Gchil6885.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6885.t1
Unique NameGchil6885.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length159
Homology
BLAST of Gchil6885.t1 vs. uniprot
Match: A0A2V3IRM2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRM2_9FLOR)

HSP 1 Score: 150 bits (380), Expect = 3.270e-44
Identity = 78/111 (70.27%), Postives = 91/111 (81.98%), Query Frame = 0
Query:   48 DSMIPDAMEDTLLQDIKSMRAKRMPGSESKPGSDSIYRVKSLIESILLWDFFLVLGLLGWLVVALVPHFVSKDDTLLDPWLALWQPFIQPVLGVLMLGTIVQGTISFISKN 158
            D+ IP A+EDTLLQDI+ MR KR   +E++    SI  +K+ IE+ILLWDFFLV+ LL WL VALVPHF SK+D LLDPWLALWQPFIQPVLGVLMLGTIVQGT+S+ISK 
Sbjct:   17 DAKIP-AVEDTLLQDIQRMRTKRKGATEAEAKKSSISPLKNAIETILLWDFFLVIALLVWLAVALVPHFASKNDFLLDPWLALWQPFIQPVLGVLMLGTIVQGTLSYISKK 126          
BLAST of Gchil6885.t1 vs. uniprot
Match: R7QS74_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QS74_CHOCR)

HSP 1 Score: 134 bits (337), Expect = 4.600e-37
Identity = 64/102 (62.75%), Postives = 81/102 (79.41%), Query Frame = 0
Query:   57 DTLLQDIKSMRAKRMPGSESKPGSDSIYRVKSLIESILLWDFFLVLGLLGWLVVALVPHFVSKDDTLLDPWLALWQPFIQPVLGVLMLGTIVQGTISFISKN 158
            D L  D++ +RAKR      K  +  +  VKS+++S+L+W+FFLVLGLLGWL +AL+PHF SK+D LLDPWLALWQPFIQPVLGVLMLGTIVQG+IS+I+  
Sbjct:   72 DLLKADVERIRAKRKNAPAQKVETAPMSTVKSVVDSVLIWNFFLVLGLLGWLGIALIPHFASKNDVLLDPWLALWQPFIQPVLGVLMLGTIVQGSISYINSK 173          
BLAST of Gchil6885.t1 vs. uniprot
Match: A0A1X6P8Z4_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P8Z4_PORUM)

HSP 1 Score: 90.9 bits (224), Expect = 1.460e-19
Identity = 50/113 (44.25%), Postives = 74/113 (65.49%), Query Frame = 0
Query:   53 DAMEDTLLQDIKSMRAK--RMPGSES----KPGSDS-IYRVKSLIESILLWDFFLVLGLLGWLVVALVPHFVSKDDTLLDPWLALWQPFIQPVLGVLMLGTIVQGTISFISKN 158
            +++E TL +D+   R +  R  G ++    +P ++S + RV   + ++L+ DFF+V   L WLVVALVPHF   ++ LLD WL+LW   IQP+LGVLMLGTIV GT+S++   
Sbjct:  109 ESVESTLARDLAGFRTRQRRREGKDAAAAVEPEAESTLARVGKTVNTLLVADFFVVCFFLAWLVVALVPHFAYHNEVLLDAWLSLWTLVIQPLLGVLMLGTIVAGTLSYVQSK 221          
BLAST of Gchil6885.t1 vs. uniprot
Match: A0A7S0ZB81_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZB81_9RHOD)

HSP 1 Score: 79.7 bits (195), Expect = 8.810e-16
Identity = 44/107 (41.12%), Postives = 64/107 (59.81%), Query Frame = 0
Query:   57 DTLLQDIKSMRAKRMPGSES-----KPGSDSIYRVKSLIESILLWDFFLVLGLLGWLVVALVPHFVSKDDTLLDPWLALWQPFIQPVLGVLMLGTIVQGTISFISKN 158
            D L  D++ MRA R   + S     +     + RV   ++ +L+ DFFLVL  L WL +A+V     +DD L   W +LWQP IQP+LG+LMLGTIV GT+ ++++ 
Sbjct:   70 DMLAADLELMRASRTSANSSSDVANRNNESMMKRVSDSLQLVLIVDFFLVLFFLLWLAIAVV----KQDDDLYTIWYSLWQPIIQPILGILMLGTIVTGTLRYVNQK 172          
BLAST of Gchil6885.t1 vs. uniprot
Match: A0A835ZDF1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDF1_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 2.110e-15
Identity = 43/97 (44.33%), Postives = 56/97 (57.73%), Query Frame = 0
Query:   57 DTLLQDIKSMRAKRMPGSESKPGSDSIYRVKSLIESILLWDFFLVLGLLGWLVVALVPHFVSKDDTLLDPWLALWQPFIQPVLGVLMLGTIVQGTIS 153
            D L  DI   + +           D+   +K++   IL  DFF+V+G LGWLVVA++   V KD +LLD + A W P IQP LGVLM GTI  GT+S
Sbjct:   72 DELGADIAKYKRREAAAGPKDSSLDAGATLKAIFSWILTADFFIVVGFLGWLVVAVIARSVLKDGSLLDGFSAAWAPIIQPALGVLMAGTIASGTVS 168          
BLAST of Gchil6885.t1 vs. uniprot
Match: A0A5J4YX53_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YX53_PORPP)

HSP 1 Score: 76.3 bits (186), Expect = 1.480e-14
Identity = 45/111 (40.54%), Postives = 60/111 (54.05%), Query Frame = 0
Query:   54 AMEDTLLQDIKSMRAKRMPGSESKPGSDSIYR-------VKSLIESILLWDFFLVLGLLGWLVVALVPHFVSKDDTLLDPWLALWQPFIQPVLGVLMLGTIVQGTISFISK 157
            ++EDTL +D+  ++AKR                        S ++++L+ DFF+VLG L WL VA+V +    DD L   W ALW P IQP LGVLMLGTIV G +    K
Sbjct:   54 SIEDTLAEDLARLKAKRAXXXXXXXXXXXXXXXXXXXXXAASFVQTVLVADFFVVLGFLAWLAVAVVKN----DDDLYSQWYALWTPLIQPALGVLMLGTIVSGVLGMGKK 160          
BLAST of Gchil6885.t1 vs. uniprot
Match: A0A7S1TMC3_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TMC3_9RHOD)

HSP 1 Score: 72.4 bits (176), Expect = 5.610e-13
Identity = 44/103 (42.72%), Postives = 62/103 (60.19%), Query Frame = 0
Query:   56 EDTLLQDIKSMRAKRMPGSESKPGSDSIYRVKSLIESILLWDFFLVLGLLGWLVVALVPHFVSKDDTLLDPWLALWQPFIQPVLGVLMLGTIVQGTISFISKN 158
            E+ L +D++ MR++R   + S   S + +   +L++ IL+ DFFLVLG L WL VA+V    S +D          +PFIQP LGVLMLGTIV G  S ++K 
Sbjct:   74 EEMLARDLEVMRSRRAAKAASTTDSKAGFDGGALLQKILIADFFLVLGFLAWLAVAVV----SGNDDWYSQXXXXXEPFIQPALGVLMLGTIVSGLTSAMNKK 172          
BLAST of Gchil6885.t1 vs. uniprot
Match: A9TXP5_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9TXP5_PHYPA)

HSP 1 Score: 72.0 bits (175), Expect = 1.930e-12
Identity = 40/86 (46.51%), Postives = 51/86 (59.30%), Query Frame = 0
Query:   74 SES-KPGSDSIYRVKSLIESILLWDFFLVLGLLGWLVVALVPHFVSKDDTLLDPWLALWQPFIQPVLGVLMLGTIVQGTISFISKN 158
            SES KP  D +  VKSL+E +L+ DFF +L +L WLV  L    + +  TL+D WL LW    QP LGV M G IV     F++KN
Sbjct:  136 SESGKPEGDGM--VKSLVEKVLVADFFFILFILAWLVAGLGEKSLLQSSTLIDSWLPLWPTLFQPALGVFMAGAIVSAASGFLAKN 219          
BLAST of Gchil6885.t1 vs. uniprot
Match: A0A1Y1IJR1_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IJR1_KLENI)

HSP 1 Score: 69.7 bits (169), Expect = 6.860e-12
Identity = 39/84 (46.43%), Postives = 53/84 (63.10%), Query Frame = 0
Query:   76 SKPGSDSIYRV-KSLIESILLWDFFLVLGLLGWLVVALVPHFVSKDDTLLDPWLALWQPFIQPVLGVLMLGTIVQGTISFISKN 158
            +K  SD+  R  KS+I++IL+ DFF ++ +L WL+  +V         LLD WL LW    QP +GVLM GTIV GTIS +S+N
Sbjct:   93 TKEFSDNATRATKSVIDTILVADFFFIILVLLWLIAGVVERQALDSTKLLDVWLPLWGTVFQPAIGVLMAGTIVSGTISTLSQN 176          
BLAST of Gchil6885.t1 vs. uniprot
Match: A0A7S1TBK9_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TBK9_9RHOD)

HSP 1 Score: 68.2 bits (165), Expect = 2.130e-11
Identity = 41/112 (36.61%), Postives = 62/112 (55.36%), Query Frame = 0
Query:   56 EDTLLQDIKSMRAK-RMPGSESKPGSDSIYRVKSLIESIL---LW-----DFFLVLGLLGWLVVALVPHFVSKDDTLLDPWLALWQPFIQPVLGVLMLGTIVQGTISFISKN 158
            E+ LL+DI+ M+ K R  G+  +   +   +V   + S L   LW     +F  VL  L WL VAL      ++D+L D W  +W   IQP LG+LMLGT++ GT+S +++ 
Sbjct:   55 EERLLEDIRRMKEKKRSAGARDEQDGEENEKVDQGLASALKNALWTAFGVNFAAVLFFLAWLAVALALRLGMREDSLFDAWYRIWPTVIQPSLGILMLGTVISGTLSNLNRR 166          
The following BLAST results are available for this feature:
BLAST of Gchil6885.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
A0A2V3IRM2_9FLOR3.270e-4470.27Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QS74_CHOCR4.600e-3762.75Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6P8Z4_PORUM1.460e-1944.25Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S0ZB81_9RHOD8.810e-1641.12Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A835ZDF1_9STRA2.110e-1544.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A5J4YX53_PORPP1.480e-1440.54Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A7S1TMC3_9RHOD5.610e-1342.72Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
A9TXP5_PHYPA1.930e-1246.51Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
A0A1Y1IJR1_KLENI6.860e-1246.43Uncharacterized protein n=1 Tax=Klebsormidium nite... [more]
A0A7S1TBK9_9RHOD2.130e-1136.61Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..53
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..47
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 156..158
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 115..133
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 93..114
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 134..155
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..92
NoneNo IPR availableTMHMMTMhelixcoord: 92..114
NoneNo IPR availableTMHMMTMhelixcoord: 134..156

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004376_piloncontigtig00004376_pilon:589935..590411 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6885.t1Gchil6885.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004376_pilon 589935..590411 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6885.t1 ID=Gchil6885.t1|Name=Gchil6885.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=159bp
MIGFVLSLPTKRLGSPNALYSRSQCCTTMRKGSDSENSSSQKRTSGRDSM
IPDAMEDTLLQDIKSMRAKRMPGSESKPGSDSIYRVKSLIESILLWDFFL
VLGLLGWLVVALVPHFVSKDDTLLDPWLALWQPFIQPVLGVLMLGTIVQG
TISFISKN*
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