Gchil3537.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil3537.t1
Unique Name	Gchil3537.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	409

Homology

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BLAST of Gchil3537.t1 vs. uniprot
Match: A0A2V3IXB0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXB0_9FLOR)

HSP 1 Score: 487 bits (1253), Expect = 1.400e-169
Identity = 236/345 (68.41%), Postives = 278/345 (80.58%), Query Frame = 0

Query:   65 LFAASQLSTNPYGFSARVRFCKITDPLRPSIPSRGSAGLKSTCPKFVSEATEYYPTGSCSNPNYWRTQRKKTLNKLDQLFLKNSEPQTVSAFKKFVATLLTDNVTFGSIGLLMLRGKEKTVDYLVSRQIAAGSHVPWSSNTPGGSRQGLVWARSNLVSYEKTYYDGDSFHARQTFVTFAPCSAKIKELYIAENSLFSAIGAQFYYPDFPDAYTQFNIPVSKICDRIMQACGSKSPYKSKSDCMAFMKKLRRNGKAMCLNFNKARLSPRAAVGDTVACRITSSLMAVSNSEKYCPLLGKKAGGMCIPKMCPQGDYGNLFSIKNPRYIGSGGFSCD-STGECVEQWP 408
            +FAAS+L+TN YGFSARV  C IT P RPSIPSR S GLKSTCPK   EA E  P G C  P YWRTQR+KTL KLD + L+N+  +T++AF+ +V T+L DNV FGSIGL M  GKEKTVDYLVSRQ AAGS VPWSS   G  R G +W+RSNLVSYEK+Y+ GD + +   FVTFAPCSAKI+ELYIAENSLFSA+G+Q+YYPD+PDAY+QFNIP + IC RI  ACG+KSPYKSKS+C+AFMK LR++GKAMC+N+N+ RLSPRAAVG+TVACRIT+SLMA+SN  KYCPLLGK  GGMC  KMCP  DYGNLF++KNPRY G+G FSC+  +GEC E WP
Sbjct:    1 MFAASRLATNSYGFSARVSACNITTPFRPSIPSRDSPGLKSTCPKVGWEAMEKGPNGVCKAPKYWRTQREKTLKKLDTMHLQNANRKTINAFRNWVGTMLVDNVAFGSIGLFMTHGKEKTVDYLVSRQAAAGSFVPWSSIRKG-RRNGFMWSRSNLVSYEKSYFVGDHYLSLFMFVTFAPCSAKIEELYIAENSLFSALGSQYYYPDYPDAYSQFNIPAADICGRIEVACGNKSPYKSKSECVAFMKNLRKSGKAMCINYNRGRLSPRAAVGNTVACRITTSLMAMSNPNKYCPLLGKAPGGMCTNKMCPVPDYGNLFAVKNPRYEGTGDFSCNLKSGECKELWP 344

The following BLAST results are available for this feature:

BLAST of Gchil3537.t1 vs. uniprot

BLAST of Gchil3537.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IXB0_9FLOR	1.400e-169	68.41	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 20..408
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..3
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 15..19
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 4..14
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..19

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004378_pilon	contig	tig00004378_pilon:1083005..1084231 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil3537.t1	Gchil3537.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004378_pilon 1083005..1084231 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil3537.t1 ID=Gchil3537.t1|Name=Gchil3537.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=409bp
MIRLAPVFLLSLCAHLALAIPQNCGPSLSKLIEACGQPDKAQPDYCCVAL
REFNGKQCWCQPAALFAASQLSTNPYGFSARVRFCKITDPLRPSIPSRGS
AGLKSTCPKFVSEATEYYPTGSCSNPNYWRTQRKKTLNKLDQLFLKNSEP
QTVSAFKKFVATLLTDNVTFGSIGLLMLRGKEKTVDYLVSRQIAAGSHVP
WSSNTPGGSRQGLVWARSNLVSYEKTYYDGDSFHARQTFVTFAPCSAKIK
ELYIAENSLFSAIGAQFYYPDFPDAYTQFNIPVSKICDRIMQACGSKSPY
KSKSDCMAFMKKLRRNGKAMCLNFNKARLSPRAAVGDTVACRITSSLMAV
SNSEKYCPLLGKKAGGMCIPKMCPQGDYGNLFSIKNPRYIGSGGFSCDST
GECVEQWP*