Gchil6881.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male
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Overview
Homology
BLAST of Gchil6881.t1 vs. uniprot
Match: A0A2V3INY1_9FLOR (Ribosomal large subunit pseudouridine synthase B n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INY1_9FLOR) HSP 1 Score: 289 bits (740), Expect = 1.030e-93 Identity = 145/238 (60.92%), Postives = 182/238 (76.47%), Query Frame = 0
Query: 119 MGFASRRGAEKLIESGSVRVNNRSVTKSGMLVVPGKDIIHVDGKLAKLQTPVWVAVHKPRGMNSLPSTSRRSVDSEFPSELRKGLIPVAGIEEDASGLLILSNDRKAVAQLNNPDCNLVIEWVVDCYGPVSNSKVIELQRGVVLEGEKDVFRPKNLECQGSARIELSPREKTILTRFVVRVREHRRQLMSRFFSSVGLTVVRMSRRSFGPVLLSPLRRGSFRQLTPNEIKAMIRGVKE 356
MG ASRR AEKLIESG VRVN R V + G+LV G+DIIHV+GK +W+A+HKP+G+ S+P TS RS+D+ P +KGL+ V GI EDASGL+ILSNDR A AQLN P+ + EW VDC+GPVS SKV ELQRG +++GE+D F P+++ C G+ R+ELSPR+K LTRF V +RE+RRQL+ R F++ GL VV MSRRSFGPVLLS L+RG FR LTPNE+KA+ RGVK+
Sbjct: 1 MGVASRRNAEKLIESGCVRVNKRKVKQQGLLVKAGEDIIHVNGKEITPPKCIWIAIHKPKGIVSIPGTSGRSIDTYIPPAKKKGLVVVGGIGEDASGLVILSNDRAAAAQLNGPENMHIKEWYVDCHGPVSLSKVRELQRGAIVDGERDRFTPESVRCLGTERVELSPRDKATLTRFEVGIRENRRQLIQRLFNAAGLKVVNMSRRSFGPVLLSSLKRGDFRYLTPNEVKALKRGVKK 238
BLAST of Gchil6881.t1 vs. uniprot
Match: R7Q3W5_CHOCR (S4 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q3W5_CHOCR) HSP 1 Score: 206 bits (525), Expect = 6.060e-60 Identity = 122/248 (49.19%), Postives = 159/248 (64.11%), Query Frame = 0
Query: 108 EAQRLQKVLAQMGFASRRGAEKLIESGSVRVNNRSVTKSGMLVVPGKDIIHVDGKLAKLQT-PVWVAVHKPRGMNSLPST-SRRSVDSEFPSELRKGLIPVAGIEEDASGLLILSNDRKAVAQLNNPDCNLVIEWVVDCYGPVSNSKVIELQRGVVLEGEKDVFRPKNLECQGSARIELSPREKTILTRFVVRVREHRRQLMSRFFSSVGLTVVRMSRRSFGPVLLSPLRRGSFRQLTPNEIKAMIRG 353
EA+RLQKV++++G ASRR +E+LI G VRVN R V G LV KD I V+GK LQ VW+AVHKP G SLP +R+S+ P + R GLI V GI+++ SG++IL+N+R V ++P V EW VDC G VSN+ V L+RGV L+GE +++ GS R++L+ LTR VRVRE RR+L+ R F VGL V SR+SFGPV L L+RG FR LTP E+KA+ RG
Sbjct: 113 EAERLQKVMSRLGVASRRKSEELIAEGKVRVNGRIVKGQGTLVNSRKDRITVNGKELTLQDRAVWMAVHKPTGYLSLPRDGNRKSIMDLIPPKKRNGLITVGGIDDEHSGIVILTNERGQVPMQSSPQNRHVKEWRVDCEGAVSNAAVDALRRGVHLKGELSKCLAADVQIVGSERVQLALGVNKTLTRMEVRVRESRRRLIRRLFEHVGLQVFHASRKSFGPVHLGSLKRGDFRYLTPKEVKALTRG 360
BLAST of Gchil6881.t1 vs. uniprot
Match: C9R7X1_AMMDK (Pseudouridine synthase n=2 Tax=Ammonifex TaxID=42837 RepID=C9R7X1_AMMDK) HSP 1 Score: 135 bits (340), Expect = 5.830e-34 Identity = 88/243 (36.21%), Postives = 140/243 (57.61%), Query Frame = 0
Query: 110 QRLQKVLAQMGFASRRGAEKLIESGSVRVNNRSVTKSGMLVVPGKDIIHVDGKLAKL-QTPVWVAVHKPRGM-NSLPSTSRRSVDSEFPSELRKGLIPVAGIEEDASGLLILSNDRKAVAQLNNPDCNLVIEWVVDCYGPVSNSKVIELQRGVVLEGEKDVFRPKNLECQGSARIELSPREKTILTRFVVRVREHRRQLMSRFFSSVGLTVVRMSRRSFGPVLLSPLRRGSFRQLTPNEIKAM 350
+RLQKVLA+ G ASRR AE+LI +G V+VN + V K G+ V P +D I VDGK KL + V++A HKPRG+ +L R ++F +++ + PV ++ D+ GLL+L+ND + +L +P ++ ++V G V K+ L+RG+ LE + R+ R +T+L + +RE R++ + R ++G V+R+ R + GPV L PLR G +R LTP E+ ++
Sbjct: 4 ERLQKVLARAGIASRRKAEELIVAGRVKVNGQVVDKLGVKVDPERDSIEVDGKPVKLPERLVYLAFHKPRGVVTTLHDPQGRPKVADFLKGIKERVFPVGRLDYDSEGLLLLTNDGELAHRLLHPRFHVPKTYLVWVKGEVGKEKLNLLRRGIKLEDGPTL--------PAEVRVLRRARGETVLQ---LTIREGRKRQIRRMLKALGCEVLRLKRVAVGPVRLGPLRPGEYRHLTPREVDSL 235
BLAST of Gchil6881.t1 vs. uniprot
Match: A0A0C2QJF3_9BACL (Pseudouridine synthase n=1 Tax=Paenibacillus sp. VKM B-2647 TaxID=1590651 RepID=A0A0C2QJF3_9BACL) HSP 1 Score: 134 bits (337), Expect = 1.480e-33 Identity = 88/243 (36.21%), Postives = 138/243 (56.79%), Query Frame = 0
Query: 110 QRLQKVLAQMGFASRRGAEKLIESGSVRVNNRSVTKSGMLVVPGKDIIHVDGKLAKLQTPVWVAVHKPRGM-NSLPSTSRRSVDSEFPSELRKGLIPVAGIEEDASGLLILSNDRKAVAQLNNPDCNLVIEWVVDCYGPVSNSKVIELQRGVVLEGEKDVFRPKNLECQGSARIELSPREK-TILTRFVVRVREHRRQLMSRFFSSVGLTVVRMSRRSFGPVLLSPLRRGSFRQLTPNEIKAM 350
+RLQKVLA+ G ASRR +E+LI SG V VN ++VT G+ V P KD+I VDGK Q+ V+V +HKP+G+ S+ R V ++F +++ + PV ++ D GLLIL+ND + L +P ++ + G + + +L+ GV LE + P +E +++ P K T+L+ + +RE R + + R +V VVR+ R +GP+ LS L RG FR L +E+K +
Sbjct: 2 ERLQKVLAEAGVASRRKSEELIASGRVEVNGQTVTALGVKVDPAKDVIKVDGKPISGQSKVYVLLHKPKGVITSVSDPGGRKVVTDFLHGIKERVFPVGRLDYDTEGLLILTNDGELANLLTHPKYHVPRTYHATIEGVPHGTVLDKLRSGVKLED--GMTAPAEVEY-----VDVDPENKRTVLS---ITIREGRNRQVRRMLEAVHFPVVRLKRVQYGPIELSGLARGKFRHLRADEVKLL 234
BLAST of Gchil6881.t1 vs. uniprot
Match: UPI001C39FAF8 (rRNA pseudouridine synthase n=1 Tax=Candidatus Paenibacillus intestinavium TaxID=2838719 RepID=UPI001C39FAF8) HSP 1 Score: 132 bits (331), Expect = 1.050e-32 Identity = 88/244 (36.07%), Postives = 135/244 (55.33%), Query Frame = 0
Query: 110 QRLQKVLAQMGFASRRGAEKLIESGSVRVNNRSVTKSGMLVVPGKDIIHVDGKLAKLQTPVWVAVHKPRGM-NSLPSTSRRSVDSEFPSELRKGLIPVAGIEEDASGLLILSNDRKAVAQLNNPDCNLVIEWVVDCYGPVSNSKVIELQRGVVLEGEKDVFRPKNLECQGSARIELSPREKTILTRFVVRVREHRRQLMSRFFSSVGLTVVRMSRRSFGPVLLSPLRRGSFRQLTPNEIKAMIR 352
+RLQK+LAQ G ASRR E+LI SG+V VN VT G+ V P D+I V+G+ + + ++V ++KP+G+ S R V S+F +++ + PV ++ D GLL+L+ND + L +P ++ + G S + +LQRGV LE + P +E Q +++ E TI + + E R + + R F ++G VVR+ R FG V L L RG FR LT +EIK +I+
Sbjct: 2 ERLQKILAQAGVASRRKCEELILSGAVEVNGEQVTTMGIKVNPNVDVITVNGRPIRSEKKIYVMLNKPKGVITSAKDPEGRKVVSDFLPGIKERVYPVGRLDYDTEGLLLLTNDGEFANLLTHPRHHVPKTYYATVKGVPHGSLLEKLQRGVELED--GMTAPAAVEYQD---VKMESNEATIS----ITIHEGRNRQVRRMFEAIGHKVVRLKRVRFGEVTLEGLPRGKFRHLTESEIKQLIK 236
BLAST of Gchil6881.t1 vs. uniprot
Match: A0A1G6LDP5_9BACI (Pseudouridine synthase n=1 Tax=Alkalihalobacillus lonarensis TaxID=1464122 RepID=A0A1G6LDP5_9BACI) HSP 1 Score: 130 bits (328), Expect = 2.730e-32 Identity = 85/245 (34.69%), Postives = 139/245 (56.73%), Query Frame = 0
Query: 108 EAQRLQKVLAQMGFASRRGAEKLIESGSVRVNNRSVTKSGMLVVPGKDIIHVDGKLAKLQTPVWVAVHKPRGMNSLPSTS--RRSVDSEFPSELRKGLIPVAGIEEDASGLLILSNDRKAVAQLNNPDCNLVIEWVVDCYGPVSNSKVIELQRGVVLEGEKDVFRPKNLECQGSARIELSPREKTILTRFVVRVREHRRQLMSRFFSSVGLTVVRMSRRSFGPVLLSPLRRGSFRQLTPNEIKAM 350
E +RLQKV+AQ G ASRR AE+LIE+G V VN + VT+ GM V P KD + VDG L + PV+ ++KP G+ S S R++V + +E R + PV ++ D +GLL+L+ND + ++L +P + E+V G + +L+ GV LE K P ++ + L R++T + R ++ E + + + R F ++G V+++ R +G + L+ L+ G RQL P E++ +
Sbjct: 2 ERERLQKVIAQAGVASRRKAEELIEAGRVTVNGKKVTQLGMKVAPQKDKVAVDGVLLTKEAPVYYVMYKPAGVLSTVSDDKGRQTVVNYIETEAR--IYPVGRLDYDTTGLLLLTNDGEMASRLMHPRYGVEKEYVAKVEGIPERQLLKQLEAGVKLEDGKTA--PARVKL-----LSLDKRKQTAVIRLIIH--EGKNRQVRRMFEAIGHPVIKLKRERYGFLTLAGLQSGQARQLKPFEVRQL 235
BLAST of Gchil6881.t1 vs. uniprot
Match: A0A3M1Q9G3_9BACT (Pseudouridine synthase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A3M1Q9G3_9BACT) HSP 1 Score: 130 bits (327), Expect = 6.910e-32 Identity = 92/254 (36.22%), Postives = 141/254 (55.51%), Query Frame = 0
Query: 110 QRLQKVLAQMGFASRRGAEKLIESGSVRVNNRSVTKSGMLVVPGKDIIHVDGKLAKLQT--PVWVAVHKPRGM-NSLPSTSRRSVDSEF--PSELRKGLIPVAGIEEDASGLLILSNDRKAVAQLNNPDCNLVIEWVVDCYGPVSNSKVIELQRGVVLEGEKDVFRPKNLECQGSARIELSPREKTILTRFVVRVREHRRQLMSRFFSSVGLTVVRMSRRSFGPVLLSPLRRGSFRQLTPNEIKAMIRGVKEST 358
+RLQKVLA+ G ASRRGAE+L+ +G V VN R + G+ V P +D I VDGKL + T PV++AVHKPR M SL R ++ + +R+ + PV ++ DA GLL++++D ++ +P +LV + V +G + + + L+RGV + G + P + R+E + T LT V + E R+ + R F+ +G V R+ R + GPV L +R G R LTP E+ A+ R + T
Sbjct: 4 ERLQKVLARAGVASRRGAEELMRAGRVTVNGRVADRPGIKVDPERDHIKVDGKLLRRPTARPVYLAVHKPRAMITSLADPEGRPTVADLLRAARIRRRVFPVGRLDWDAEGLLLVTDDGAWADRIQHPRHHLVKTYSVKVHGRPTAAALDRLRRGVSI-GPGERTAPCRI------RVERTLEASTWLT---VELHEGRQNQLKRMFARIGCPVRRIRRTAVGPVRLGRMRIGEVRPLTPRELAALERALDAGT 247
BLAST of Gchil6881.t1 vs. uniprot
Match: A0A0M9UDB6_9CHLR (Pseudouridine synthase n=1 Tax=Ardenticatena maritima TaxID=872965 RepID=A0A0M9UDB6_9CHLR) HSP 1 Score: 129 bits (325), Expect = 1.140e-31 Identity = 92/255 (36.08%), Postives = 137/255 (53.73%), Query Frame = 0
Query: 110 QRLQKVLAQMGFASRRGAEKLIESGSVRVNNRSVTKSGMLVVPGKDIIHVDGKLAKLQT--PVWVAVHKPRGMNSL--PSTSRRSVDSEFPSELRKGLIPVAGIEEDASGLLILSNDRKAVAQLNNPDCNLVIEWVVDCYGPVSNSKVIELQRGVVLEGEKDVFRPKNLECQGSARIELSPREKTILTRFVVRVREHRRQLMSRFFSSVGLTVVRMSRRSFGPVLLSPLRRGSFRQLTPNEIKAMIRGVKESTVK 360
+RLQKVLA+ G ASRR AE++I G V VN R VT+ G V P +D I VDG +L ++A+HKPR + R++V P + L+PV ++ ++ GL++L+ND V L +P E+VV+ YG + ++ GVVLE K R+E + TIL V +RE R++ + R F +G V ++ R GP+ L L RG++R+LTP E+KA+ + V+E T K
Sbjct: 4 ERLQKVLARAGVASRREAEEMIRQGRVDVNGRMVTELGTKVDPEQDEIRVDGVRVRLDQVRKRYIALHKPRHYITTMRDQFGRKTVVDLVPFAAEEHLVPVGRLDAESEGLILLTNDGDLVNVLTHPRYQHEKEYVVEVYGHPNEDFFEAVKHGVVLEDGTRTLPAK-------VRVERKTDDTTILR---VILREGRKRQIRRMFGILGHPVRKLKRVRIGPITLGNLPRGAWRELTPKEVKALQQLVREQTRK 248
BLAST of Gchil6881.t1 vs. uniprot
Match: UPI00048C674C (rRNA pseudouridine synthase n=2 Tax=Paenibacillus TaxID=44249 RepID=UPI00048C674C) HSP 1 Score: 128 bits (322), Expect = 2.250e-31 Identity = 82/244 (33.61%), Postives = 138/244 (56.56%), Query Frame = 0
Query: 110 QRLQKVLAQMGFASRRGAEKLIESGSVRVNNRSVTKSGMLVVPGKDIIHVDGKLAKLQTPVWVAVHKPRGM-NSLPSTSRRSVDSEFPSELRKGLIPVAGIEEDASGLLILSNDRKAVAQLNNPDCNLVIEWVVDCYGPVSNSKVIELQRGVVLEGEKDVFRPKNLECQGSARIELSP-REKTILTRFVVRVREHRRQLMSRFFSSVGLTVVRMSRRSFGPVLLSPLRRGSFRQLTPNEIKAMI 351
+RLQKVLA+ G ASRR E+LI +G V+VN+ VT G+ V P KD+IHVDG+ + Q V+V +KP+G+ S R + ++F E+++ + PV ++ D GLL+L+ND + L +P ++ + G S + +L+ G+ LE + P +E +++P + +TI++ + + E R + + R F ++ V+++ R FGP+ L + RG FR L P E+K +I
Sbjct: 2 ERLQKVLAEAGVASRRKCEELITAGRVQVNDSVVTTLGVKVDPQKDVIHVDGRAIRQQKKVYVLFNKPKGVITSASDPGGRKIVTDFLKEIKERIYPVGRLDYDTEGLLLLTNDGEFANLLTHPKHHVPRTYHATVKGVPHGSLLDKLRAGIQLED--GMTAPAEVEYY-----DVNPEKNETIVS---MTIYEGRNRQVRRMFEAIQFPVIKLKRVQFGPIPLLGVARGKFRHLRPQEVKELI 235
BLAST of Gchil6881.t1 vs. uniprot
Match: UPI0019582D7E (rRNA pseudouridine synthase n=1 Tax=Aquibacillus albus TaxID=1168171 RepID=UPI0019582D7E) HSP 1 Score: 128 bits (321), Expect = 3.060e-31 Identity = 82/255 (32.16%), Postives = 141/255 (55.29%), Query Frame = 0
Query: 107 NEAQRLQKVLAQMGFASRRGAEKLIESGSVRVNNRSVTKSGMLVVPGKDIIHVDGKLAKLQTPVWVAVHKPRGM-NSLPSTSRRSVDSEFPSELRKGLIPVAGIEEDASGLLILSNDRKAVAQLNNPDCNLVIEWVVDCYGPVSNSKVIELQRGVVLEGEKDVFRPKNLECQGSARIELSPREKTILTRFVVRVREHRRQLMSRFFSSVGLTVVRMSRRSFGPVLLSPLRRGSFRQLTPNEIKAMIRGVKESTVK 360
N RLQKV+AQ G ASRR AEKLIE G V+VN + VT G V P D + V+G + + PV+ ++KPRG+ +S+ R V +E E+++ + PV ++ D SG+L+L+ND + L +P + +V G + ++++L++G+V++GEK L+ + + R+ T + + ++ ++R+ + R + V ++ R FG + L L G +R+LTP E+K +I K++ K
Sbjct: 3 NYQDRLQKVIAQSGVASRRKAEKLIEDGKVKVNGKVVTTLGTKVSPD-DEVEVEGIPLEKEQPVYYLLYKPRGVISSVKDEKGRKVVTELLPEIKERIFPVGRLDYDTSGILLLTNDGEFANLLMHPKHQMSKVYVAKIKGIPTKDQLLQLKKGIVVDGEK-------LKAEHVKVLSTDNRKNTAIIQLILHQGKNRQ--IRRMMEYIEFPVDKLKREQFGFLTLQGLNPGEYRELTPKEVKQLIAEAKKNRKK 247 The following BLAST results are available for this feature:
BLAST of Gchil6881.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gchil6881.t1 ID=Gchil6881.t1|Name=Gchil6881.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=370bpback to top |