVWALTTLRPYLQGERFTVNTDHSSLRWLLSITDPSGRLTRWRLRLSEFDFEVKYKKGLADVQADALSRLKTLGETQGEIDEEIPCFYTETHSPPFEEEEQKTLDDYLDADPFLALADTEPSVQLERILCTELLNEQQADAFCASIRSRLNGGEELHFSLDSRRIMLRHVEKHDQIVIPHVFKSRIHHPAHYSRLSGHLGRTKLFMTLRRYFYWRTLAMDCHATVSLCTACAKNRVRLYRKRKSMTLFQAKAPLQYVSIDILGELIRSRRGYRYLLVITDRFSKLVRTVPLKRITAAVITQAFIKLWVFIYGPPKVLLSDNGKQFVAKFFQNVCRIMGIRNVFTTTYHP 806
            F   ++YLGHV++PG   +  A+TAAL +VQ P TQ QLRSFLGLCNVYRRFVP Y+ IA PLN  L+KGQPVQL+ F +   +AF   K  I+  PVLALP  +LPYSVDTD+S+YQ+G ALFQTHPD +RKPIG++S++L AAE+ YSVSEKECLAV+WA+ TLRPYL GE F V+TDH+SLRWL+++TDPSGRL RWRLRL EFDFE+KYKKG A+ QADALSRL+T GET  EID EIPCF  E      E+EE         AD  LAL         E     + L++ QA      +R+     EEL  +L       R   +  Q+VIP   + R+   +HY++L+GH G  KL+ TLRRYFYW T+A+DC+A    C ACA+ RV+  +  K M LF  KAPL++V+IDILGELI ++RG RY+LVI+DR+SKLVRTVPLK+I+AA I QAF+  WVF+YGPP  LLSDNG QF A+FFQNVCRI+GIRNVFTTTYHP
Sbjct:   33 FVEKIKYLGHVVRPGTLEVDVARTAALEQVQYPRTQTQLRSFLGLCNVYRRFVPHYAKIARPLNQLLKKGQPVQLEGFDEPCKKAFHKLKDAILAPPVLALPKKDLPYSVDTDASDYQIGAALFQTHPDAQRKPIGFFSKTLAAAERNYSVSEKECLAVIWAVQTLRPYLYGEHFVVHTDHASLRWLMNVTDPSGRLIRWRLRLPEFDFEIKYKKGKANSQADALSRLRTAGETVDEIDNEIPCFTAEPAEGTVEDEESIDA-----ADDILAL---------EGGTAPDRLDQFQA------VRTFSTETEELEGTL------CRTAVEFVQVVIPQSLRDRVLGLSHYAKLAGHPGGRKLYKTLRRYFYWPTMALDCYAVAKNCAACARERVKFRKNTKEMKLFTPKAPLEFVAIDILGELITTKRGNRYILVISDRYSKLVRTVPLKKISAAHIAQAFVHHWVFVYGPPFKLLSDNGTQFTARFFQNVCRILGIRNVFTTTYHP 513          
BLAST of Gchil3594.t1 vs. uniprot
Match: R7Q800_CHOCR (Integrase catalytic domain-containing protein n=2 Tax=Chondrus crispus TaxID=2769 RepID=R7Q800_CHOCR)

HSP 1 Score: 573 bits (1478), Expect = 4.560e-189
Identity = 317/690 (45.94%), Postives = 413/690 (59.86%), Query Frame = 0
Query:  300 FAGTVQYLGHVIKPGQHAIQEAQTAALREVQPPSTQKQLRSFLGLCNVYRRFVPQYSHIAAPLNSKLRKGQPVQLDQFRQAEVEAFDTPKTKIITAPVLALPIPNLPYSVDTDSSEYQVGCALFQTHPDGERKPIGYWSRSLNAAEKKYSVSEKECLAVVWALTTLRPYLQGERFTVNTDHSSLRWLLSITDPSGRLTRWRLRLSEFDFEVKYKKGLADVQADALSRLKTLGETQGEIDEEIPCFYTETHSPPFEEEEQKTLDDYLDADPFLALADTEPSVQLERILCTELLNEQQADAFCASIRSRLNGGEELHFSLDSRRI---MLRHVEKHDQIVIPHVFKSRIHHPAHYSRLSGHLGRTKLFMTLRRYFYWRTLAMDCHATVSLCTACAKNRVRLYRKRKSMTLFQAKAPLQYVSIDILGELIRSRRGYRYLLVITDRFSKLVRTVPLKRITAAVITQAFIKLWVFIYGPPKVLLSDNGKQFVAKFFQNVCRIMGIRNVFTTTYHPQCNGHVERFNRTLIAALRHSIEDHPKEWDKFTDTLCYAYNTQMHSSIKTAPFDLVLSRNPPALAVLLDDKTGLDAPTPAK-YHLKWRNDLKPRAEEAAKELSKTQARYKRNYDARRRRRNTPVRVGGHVFVRVERPDKQEESPHKLLPIAAGPFKVVDLNEDTVVIKTGEDVERVSGDGV 985
            F   ++YLGHV++PG   +  A+T AL +V  P TQ QLRSFL LC VYRRFVP Y+ IA PLN  L+KGQPV                                          +YQ+  ALFQTH D +RKPIG++SR+L AAE+ YSVSEKECLAV+WA+ TLRPYL GE F V+T H+SLRWL+++TDPSGRL RWRLRLSEFDFE+KYKKG A+ QADALSRL+T GET  EID+EIPCF  E                                   E +   EL+ EQ  D FC  I+  ++ G+   FS+ +  +   + R   +  Q+VIP   + R+   +HY++L+GH G  KL+ TLRRYFYW T+A DC+A    C ACA+ R                             LI ++RG +Y+LVI+DR+SKLVRTVPLK+I+AA I QAF+  WVF+YGPP  LLSD G QF  +FFQNVCRI+GIRNVFTTTYHPQ +G VERFN TL +AL+  + +HPK+WD F+D +  AYNTQ+H +   APF+LVL+R P ++A  L  +  L+  +  + Y+LKW++ L+   + A + L K QARYKRN+DAR  +    +    +VF+R E+    E   HKL  +A GP+ V   ++  VVI  G+  E V  D V
Sbjct:   54 FVEKIKYLGHVVRPGTLEVDAARTVALEQVPYPQTQTQLRSFLELCGVYRRFVPHYAKIAHPLNQLLKKGQPVH-----------------------------------------DYQISAALFQTHSDAQRKPIGFFSRTLTAAERNYSVSEKECLAVIWAVQTLRPYLYGEHFIVHTGHASLRWLMNVTDPSGRLIRWRLRLSEFDFEIKYKKGKANSQADALSRLRTAGETVEEIDDEIPCFMAEP---------------------------------AEAVTPEELIREQAVDPFCNRIKEEMDAGKVRTFSMKTEELEGTLCRTAAEFVQVVIPQSLRDRVLGLSHYAKLAGHPGGRKLYKTLRRYFYWPTMASDCYAVAKNCAACARER-----------------------------LITTKRGNQYILVISDRYSKLVRTVPLKKISAAHIAQAFVHYWVFVYGPPVKLLSDIGTQFTTRFFQNVCRILGIRNVFTTTYHPQASGQVERFNHTLTSALQKYVGEHPKDWDLFSDAVTLAYNTQVHRTTNMAPFELVLARAPRSIA--LQAQPSLEGFSSNRAYYLKWQSWLESLMKGADRSLRKEQARYKRNFDARLCKPQYEIPPWSYVFLRKEQGTASEPK-HKLAQVATGPYHVQRSDQHMVVIAIGDQEESVLRDRV 637          
BLAST of Gchil3594.t1 vs. uniprot
Match: R7Q4V7_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4V7_CHOCR)

HSP 1 Score: 559 bits (1440), Expect = 2.990e-185
Identity = 292/575 (50.78%), Postives = 380/575 (66.09%), Query Frame = 0
Query:  300 FAGTVQYLGHVIKPGQHAIQEAQTAALREVQPPSTQKQLRSFLGLCNVYRRFVPQYSHIAAPLNSKLRKGQPVQLDQFRQAEVEAFDTPKTKIITAPVLALPIPNLPYSVDTDSSEYQVGCALFQTHPDGERKPIGYWSRSLNAAEKKYSVSEKECLAVVWALTTLRPYLQGERFTVNTDHSSLRWLLSITDPSGRLTRWRLRLSEFDFEVKYKKGLADVQADALSRLKTLGETQGEIDEEIPCFYTETHSPPFEEEEQKTLDDYLDADPFLALADTEPSVQLERILCTELLNEQQADAFCASIRSRLNGGEELHFSLDSRRI---MLRHVEKHDQIVIPHVFKSRIHHPAHYSRLSGHLGRTKLFMTLRRYFYWRTLAMDCHATVSLCTACAKNRVRLYRKRKSMTLFQAKAPLQYVSIDILGELIRSRRGYRYLLVITDRFSKLVRTVPLKRITAAVITQAFIKLWVFIYGPPKVLLSDNGKQFVAKFFQNVCRIMGIRNVFTTTYHPQCNGHVERFNRTLIAALRHSIEDHPKEWDKFTDTLCYAYNTQMHSSIKTAPFDLVLSRNPPALAV 871
            F   ++YLGHV++PG   +  A+ AAL +V+ P TQ QLRSFLGLCNVYR+FVP Y+ IA PLN  L+KGQPV+++ F +   ++F   K  I+  PVLALP  +LPYS                                     + YSVSEKECLAV+WA+ TLRPYL GE F V+TDH+SLRWL+++TDPSGRL RWRLRLSEFDF++KYKKG A+ QADALSRL+T GET                     E+    LDD L  +   A    +   Q + +   EL+ EQ  D FC  I+  ++ G+   FS+++  +   + R   +  Q+VIP   + R+   +HY++L+GH G  KL+ TLRRYFYW T+A+DC+A    C ACA+ RV+L R  K M LF  KAPL++V+IDILGELI ++RG RY+LVI+DR+SKLVRTVPLK+I+AA I Q F+  WVF+YGPP  LLSDNG QF A+FFQNVCRI+GIRNVFTTTYHPQ NG VERFNRTL +ALR  + +HPK+WD F+D + +AYNTQ+H +   APF+LVL+R P ++A+
Sbjct:   43 FVEKIKYLGHVVRPGTLEVDAARIAALEQVRYPQTQTQLRSFLGLCNVYRQFVPHYAKIAHPLNQLLKKGQPVRMEGFDEPCEKSFHKLKGAILAPPVLALPKKDLPYS-------------------------------------RNYSVSEKECLAVIWAVQTLRPYLYGEHFIVHTDHASLRWLMNVTDPSGRLIRWRLRLSEFDFKIKYKKGKANSQADALSRLRTAGETN--------------------EDRFDALDDILALEGGTA---PDRFDQFQAVTPEELIREQAVDPFCNCIKEEMDAGKVRTFSMETEELEGTLCRTAAEFVQVVIPQSVRDRVLGLSHYAKLAGHPGGRKLYKTLRRYFYWPTMALDCYAVAKNCAACARERVKLRRNTKEMKLFTPKAPLEFVAIDILGELIITKRGNRYILVISDRYSKLVRTVPLKKISAAHIAQVFVHHWVFVYGPPVKLLSDNGTQFTARFFQNVCRILGIRNVFTTTYHPQANGQVERFNRTLTSALRKYVGEHPKDWDLFSDAVTFAYNTQVHRTTNIAPFELVLARAPRSIAL 557          
BLAST of Gchil3594.t1 vs. uniprot
Match: R7QN04_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QN04_CHOCR)

HSP 1 Score: 553 bits (1424), Expect = 1.300e-180
Identity = 301/709 (42.45%), Postives = 425/709 (59.94%), Query Frame = 0
Query:  300 FAGTVQYLGHVIKPGQHAIQEAQTAALREVQPPSTQKQLRSFLGLCNVYRRFVPQYSHIAAPLNSKLRKGQPVQLDQFRQAEVEAFDTPKTKIITAPVLALPIPNLPYSVDTDSSEYQVGCALFQTHPDGERKPIGYWSRSLNAAEKKYSVSEKECLAVVWALTTLRPYLQGERFTVNTDHSSLRWLLSITDPSGRLTRWRLRLSEFDFEVKYKKGLADVQADALSRLKTLGETQGEIDEEIPCFYTETHSPPFEEEEQKTLDDYLDADPFLALADTEPSVQLERILCTELLNEQQADAFCASIRSRLNGGEELHFSLDSRRIMLRH--VEKHDQIVIPHVFKSRIHHPAHYSRLSGHLGRTKLFMTLRRYFYWRTLAMDCHATVSLCTACAKNRVRLYRKRKSMTLFQAKAPLQYVSIDILGELIRSRRGYRYLLVITDRFSKLVRTVPLKRITAAVITQAFIKLWVFIYGPPKVLLSDNGKQFVAKFFQNVCRIMGIRNVFTTTYHPQCNGHVERFNRTLIAALRHSIEDHPKEWDKFTDTLCYAYNTQMHSSIKTAPFDLVLSRNPPAL----AVLLDDKTGLDAP-TPAKYHLKWRNDLKPRAEEAAKELSKTQARYKRNYDARRRRRNTPVRVGGHVFVRVERPDKQ----------------EESPHKLLPIAAGPFKVVDLNEDTVVIKTGEDVERVSGDGV 985
            F  +V YLGHVI+PG+  ++     A+   + P+ Q +LRSFLG+CNVYRRFV  ++ IA PLN K  K QP + +    AE  AF+  K ++++ P+LALP     Y++DTD+  +QVGCAL Q  PDG  +PIGYWSR+L  AE+ Y+ +EKECLAVVW++ TLRPYL G  F + TDH +LRW+L++ D SGRL RWRLRL+E+D+EV+Y+ G+    AD +SRL+T G     +D+E+PCF  +     +EE  +  LD+                         E L EQ  DAFC      + G     F +D    ++R   ++   Q V+P   + R+ + AH+ RL+GH G T+++ TLRR +YW  +A D  +TV  CT+CA  R  L + +K + LF A  PL++V++D+LG L ++  G +++LVITDRFSKL R++PL+  TA+V+  AF+  WV++YG P+ +L+DNG QF AKFF  VC ++G+R+  TT YHPQ NG  ERFNRTL+  LRH +E+H ++WD +   L +AYNTQ+H S +T PFDLVL+R P  L     V  D  T  + P TP +Y       L+   + A  +LS +Q RYK ++D + R R  PV V G  FV V+RP +                 +E   KLLP   GPF+V    + TV+I+      RVS D V
Sbjct:   26 FDTSVTYLGHVIRPGRLEVERRNVIAIERARAPTNQTELRSFLGMCNVYRRFVQGFAKIATPLNKKTGKNQPYEFEILTDAEYAAFEELKRRLVSPPILALPRYGRKYTLDTDACGHQVGCALLQEQPDGGTRPIGYWSRALTDAERNYTTTEKECLAVVWSILTLRPYLYGSAFNLRTDHEALRWVLNLADSSGRLARWRLRLAEYDYEVQYRPGVKHQLADGVSRLRTDGGDTEPVDDEVPCFAVQ-----YEEGSEALLDN-------------------------EFLREQAEDAFCRFAAETV-GTPNSKFDIDRYGFLVRTSPLDGTLQRVVPTRLRPRVLYLAHHPRLAGHSGATRMYYTLRREYYWPHMASDALSTVRNCTSCAATRGTLVKNQKDLKLFPAAGPLEFVAMDLLGPLPKTAHGNQHVLVITDRFSKLTRSIPLRTTTASVVANAFLDNWVYVYGAPRYVLTDNGPQFAAKFFDAVCALLGVRHYLTTAYHPQSNGQTERFNRTLVQRLRHYVEEHQRDWDDYVQPLTFAYNTQVHRSTETTPFDLVLTRPPSGLILPGTVPQDAGTHREDPRTPVQYKRATLRKLRDALDRARTKLSASQKRYKDDFDKKVRFR--PVVVAGD-FVYVDRPPRPLTSVERRTRAQGTTGTDELSVKLLPKTEGPFRVRSATDTTVLIEQDGVENRVSIDRV 700          
The following BLAST results are available for this feature:
BLAST of Gchil3594.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QG36_CHOCR9.450e-24054.12Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QFB9_CHOCR2.500e-22050.72Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QJ39_CHOCR5.740e-21150.00Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
UPI001E1E14077.400e-19637.92uncharacterized protein LOC123543642 n=1 Tax=Merce... [more]
R7Q5U0_CHOCR1.450e-19551.64Integrase catalytic domain-containing protein n=1 ... [more]
R7QLF2_CHOCR2.880e-19341.10Integrase catalytic domain-containing protein n=1 ... [more]
R7QL13_CHOCR6.330e-19058.19Integrase catalytic domain-containing protein n=2 ... [more]
R7Q800_CHOCR4.560e-18945.94Integrase catalytic domain-containing protein n=2 ... [more]
R7Q4V7_CHOCR2.990e-18550.78Integrase catalytic domain-containing protein n=1 ... [more]
R7QN04_CHOCR1.300e-18042.45Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 708..806
e-value: 1.4E-12
score: 47.7
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 706..865
score: 28.161938
IPR041588Integrase zinc-binding domainPFAMPF17921Integrase_H2C2coord: 635..693
e-value: 2.3E-9
score: 37.2
NoneNo IPR availableGENE3D3.10.20.370coord: 407..477
e-value: 3.3E-5
score: 25.8
NoneNo IPR availableGENE3D3.10.10.10HIV Type 1 Reverse Transcriptase, subunit A, domain 1coord: 191..301
e-value: 1.6E-36
score: 127.6
NoneNo IPR availableGENE3D1.10.340.70coord: 605..691
e-value: 9.8E-11
score: 43.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 132..146
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 129..148
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availablePANTHERPTHR34072ENZYMATIC POLYPROTEIN-RELATEDcoord: 302..531
coord: 184..299
coord: 615..971
NoneNo IPR availableCDDcd01647RT_LTRcoord: 229..299
e-value: 9.83297E-28
score: 108.837
NoneNo IPR availableCDDcd09274RNase_HI_RT_Ty3coord: 409..527
e-value: 6.23987E-55
score: 184.233
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 322..406
e-value: 4.3E-20
score: 73.5
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 270..297
e-value: 1.6E-36
score: 127.6
IPR041373Reverse transcriptase, RNase H-like domainPFAMPF17917RT_RNaseHcoord: 403..506
e-value: 3.1E-33
score: 114.2
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 703..912
e-value: 2.2E-50
score: 172.7
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 176..513
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 704..861

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004378_piloncontigtig00004378_pilon:1702265..1705504 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3594.t1Gchil3594.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004378_pilon 1702265..1705504 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil3594.t1 ID=Gchil3594.t1|Name=Gchil3594.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=986bp
MRRCPDAPPLPTSMEYGKSRGRVSPRIRGAGSAMLKAQTQNLVQVRTGRH
GLVVIQRNTRMYESRELLVANGIVQVDPGSPFWILVSNFTDNDYQILKIQ
VVVTALPHPTVVVPTHISTADVLGLTHVGDTDEELQTPSGDQLQTAKDPE
SLVDDLDLAHVSEHYRTKIRSMLKKYTSMWSGKLGEISATEHHIDLVPGS
RPISQPPYRAGPRTRQIEEENVSKMLEEGLIKAAQSAWASPVVLGPKPDG
SLRFCIDYRKLNAVTVRDTYPLPRMDEFVDSLGEANVFTTLDANSGYWQF
AGTVQYLGHVIKPGQHAIQEAQTAALREVQPPSTQKQLRSFLGLCNVYRR
FVPQYSHIAAPLNSKLRKGQPVQLDQFRQAEVEAFDTPKTKIITAPVLAL
PIPNLPYSVDTDSSEYQVGCALFQTHPDGERKPIGYWSRSLNAAEKKYSV
SEKECLAVVWALTTLRPYLQGERFTVNTDHSSLRWLLSITDPSGRLTRWR
LRLSEFDFEVKYKKGLADVQADALSRLKTLGETQGEIDEEIPCFYTETHS
PPFEEEEQKTLDDYLDADPFLALADTEPSVQLERILCTELLNEQQADAFC
ASIRSRLNGGEELHFSLDSRRIMLRHVEKHDQIVIPHVFKSRIHHPAHYS
RLSGHLGRTKLFMTLRRYFYWRTLAMDCHATVSLCTACAKNRVRLYRKRK
SMTLFQAKAPLQYVSIDILGELIRSRRGYRYLLVITDRFSKLVRTVPLKR
ITAAVITQAFIKLWVFIYGPPKVLLSDNGKQFVAKFFQNVCRIMGIRNVF
TTTYHPQCNGHVERFNRTLIAALRHSIEDHPKEWDKFTDTLCYAYNTQMH
SSIKTAPFDLVLSRNPPALAVLLDDKTGLDAPTPAKYHLKWRNDLKPRAE
EAAKELSKTQARYKRNYDARRRRRNTPVRVGGHVFVRVERPDKQEESPHK
LLPIAAGPFKVVDLNEDTVVIKTGEDVERVSGDGV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001584Integrase_cat-core
IPR041588Integrase_H2C2
IPR043128Rev_trsase/Diguanyl_cyclase
IPR041373RT_RNaseH
IPR036397RNaseH_sf
IPR043502DNA/RNA_pol_sf
IPR012337RNaseH-like_sf