Gchil3537.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil3537.t1
Unique NameGchil3537.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length409
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004378_piloncontigtig00004378_pilon:1083005..1084231 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3537Gchil3537Gracilaria chilensis NLEC103_M9 malegenetig00004378_pilon 1083005..1084231 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil3537.t1.stop1Gchil3537.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00004378_pilon 1083005..1083007 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil3537.t1.CDS1Gchil3537.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00004378_pilon 1083005..1084231 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil3537.t1.exon1Gchil3537.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00004378_pilon 1083005..1084231 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil3537.t1.start1Gchil3537.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00004378_pilon 1084229..1084231 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil3537.t1Gchil3537.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00004378_pilon 1083005..1084231 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil3537.t1 ID=Gchil3537.t1|Name=Gchil3537.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=409bp
MIRLAPVFLLSLCAHLALAIPQNCGPSLSKLIEACGQPDKAQPDYCCVAL
REFNGKQCWCQPAALFAASQLSTNPYGFSARVRFCKITDPLRPSIPSRGS
AGLKSTCPKFVSEATEYYPTGSCSNPNYWRTQRKKTLNKLDQLFLKNSEP
QTVSAFKKFVATLLTDNVTFGSIGLLMLRGKEKTVDYLVSRQIAAGSHVP
WSSNTPGGSRQGLVWARSNLVSYEKTYYDGDSFHARQTFVTFAPCSAKIK
ELYIAENSLFSAIGAQFYYPDFPDAYTQFNIPVSKICDRIMQACGSKSPY
KSKSDCMAFMKKLRRNGKAMCLNFNKARLSPRAAVGDTVACRITSSLMAV
SNSEKYCPLLGKKAGGMCIPKMCPQGDYGNLFSIKNPRYIGSGGFSCDST
GECVEQWP*
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spliced messenger RNA

>Gchil3537.t1 ID=Gchil3537.t1|Name=Gchil3537.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1227bp|location=Sequence derived from alignment at tig00004378_pilon:1083005..1084231- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGATACGCTTGGCTCCTGTCTTTCTGCTCAGTCTCTGTGCCCACCTTGC
CCTGGCCATACCGCAGAACTGCGGTCCATCGCTCTCAAAGCTTATCGAAG
CATGCGGACAACCAGACAAGGCACAGCCTGATTACTGTTGCGTGGCTCTC
CGGGAATTCAATGGCAAACAGTGCTGGTGCCAACCAGCGGCCTTGTTCGC
GGCCTCACAGCTCTCAACCAATCCGTACGGCTTTTCAGCACGAGTCCGAT
TCTGTAAAATTACTGATCCCTTACGTCCGTCCATACCATCGAGAGGTTCT
GCTGGATTGAAATCTACGTGCCCCAAATTCGTCTCGGAGGCGACCGAATA
CTATCCGACGGGTTCATGCTCAAACCCCAATTACTGGAGAACCCAGAGAA
AGAAAACGTTGAACAAACTCGATCAACTCTTTCTGAAGAACTCCGAACCA
CAGACTGTGTCCGCTTTCAAGAAGTTCGTCGCCACCTTGTTGACGGACAA
TGTGACTTTTGGAAGCATCGGCCTTCTCATGCTCCGTGGAAAGGAAAAGA
CAGTGGATTATCTGGTGTCCCGCCAAATTGCAGCTGGTTCACATGTTCCA
TGGAGTTCAAACACTCCTGGTGGCAGTCGCCAAGGCTTAGTTTGGGCTCG
GTCCAATCTGGTAAGCTACGAAAAGACCTATTATGACGGAGACTCATTCC
ATGCGCGTCAGACCTTCGTGACATTTGCTCCATGTTCAGCGAAAATTAAG
GAACTATATATTGCCGAAAACTCACTGTTCAGCGCCATAGGAGCCCAGTT
TTATTATCCAGACTTTCCTGACGCCTACACGCAGTTCAACATTCCCGTTT
CCAAAATCTGCGACAGAATTATGCAAGCTTGTGGAAGTAAGTCACCGTAT
AAGTCAAAGTCTGACTGTATGGCTTTCATGAAGAAGCTCAGAAGGAACGG
CAAGGCCATGTGTCTCAATTTCAATAAAGCCCGTCTCTCACCCCGAGCTG
CAGTCGGAGACACCGTGGCGTGTCGTATCACATCGAGTTTGATGGCCGTC
AGTAATTCGGAGAAGTACTGTCCGCTGCTTGGAAAGAAGGCGGGTGGAAT
GTGTATCCCGAAAATGTGCCCTCAAGGTGACTACGGCAATCTGTTCTCTA
TCAAGAACCCGCGATACATTGGTTCTGGAGGATTTTCCTGTGACTCAACT
GGTGAATGTGTGGAGCAATGGCCTTGA
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protein sequence of Gchil3537.t1

>Gchil3537.t1 ID=Gchil3537.t1|Name=Gchil3537.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=409bp
MIRLAPVFLLSLCAHLALAIPQNCGPSLSKLIEACGQPDKAQPDYCCVAL
REFNGKQCWCQPAALFAASQLSTNPYGFSARVRFCKITDPLRPSIPSRGS
AGLKSTCPKFVSEATEYYPTGSCSNPNYWRTQRKKTLNKLDQLFLKNSEP
QTVSAFKKFVATLLTDNVTFGSIGLLMLRGKEKTVDYLVSRQIAAGSHVP
WSSNTPGGSRQGLVWARSNLVSYEKTYYDGDSFHARQTFVTFAPCSAKIK
ELYIAENSLFSAIGAQFYYPDFPDAYTQFNIPVSKICDRIMQACGSKSPY
KSKSDCMAFMKKLRRNGKAMCLNFNKARLSPRAAVGDTVACRITSSLMAV
SNSEKYCPLLGKKAGGMCIPKMCPQGDYGNLFSIKNPRYIGSGGFSCDST
GECVEQWP*
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mRNA from alignment at tig00004378_pilon:1083005..1084231-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil3537.t1 ID=Gchil3537.t1|Name=Gchil3537.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1227bp|location=Sequence derived from alignment at tig00004378_pilon:1083005..1084231- (Gracilaria chilensis NLEC103_M9 male)
ATGATACGCTTGGCTCCTGTCTTTCTGCTCAGTCTCTGTGCCCACCTTGC
CCTGGCCATACCGCAGAACTGCGGTCCATCGCTCTCAAAGCTTATCGAAG
CATGCGGACAACCAGACAAGGCACAGCCTGATTACTGTTGCGTGGCTCTC
CGGGAATTCAATGGCAAACAGTGCTGGTGCCAACCAGCGGCCTTGTTCGC
GGCCTCACAGCTCTCAACCAATCCGTACGGCTTTTCAGCACGAGTCCGAT
TCTGTAAAATTACTGATCCCTTACGTCCGTCCATACCATCGAGAGGTTCT
GCTGGATTGAAATCTACGTGCCCCAAATTCGTCTCGGAGGCGACCGAATA
CTATCCGACGGGTTCATGCTCAAACCCCAATTACTGGAGAACCCAGAGAA
AGAAAACGTTGAACAAACTCGATCAACTCTTTCTGAAGAACTCCGAACCA
CAGACTGTGTCCGCTTTCAAGAAGTTCGTCGCCACCTTGTTGACGGACAA
TGTGACTTTTGGAAGCATCGGCCTTCTCATGCTCCGTGGAAAGGAAAAGA
CAGTGGATTATCTGGTGTCCCGCCAAATTGCAGCTGGTTCACATGTTCCA
TGGAGTTCAAACACTCCTGGTGGCAGTCGCCAAGGCTTAGTTTGGGCTCG
GTCCAATCTGGTAAGCTACGAAAAGACCTATTATGACGGAGACTCATTCC
ATGCGCGTCAGACCTTCGTGACATTTGCTCCATGTTCAGCGAAAATTAAG
GAACTATATATTGCCGAAAACTCACTGTTCAGCGCCATAGGAGCCCAGTT
TTATTATCCAGACTTTCCTGACGCCTACACGCAGTTCAACATTCCCGTTT
CCAAAATCTGCGACAGAATTATGCAAGCTTGTGGAAGTAAGTCACCGTAT
AAGTCAAAGTCTGACTGTATGGCTTTCATGAAGAAGCTCAGAAGGAACGG
CAAGGCCATGTGTCTCAATTTCAATAAAGCCCGTCTCTCACCCCGAGCTG
CAGTCGGAGACACCGTGGCGTGTCGTATCACATCGAGTTTGATGGCCGTC
AGTAATTCGGAGAAGTACTGTCCGCTGCTTGGAAAGAAGGCGGGTGGAAT
GTGTATCCCGAAAATGTGCCCTCAAGGTGACTACGGCAATCTGTTCTCTA
TCAAGAACCCGCGATACATTGGTTCTGGAGGATTTTCCTGTGACTCAACT
GGTGAATGTGTGGAGCAATGGCCTTGA
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Coding sequence (CDS) from alignment at tig00004378_pilon:1083005..1084231-

>Gchil3537.t1 ID=Gchil3537.t1|Name=Gchil3537.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1227bp|location=Sequence derived from alignment at tig00004378_pilon:1083005..1084231- (Gracilaria chilensis NLEC103_M9 male)
ATGATACGCTTGGCTCCTGTCTTTCTGCTCAGTCTCTGTGCCCACCTTGC
CCTGGCCATACCGCAGAACTGCGGTCCATCGCTCTCAAAGCTTATCGAAG
CATGCGGACAACCAGACAAGGCACAGCCTGATTACTGTTGCGTGGCTCTC
CGGGAATTCAATGGCAAACAGTGCTGGTGCCAACCAGCGGCCTTGTTCGC
GGCCTCACAGCTCTCAACCAATCCGTACGGCTTTTCAGCACGAGTCCGAT
TCTGTAAAATTACTGATCCCTTACGTCCGTCCATACCATCGAGAGGTTCT
GCTGGATTGAAATCTACGTGCCCCAAATTCGTCTCGGAGGCGACCGAATA
CTATCCGACGGGTTCATGCTCAAACCCCAATTACTGGAGAACCCAGAGAA
AGAAAACGTTGAACAAACTCGATCAACTCTTTCTGAAGAACTCCGAACCA
CAGACTGTGTCCGCTTTCAAGAAGTTCGTCGCCACCTTGTTGACGGACAA
TGTGACTTTTGGAAGCATCGGCCTTCTCATGCTCCGTGGAAAGGAAAAGA
CAGTGGATTATCTGGTGTCCCGCCAAATTGCAGCTGGTTCACATGTTCCA
TGGAGTTCAAACACTCCTGGTGGCAGTCGCCAAGGCTTAGTTTGGGCTCG
GTCCAATCTGGTAAGCTACGAAAAGACCTATTATGACGGAGACTCATTCC
ATGCGCGTCAGACCTTCGTGACATTTGCTCCATGTTCAGCGAAAATTAAG
GAACTATATATTGCCGAAAACTCACTGTTCAGCGCCATAGGAGCCCAGTT
TTATTATCCAGACTTTCCTGACGCCTACACGCAGTTCAACATTCCCGTTT
CCAAAATCTGCGACAGAATTATGCAAGCTTGTGGAAGTAAGTCACCGTAT
AAGTCAAAGTCTGACTGTATGGCTTTCATGAAGAAGCTCAGAAGGAACGG
CAAGGCCATGTGTCTCAATTTCAATAAAGCCCGTCTCTCACCCCGAGCTG
CAGTCGGAGACACCGTGGCGTGTCGTATCACATCGAGTTTGATGGCCGTC
AGTAATTCGGAGAAGTACTGTCCGCTGCTTGGAAAGAAGGCGGGTGGAAT
GTGTATCCCGAAAATGTGCCCTCAAGGTGACTACGGCAATCTGTTCTCTA
TCAAGAACCCGCGATACATTGGTTCTGGAGGATTTTCCTGTGACTCAACT
GGTGAATGTGTGGAGCAATGGCCTTGA
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