Gchil6868.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6868.t1
Unique NameGchil6868.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length230
Homology
BLAST of Gchil6868.t1 vs. uniprot
Match: A0A2V3IP08_9FLOR (UVR domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IP08_9FLOR)

HSP 1 Score: 303 bits (775), Expect = 1.460e-101
Identity = 141/185 (76.22%), Postives = 161/185 (87.03%), Query Frame = 0
Query:   41 ASARCCVEQPAWKRGPVDIDFQRDEQLQTLEEDLDDALQVEDYMKASEIRDKLLRLQSGAYVAVLSANMKFYKAFSTGSIVGIASCWLQDPSVCCKHPSGPLAVGFLEVMNSFGYIFSLGVPQIDVKDVCITMRGAVAYVTCGEYSTDWEDDEGRGCTVVMNAINIFTKKNGEWYICHHSALPVT 225
            A   CC EQPAWKRGPVD+DF +DEQLQ LEEDLDDALQ+ED+ +AS IRDKL+RLQSGAYVAVLSA+MKFYKAFS GSIV IA+ WLQ+ S  CKHP GPL  G+LEV+NSFGY+FS G+PQIDVK+VCITMRG+VAYVTC E+STDWE + G+G   +MNAINIFTKKNG+WYICHHSALPVT
Sbjct:   45 ARIHCCTEQPAWKRGPVDVDFAKDEQLQILEEDLDDALQLEDFKRASGIRDKLVRLQSGAYVAVLSAHMKFYKAFSYGSIVDIAASWLQEDSASCKHPLGPLVSGYLEVINSFGYVFSAGIPQIDVKNVCITMRGSVAYVTCEEHSTDWEANNGKGENTIMNAINIFTKKNGQWYICHHSALPVT 229          
BLAST of Gchil6868.t1 vs. uniprot
Match: A0A6J0K0I2_RAPSA (uncharacterized protein LOC108813011 n=10 Tax=Brassiceae TaxID=981071 RepID=A0A6J0K0I2_RAPSA)

HSP 1 Score: 112 bits (279), Expect = 1.320e-26
Identity = 62/161 (38.51%), Postives = 91/161 (56.52%), Query Frame = 0
Query:   69 TLEEDLDDALQVEDYMKASEIRDKLLRLQSGAYVAVLSANMKFYKAFSTGSIVGIASCWLQDPSVCCKHPSGPLAVGFLEVMNSF-----GYIFSLGVPQIDVKDVCITMRGAVAYVTCGEYSTDWEDDEGRGCTVVMNAINIFTKKNGEWYICHHSALPV 224
            TL++DL+ A+Q E+Y++A+ IRD+L  LQ  +  +VLSAN +FY+AF  G +  + S W +    CC HP      G+ +V+ S+      Y F L    I++KDV + +RG V YVTC E+       +G          N+F K +GEW+IC H A PV
Sbjct:   88 TLKQDLESAIQDENYVEAARIRDRLKELQEDSRASVLSANTRFYQAFRNGDLAAMQSLWSKSGKPCCVHPGAKGITGYDDVVESWEVVWMNYEFPL---LIELKDVEVHVRGEVGYVTCMEFVKT----KGSSSWGAQFVSNVFEKIDGEWFICIHHASPV 241          
BLAST of Gchil6868.t1 vs. uniprot
Match: Q9SR38_ARATH (F3L24.12 protein n=12 Tax=Brassicaceae TaxID=3700 RepID=Q9SR38_ARATH)

HSP 1 Score: 108 bits (271), Expect = 2.040e-25
Identity = 61/161 (37.89%), Postives = 91/161 (56.52%), Query Frame = 0
Query:   69 TLEEDLDDALQVEDYMKASEIRDKLLRLQSGAYVAVLSANMKFYKAFSTGSIVGIASCWLQDPSVCCKHPSGPLAVGFLEVMNSF-----GYIFSLGVPQIDVKDVCITMRGAVAYVTCGEYSTDWEDDEGRGCTVVMNAINIFTKKNGEWYICHHSALPV 224
            TL++DL+ A+Q E+Y++A++IRDKL  LQ     +VLSAN +FY++F  G +  + S W +  + CC HP      G+  VM S+      Y F L    I++KDV + +RG V YVTC E+       +G          N+F + +G+W+IC H A PV
Sbjct:   89 TLKQDLETAVQEENYVEAAKIRDKLKELQEDNKASVLSANSRFYQSFRNGDLAAMQSLWSKSGNPCCVHPGAKGITGYDYVMESWELVWMNYEFPL---LIELKDVEVHVRGEVGYVTCMEFVKT----KGSSSWGAQFVSNVFERIDGQWFICIHHASPV 242          
BLAST of Gchil6868.t1 vs. uniprot
Match: R0I0C4_9BRAS (Uncharacterized protein n=2 Tax=Camelineae TaxID=980083 RepID=R0I0C4_9BRAS)

HSP 1 Score: 108 bits (270), Expect = 2.860e-25
Identity = 58/158 (36.71%), Postives = 93/158 (58.86%), Query Frame = 0
Query:   69 TLEEDLDDALQVEDYMKASEIRDKLLRLQSGAYVAVLSANMKFYKAFSTGSIVGIASCWLQDPSVCCKHPSGPLAVGFLEVMNSFGYIF-SLGVP-QIDVKDVCITMRGAVAYVTCGEYSTDWEDDEGRGCTVVMNAINIFTKKNGEWYICHHSALPV 224
            TL++DL+ A+Q E+Y++A++IRDKL  LQ     +VLSAN +FY++F  G +  + S W +  + CC HP      G+  +M S+ +++ +   P QI++KDV   +RG + YVTC E+       +G          N+F + +G+W+IC H A PV
Sbjct:   89 TLKQDLEIAIQEENYVEAAKIRDKLKDLQEDNKASVLSANSRFYQSFRNGDLAAMQSLWSKTGNPCCVHPGAKGITGYDYIMESWEFVWMNYEFPLQIELKDVEAHVRGEIGYVTCMEFVKT----KGSSSWGAQFVSNVFERIDGQWFICIHHASPV 242          
BLAST of Gchil6868.t1 vs. uniprot
Match: A0A1S2Z1F7_CICAR (uncharacterized protein LOC101496396 isoform X1 n=2 Tax=Cicer arietinum TaxID=3827 RepID=A0A1S2Z1F7_CICAR)

HSP 1 Score: 106 bits (265), Expect = 2.060e-24
Identity = 60/159 (37.74%), Postives = 94/159 (59.12%), Query Frame = 0
Query:   69 TLEEDLDDALQVEDYMKASEIRDKLLRLQSGAYVAVLSANMKFYKAFSTGSIVGIASCWLQDPSVCCKHPSGPLAVGFLEVMNSFGYIFS-LGVP-QIDVKDVCITMRGAVAYVTCGEYSTDWEDDEGR-GCTVVMNAINIFTKKNGEWYICHHSALPV 224
            TL+E+L DA+  E+Y+KA+EIRD L  LQ  +  AV  AN++FY +F  G +  + S W +   VCC HP      G+ +V+ S+ ++++    P +I ++D+ +  RG + YVTC E+    +   GR G   V N   +F + +GEW+IC+H A PV
Sbjct:  103 TLQEELQDAIAEENYVKAAEIRDTLKNLQKDSKTAVFGANIRFYDSFRNGDLATMQSMWSKRDEVCCVHPGLKGISGYDDVVESWNFVWANYEFPLEIKIEDIKVHARGDMGYVTCMEFV---KTKGGRWGGQFVTN---VFERIDGEWFICNHHASPV 255          
BLAST of Gchil6868.t1 vs. uniprot
Match: UPI000B8C8A6E (uncharacterized protein LOC110814211 isoform X2 n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8C8A6E)

HSP 1 Score: 105 bits (261), Expect = 3.930e-24
Identity = 59/162 (36.42%), Postives = 93/162 (57.41%), Query Frame = 0
Query:   68 QTLEEDLDDALQVEDYMKASEIRDKLLRLQSGAYVAVLSANMKFYKAFSTGSIVGIASCWLQDPSVCCKHPSGPLAVGFLEVMNSF-----GYIFSLGVPQIDVKDVCITMRGAVAYVTCGEYSTDWEDDEGRGCTVVMNAINIFTKKNGEWYICHHSALPV 224
            Q L++DL+ A++ E+Y +A++IRD L  L   +  +VL+AN +FYK+F  G +  + + W +  + CC HP      G+  VM S+      Y F L   +I++KDV + +RG V YVTC    T++   +G G      A N+F + +GEW++C H A PV
Sbjct:   70 QALKQDLEIAIEEENYAEAAKIRDSLRALHDDSKASVLAANARFYKSFRNGDLAAMQALWTKGDNACCVHPGANGITGYEFVMESWEIVWVNYEFPL---EIELKDVEVHVRGNVGYVTC----TEFVKTKG-GSWGAQFATNVFERIHGEWFMCVHHASPV 223          
BLAST of Gchil6868.t1 vs. uniprot
Match: UPI000B8CB0D0 (uncharacterized protein LOC110814211 isoform X1 n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8CB0D0)

HSP 1 Score: 105 bits (261), Expect = 9.710e-24
Identity = 59/162 (36.42%), Postives = 93/162 (57.41%), Query Frame = 0
Query:   68 QTLEEDLDDALQVEDYMKASEIRDKLLRLQSGAYVAVLSANMKFYKAFSTGSIVGIASCWLQDPSVCCKHPSGPLAVGFLEVMNSF-----GYIFSLGVPQIDVKDVCITMRGAVAYVTCGEYSTDWEDDEGRGCTVVMNAINIFTKKNGEWYICHHSALPV 224
            Q L++DL+ A++ E+Y +A++IRD L  L   +  +VL+AN +FYK+F  G +  + + W +  + CC HP      G+  VM S+      Y F L   +I++KDV + +RG V YVTC    T++   +G G      A N+F + +GEW++C H A PV
Sbjct:  112 QALKQDLEIAIEEENYAEAAKIRDSLRALHDDSKASVLAANARFYKSFRNGDLAAMQALWTKGDNACCVHPGANGITGYEFVMESWEIVWVNYEFPL---EIELKDVEVHVRGNVGYVTC----TEFVKTKG-GSWGAQFATNVFERIHGEWFMCVHHASPV 265          
BLAST of Gchil6868.t1 vs. uniprot
Match: A0A7J7GJ80_CAMSI (Uncharacterized protein n=1 Tax=Camellia sinensis TaxID=4442 RepID=A0A7J7GJ80_CAMSI)

HSP 1 Score: 103 bits (257), Expect = 1.020e-23
Identity = 62/163 (38.04%), Postives = 93/163 (57.06%), Query Frame = 0
Query:   64 DEQLQTLEEDLDDALQVEDYMKASEIRDKLLRLQSGAYVAVLSANMKFYKAFSTGSIVGIASCWLQDPSVCCKHPSGPLAVGFLEVMNSFGYIFS-LGVP-QIDVKDVCITMRGAVAYVTCGEYSTDWEDDEGRGCTVVMNAINIFTKKNGEWYICHHSALPV 224
            DEQ QTLE +L  A+Q E+Y +A++IRD L  LQ     +VL+AN +FY +F  G +  + + W ++ +VC  HP      G+  VM S+ ++++    P QI++KDV + +RG + YVTC E         GR       A N+F + NG+W+IC H A  V
Sbjct:   50 DEQ-QTLERELQIAIQEENYAQAAKIRDSLRVLQEDGKASVLAANARFYNSFKNGDLASMQALWAKEDNVCVVHPGVSGISGYDLVMGSWEFVWADYEFPLQIEIKDVQVHVRGDLGYVTCIELVKTKGSSWGR-----QFATNVFERINGQWFICIHHASHV 206          
BLAST of Gchil6868.t1 vs. uniprot
Match: A0A161X3B3_DAUCS (UVR domain-containing protein n=2 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A161X3B3_DAUCS)

HSP 1 Score: 102 bits (253), Expect = 1.160e-23
Identity = 58/156 (37.18%), Postives = 90/156 (57.69%), Query Frame = 0
Query:   68 QTLEEDLDDALQVEDYMKASEIRDKLLRLQSGAYVAVLSANMKFYKAFSTGSIVGIASCWLQDPSVCCKHPSGPLAVGFLEVMNSFGYIFS-LGVP-QIDVKDVCITMRGAVAYVTCGEYSTDWEDDEGRGCTVVMNAINIFTKKNGEWYICHHSA 221
            Q+LE +L +A+  E+Y +A++IRD L  LQ  +  +VL+AN +FY +F  G +V + + W +  +VC  HP      G+  VM S+ ++++    P QI+VKDV + +RG + YVTC E         GR       A N+F K NG+W++C H A
Sbjct:    4 QSLERELQNAIDEENYARAAKIRDSLRNLQEDSKASVLAANAQFYNSFRNGDLVTMQALWSKGDNVCVVHPGVSGISGYDLVMGSWEFVWADYEFPLQIEVKDVQVNVRGDLGYVTCIEMVKTKGKSWGR-----QFATNVFEKINGQWFMCIHHA 154          
BLAST of Gchil6868.t1 vs. uniprot
Match: A0A067JNX0_JATCU (SnoaL-like domain-containing protein n=1 Tax=Jatropha curcas TaxID=180498 RepID=A0A067JNX0_JATCU)

HSP 1 Score: 103 bits (257), Expect = 2.120e-23
Identity = 56/162 (34.57%), Postives = 86/162 (53.09%), Query Frame = 0
Query:   68 QTLEEDLDDALQVEDYMKASEIRDKLLRLQSGAYVAVLSANMKFYKAFSTGSIVGIASCWLQDPSVCCKHPSGPLAVGFLEVMNSF-----GYIFSLGVPQIDVKDVCITMRGAVAYVTCGEYSTDWEDDEGRGCTVVMNAINIFTKKNGEWYICHHSALPV 224
            Q L +DL  A+  E+Y +A++IRD L  LQ  +  +VL+AN +FY AF  G +  + S W +  + CC HP     +G+ ++M S+      Y F L   +I++KD  +  +G + YVTC E+        G          N+F K +G+W+IC H A PV
Sbjct:   85 QALMQDLQIAIDEENYAQAAKIRDSLRMLQEDSKASVLAANARFYNAFRNGDLASMQSLWAKGDNTCCVHPGASGVIGYDDIMESWELVWMNYDFPL---EIELKDARVHFKGDIGYVTCIEFVRTKGSSWGA-----QFVTNVFEKIDGQWFICVHHASPV 238          
The following BLAST results are available for this feature:
BLAST of Gchil6868.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IP08_9FLOR1.460e-10176.22UVR domain-containing protein n=1 Tax=Gracilariops... [more]
A0A6J0K0I2_RAPSA1.320e-2638.51uncharacterized protein LOC108813011 n=10 Tax=Bras... [more]
Q9SR38_ARATH2.040e-2537.89F3L24.12 protein n=12 Tax=Brassicaceae TaxID=3700 ... [more]
R0I0C4_9BRAS2.860e-2536.71Uncharacterized protein n=2 Tax=Camelineae TaxID=9... [more]
A0A1S2Z1F7_CICAR2.060e-2437.74uncharacterized protein LOC101496396 isoform X1 n=... [more]
UPI000B8C8A6E3.930e-2436.42uncharacterized protein LOC110814211 isoform X2 n=... [more]
UPI000B8CB0D09.710e-2436.42uncharacterized protein LOC110814211 isoform X1 n=... [more]
A0A7J7GJ80_CAMSI1.020e-2338.04Uncharacterized protein n=1 Tax=Camellia sinensis ... [more]
A0A161X3B3_DAUCS1.160e-2337.18UVR domain-containing protein n=2 Tax=Daucus carot... [more]
A0A067JNX0_JATCU2.120e-2334.57SnoaL-like domain-containing protein n=1 Tax=Jatro... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.450.50coord: 96..227
e-value: 7.6E-30
score: 105.6
NoneNo IPR availablePANTHERPTHR34957NUCLEAR TRANSPORT FACTOR 2 (NTF2) FAMILY PROTEINcoord: 62..224
IPR037401SnoaL-like domainPFAMPF13474SnoaL_3coord: 104..220
e-value: 5.7E-12
score: 46.1
IPR001943UVR domainPFAMPF02151UVRcoord: 64..97
e-value: 1.7E-5
score: 24.4
IPR001943UVR domainPROSITEPS50151UVRcoord: 64..99
score: 8.437765
IPR032710NTF2-like domain superfamilySUPERFAMILY54427NTF2-likecoord: 103..221

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004376_piloncontigtig00004376_pilon:468336..469025 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6868.t1Gchil6868.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004376_pilon 468336..469025 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6868.t1 ID=Gchil6868.t1|Name=Gchil6868.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=230bp
MSTAFTNSPPLRFQRSTRIGGVHPFGQNPNRLSRISLMRAASARCCVEQP
AWKRGPVDIDFQRDEQLQTLEEDLDDALQVEDYMKASEIRDKLLRLQSGA
YVAVLSANMKFYKAFSTGSIVGIASCWLQDPSVCCKHPSGPLAVGFLEVM
NSFGYIFSLGVPQIDVKDVCITMRGAVAYVTCGEYSTDWEDDEGRGCTVV
MNAINIFTKKNGEWYICHHSALPVTQFIE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037401SnoaL-like
IPR001943UVR_dom
IPR032710NTF2-like_dom_sf