Gchil6835.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6835.t1
Unique NameGchil6835.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length153
Homology
BLAST of Gchil6835.t1 vs. uniprot
Match: A0A2V3IXJ8_9FLOR (DNA replication complex GINS protein SLD5 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXJ8_9FLOR)

HSP 1 Score: 162 bits (410), Expect = 2.890e-47
Identity = 85/154 (55.19%), Postives = 109/154 (70.78%), Query Frame = 0
Query:    1 MSSYSDHGDEIPRFSFGSMALSQEQA--GHTQTRLPNALEGENPSQPGLNEAIDRMVMLARNEQFSPGILPHEFQTIQVIQALIKQQSDLVDDEDDTNANVSLESQLKRLEIDRINYTLRHYFRVRIKKIEENILFIFKNSSMLNDLSEAENSH 152
            MSS S H ++ PRFSFG+MALS+E +     Q+RL N    ++     LNEA+D M MLARNEQ+SP +LP + QT+ VI++L+ QQ D+VD ED+   N S+ESQLKRLE+DRINY LRHY+RVRI KIE NI FI KN+     LS+AE  +
Sbjct:    1 MSSDSQHDNDTPRFSFGAMALSEEPSRLARAQSRLQNVASIDDAPNTSLNEAVDIMRMLARNEQYSPELLPFQTQTVSVIRSLVSQQLDIVDQEDELEENTSIESQLKRLELDRINYLLRHYYRVRIAKIENNIFFISKNAEASELLSDAEEKY 154          
BLAST of Gchil6835.t1 vs. uniprot
Match: R7Q402_CHOCR (DNA replication complex GINS protein SLD5 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q402_CHOCR)

HSP 1 Score: 132 bits (333), Expect = 1.070e-35
Identity = 74/148 (50.00%), Postives = 105/148 (70.95%), Query Frame = 0
Query:    5 SDHGDEIPRFSFGSMALSQEQAGHTQTRLPNALEGENPSQPG--LNEAIDRMVMLARNEQFSPGILPHEFQTIQVIQALIKQQSDLVDDEDDTNAN-VSLESQLKRLEIDRINYTLRHYFRVRIKKIEENILFIFKNSSMLNDLSEAE 149
            S + D+ PRFSFGSMAL++E  G     + + L   +P Q G  LNE +D++  +A NE F P ILP E +TIQ + + +KQQ++LV++E+D + + +S ESQLKR+EIDRINY LRHY+R+RIKKIE ++LFIFK+ +    LS+ E
Sbjct:    3 STNNDDQPRFSFGSMALTEEP-GRGPLAIDSHLSHLDPDQLGGQLNETLDKLRTVAVNEYFCPEILPFETETIQAMSSEVKQQTELVEEEEDESVDALSFESQLKRMEIDRINYLLRHYYRMRIKKIEGSVLFIFKDLNTFELLSKHE 149          
BLAST of Gchil6835.t1 vs. uniprot
Match: A0A0L0D2U3_THETB (DNA replication complex GINS protein SLD5 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D2U3_THETB)

HSP 1 Score: 65.1 bits (157), Expect = 5.860e-10
Identity = 37/102 (36.27%), Postives = 60/102 (58.82%), Query Frame = 0
Query:   48 NEAIDRMVMLARNEQFSPGILPHEFQTIQVIQALIKQQSDLVDDEDDTNANVSLESQLKRLEIDRINYTLRHYFRVRIKKIEENILFIFKNSSMLNDLSEAE 149
            N  I+ +     NE+FSP +L  E   +  +   +K+Q D+V  E D  A  +  ++LK+LE++R+ Y LR Y+R R++KIE+  ++I KN  +   LS AE
Sbjct:   22 NNDIEALKQAWLNEKFSPHVLIFEDALVARVSEDVKEQEDVVAGELDDGA--TFMTRLKQLELERVKYLLRSYYRTRLRKIEKFCMYILKNPVVRTRLSPAE 121          
BLAST of Gchil6835.t1 vs. uniprot
Match: A0A024GPQ5_9STRA (DNA replication complex GINS protein SLD5 n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GPQ5_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 7.400e-10
Identity = 37/115 (32.17%), Postives = 63/115 (54.78%), Query Frame = 0
Query:   39 GENPSQPGLNEAIDRMVMLARNEQFSPGILPHEFQTIQVIQALIKQQSDLVDDEDDTNANVSLE----SQLKRLEIDRINYTLRHYFRVRIKKIEENILFIFKNSSMLNDLSEAE 149
            G+  +   +NE +++M+ L RNE  +P +L +    +  +   IK Q + +D   D    ++ E    ++L ++EIDR+ Y L  Y R R+KKIE+   +I K  + L+ LSE E
Sbjct:    2 GDQEATNDVNEDVEKMITLWRNELNAPDMLEYNNDLVAALLEQIKNQQEYIDSISDNRECLTEERSFTNKLYQMEIDRLRYMLASYLRTRLKKIEKYSQYIIKTPAYLDRLSEKE 116          
BLAST of Gchil6835.t1 vs. uniprot
Match: F0WP87_9STRA (DNA replication complex GINS protein SLD5 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WP87_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 7.460e-9
Identity = 38/107 (35.51%), Postives = 58/107 (54.21%), Query Frame = 0
Query:   47 LNEAIDRMVMLARNEQFSPGILPHEFQTIQVIQALIKQQSDLVDDEDDTNANVSLE----SQLKRLEIDRINYTLRHYFRVRIKKIEENILFIFKNSSMLNDLSEAE 149
            +NE I++M+ L RNE  +P IL +    +  +   IK Q   +D   D   N++ E    ++L ++EIDR+ Y L  Y R R++KIE     I K +  L+ LSE E
Sbjct:   10 INEDIEKMMTLWRNELNAPDILNYNNDLVVALLEQIKNQQGYIDSIGDDRGNLTEERSFTNKLYQMEIDRLRYVLASYLRTRLQKIERYSKHIVKTTVYLDRLSEKE 116          
BLAST of Gchil6835.t1 vs. uniprot
Match: A0A250XBE6_9CHLO (DNA replication complex GINS protein SLD5 n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XBE6_9CHLO)

HSP 1 Score: 62.0 bits (149), Expect = 9.210e-9
Identity = 35/124 (28.23%), Postives = 66/124 (53.23%), Query Frame = 0
Query:   26 AGHTQTRLPNALEGENPSQPGLNEAIDRMVMLARNEQFSPGILPHEFQTIQVIQALIKQQSDLVDDEDDTNANVSLESQLKRLEIDRINYTLRHYFRVRIKKIEENILFIFKNSSMLNDLSEAE 149
            A  + T L + L+  +PS    +  +++++    NE+ +P ILP++   ++ +Q  +++Q DL+ ++ D      L   +  LE+ RI Y LR YFR R++K+E     +  +  M+  LS  E
Sbjct:    6 ASFSGTPLTDFLDDSSPSTS--SNIVEKLIRAVFNEKNAPEILPYQADMVKDLQEKVEKQEDLLAEDLDREPAQELRKIVFSLELKRIRYLLRLYFRTRLRKLEATAAHVLGDEEMMERLSPLE 127          
BLAST of Gchil6835.t1 vs. uniprot
Match: A0A7J7CSX7_TRIWF (DNA replication complex GINS protein SLD5 n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7CSX7_TRIWF)

HSP 1 Score: 57.4 bits (137), Expect = 4.380e-7
Identity = 32/91 (35.16%), Postives = 56/91 (61.54%), Query Frame = 0
Query:   59 RNEQFSPGILPHEFQTIQVIQALIKQQSDLVDDEDDTNANVSLESQLKRLEIDRINYTLRHYFRVRIKKIEENILFIFKNSSMLNDLSEAE 149
            RNE+ +P ILP + + +  ++  I+ + + VD E + + N  L   L ++++DRI + LR Y RVR++KIE+ +  I K  ++ + LSE E
Sbjct:   34 RNEKAAPEILPFQTRLVNDMKDQIQWREETVD-EFEESGNDPLTVSLYQMDLDRIQFLLRSYLRVRLQKIEKYMFHILKTDNLRDRLSEQE 123          
BLAST of Gchil6835.t1 vs. uniprot
Match: A0A5C7IQK6_9ROSI (DNA replication complex GINS protein SLD5 n=2 Tax=Sapindales TaxID=41937 RepID=A0A5C7IQK6_9ROSI)

HSP 1 Score: 56.2 bits (134), Expect = 1.130e-6
Identity = 29/91 (31.87%), Postives = 56/91 (61.54%), Query Frame = 0
Query:   59 RNEQFSPGILPHEFQTIQVIQALIKQQSDLVDDEDDTNANVSLESQLKRLEIDRINYTLRHYFRVRIKKIEENILFIFKNSSMLNDLSEAE 149
            RNE+ +P IL  + Q ++  +  I+   + V++ + +  +  L   L ++++DR  + LR Y R+R++K+E+ + +I+KN S+ N LSE E
Sbjct:   33 RNEKAAPEILQFQVQLVKRAREQIQLMEETVEEFEQSGMD-PLTVSLYQMDLDRAQFLLRSYLRIRLQKLEKYMFYIWKNDSLRNRLSEPE 122          
BLAST of Gchil6835.t1 vs. uniprot
Match: A0A835LGG3_9MAGN (DNA replication complex GINS protein SLD5 n=2 Tax=Coptis chinensis TaxID=261450 RepID=A0A835LGG3_9MAGN)

HSP 1 Score: 54.7 bits (130), Expect = 4.310e-6
Identity = 36/112 (32.14%), Postives = 59/112 (52.68%), Query Frame = 0
Query:   38 EGENPSQPGLNEAIDRMVMLARNEQFSPGILPHEFQTIQVIQALIKQQSDLVDDEDDTNANVSLESQLKRLEIDRINYTLRHYFRVRIKKIEENILFIFKNSSMLNDLSEAE 149
            E ++PS       ++ M    RNE+ SP IL  +   +  I+  I+     V+ E + N    L   L ++++DR  + LR Y R+R+ KIE+ +++I K + M N LSE E
Sbjct:   15 EIDDPSIATTPNDVEPMKRAWRNEKASPEILEFQSDLVDRIRGQIELNERNVE-EFEQNGTDPLTISLYQMDLDRSQFLLRSYLRIRLYKIEKYMIYISKTTDMWNRLSEQE 125          
BLAST of Gchil6835.t1 vs. uniprot
Match: UPI0012630B00 (DNA replication complex GINS protein sld5 isoform X2 n=1 Tax=Pistacia vera TaxID=55513 RepID=UPI0012630B00)

HSP 1 Score: 54.3 bits (129), Expect = 5.690e-6
Identity = 35/94 (37.23%), Postives = 59/94 (62.77%), Query Frame = 0
Query:   59 RNEQFSPGILPHEFQTIQVIQALIKQQSDLVDD---EDDTNANVSLESQLKRLEIDRINYTLRHYFRVRIKKIEENILFIFKNSSMLNDLSEAE 149
            RNE+ +P IL  +FQ + V +A  ++Q  LV++   E + +    L   L ++++DR  + LR Y RVR++KIE+ + +I+KN ++ N LSE E
Sbjct:   33 RNEKAAPEIL--QFQALLVKRA--REQIQLVEETVEEFEGSGMDPLTVSLYQMDLDRAQFLLRSYLRVRLQKIEKYMFYIWKNDNLRNRLSEPE 122          
The following BLAST results are available for this feature:
BLAST of Gchil6835.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A2V3IXJ8_9FLOR2.890e-4755.19DNA replication complex GINS protein SLD5 n=1 Tax=... [more]
R7Q402_CHOCR1.070e-3550.00DNA replication complex GINS protein SLD5 n=1 Tax=... [more]
A0A0L0D2U3_THETB5.860e-1036.27DNA replication complex GINS protein SLD5 n=1 Tax=... [more]
A0A024GPQ5_9STRA7.400e-1032.17DNA replication complex GINS protein SLD5 n=1 Tax=... [more]
F0WP87_9STRA7.460e-935.51DNA replication complex GINS protein SLD5 n=1 Tax=... [more]
A0A250XBE6_9CHLO9.210e-928.23DNA replication complex GINS protein SLD5 n=1 Tax=... [more]
A0A7J7CSX7_TRIWF4.380e-735.16DNA replication complex GINS protein SLD5 n=1 Tax=... [more]
A0A5C7IQK6_9ROSI1.130e-631.87DNA replication complex GINS protein SLD5 n=2 Tax=... [more]
A0A835LGG3_9MAGN4.310e-632.14DNA replication complex GINS protein SLD5 n=2 Tax=... [more]
UPI0012630B005.690e-637.23DNA replication complex GINS protein sld5 isoform ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.58.1030coord: 38..152
e-value: 2.7E-20
score: 74.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 18..42
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 15..45
IPR008591GINS complex subunit Sld5PANTHERPTHR21206SLD5 PROTEINcoord: 32..151
IPR036224GINS, helical bundle-like domain superfamilySUPERFAMILY158573GINS helical bundle-likecoord: 48..150

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004376_piloncontigtig00004376_pilon:232804..233342 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6835.t1Gchil6835.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004376_pilon 232804..233342 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6835.t1 ID=Gchil6835.t1|Name=Gchil6835.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=153bp
MSSYSDHGDEIPRFSFGSMALSQEQAGHTQTRLPNALEGENPSQPGLNEA
IDRMVMLARNEQFSPGILPHEFQTIQVIQALIKQQSDLVDDEDDTNANVS
LESQLKRLEIDRINYTLRHYFRVRIKKIEENILFIFKNSSMLNDLSEAEN
SH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008591GINS_Sld5
IPR036224GINS_bundle-like_dom_sf