Gchil6872.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6872.t1
Unique NameGchil6872.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length304
Homology
BLAST of Gchil6872.t1 vs. uniprot
Match: UPI001E1DB02D (uncharacterized protein LOC123543982 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DB02D)

HSP 1 Score: 114 bits (285), Expect = 7.490e-25
Identity = 57/103 (55.34%), Postives = 75/103 (72.82%), Query Frame = 0
Query:  203 LESYRPQH--PYRTDLKGREIGADQIDKMRKAQVIEPAPPTQSQFPSPLVLVAKKDGSVRFYVDYRKLNAVTKRDSYPIPRMDDCLDSLSETVVFTTLEANSG 303
            +   +P H  PYR   + R + + +I +M KAQVIEPA    S++ SP+VLVAK DGS RF VDYR+LNA+T RDSYP+PRMD+C+DSL +  +FTTL+ NSG
Sbjct:  366 IPGQKPVHCQPYRAGPRARAVESAEIQRMLKAQVIEPA---TSEWASPIVLVAKPDGSTRFCVDYRRLNAITVRDSYPLPRMDECIDSLGDAKIFTTLDCNSG 465          
BLAST of Gchil6872.t1 vs. uniprot
Match: A0A6B0VG70_IXORI (Putative retrotransposable element (Fragment) n=1 Tax=Ixodes ricinus TaxID=34613 RepID=A0A6B0VG70_IXORI)

HSP 1 Score: 111 bits (277), Expect = 1.350e-23
Identity = 87/322 (27.02%), Postives = 147/322 (45.65%), Query Frame = 0
Query:   22 FLVCPNLGAEAILGTSFIDRYIKAIYPGLNKVAFYRASSDSIIGSALVPEANRKRAVVCENTKSNKVRLSTAITIPPMTQIALSVHSQSP--GLVTIQNHPETVLKHLTLTAHGVMDILPNRSFFVTISNFRDKPVRLPKGTVIG-------ITLLAPVAIMEAQMDNLATPTPDEDVDS---WEGRVAIRAALESYR--------------------------PQH--PYRTDLKGREIGADQIDKMRKAQVIEPAPPTQSQFPSPLVLVAKKDGSVRFYVDYRKLNAVTKRDSYPIPRMDDCLDSLSETVVFTTLEANSG 303
            F++  +   + ILG +F+  Y   I  G N++          + + + P    +RA       ++ V L      PP + + + V + +   G V ++ + + +L      A GV ++   R+  V ++NFR++   L KG  +G          +A +A   +      TP    D+D+      R  +   +  Y                           P H  PYR  +K RE+   Q+++M    +I+P+    S + SP+VLV KKDG++RF VDYR+LNAVTK+D YP+PR+DD LD L  +  F++++  SG
Sbjct:  145 FVILQDCARDVILGMNFLREYAAVIDMGENRLT---------LRTPVPPSEKPQRASAAARVAADHVNL------PPRSSVVVPVVTDAATCGEVVLKGNLQLLLGRGIGVARGVAELQHGRTV-VLVTNFRNETQHLTKGAAVGHVEELRNSVEIAAIAEESSPPQQDTTPPAQLDIDAKLPGPKRRQLSNLIAEYSDCFATSSKVRQTTVAKHRIVTEDDVLPVHRSPYRVSVKEREVIQQQVEEMLNDDIIQPS---SSPWASPVVLVRKKDGTLRFCVDYRQLNAVTKKDVYPLPRIDDTLDRLRNSQYFSSMDLKSG 447          
BLAST of Gchil6872.t1 vs. uniprot
Match: UPI0019D6F6A4 (reverse transcriptase family protein n=1 Tax=Rickettsia endosymbiont of Ixodes scapularis TaxID=444612 RepID=UPI0019D6F6A4)

HSP 1 Score: 108 bits (271), Expect = 2.430e-23
Identity = 94/323 (29.10%), Postives = 151/323 (46.75%), Query Frame = 0
Query:   22 FLVCPNLGAEAILGTSFIDRYIKAIYPGLNKVAFYRASSDSIIGSALVPEANRKRAVVCENTKSNKVRLSTA-ITIPPMTQIALSVHSQSP--GLVTIQNHPETVLKHLTLTAHGVMDILPNRSFFVTISNFRDKPVRLPKGTVIG----ITLLAPVAIM--EAQMDNLATPTPDE-DVD-SWEG--RVAIRAALESYRP----------------------------QHPYRTDLKGREIGADQIDKMRKAQVIEPAPPTQSQFPSPLVLVAKKDGSVRFYVDYRKLNAVTKRDSYPIPRMDDCLDSLSETVVFTTLEANSG 303
            F+V  +   + ILG  F+  Y   I  G NK+   +           VP A   +A +        VR+ T+ + +PP++ + + V +     G+  ++   + +L      A GV ++   R+  + ++NFR +   L KGT +G    I   A +A++  +A   +    TP + D+D S  G  R  +   L  +                              Q PYR  +K RE    Q+ +M    +I+P+    S + SP+VLV KKDG++RF VDYR+LNAVTK+D YP+PR+DD LD L  T  F++++  SG
Sbjct:   64 FVVLQDCSRDVILGMDFLCEYGAIIDLGENKLTLRKP----------VPSAEDPKATLAA------VRVLTSHVNLPPLSSVFVPVGTDEATCGIALLEGSVQLLLGRGIGIARGVTELQDGRTVAL-VTNFRQESQHLTKGTAVGYVEEIQDSAAIAVISEDASPTHHKGTTPSKLDIDPSLPGPQRRQLTDVLAEFSECFATSSRLRQTAVAKHRIVTDDDVPPIHQSPYRVSVKERETIQKQVQEMLDDDIIQPS---SSPWASPVVLVKKKDGTLRFCVDYRRLNAVTKKDVYPLPRIDDTLDRLRHTRYFSSMDLKSG 366          
BLAST of Gchil6872.t1 vs. uniprot
Match: UPI001E1D9CF0 (uncharacterized protein LOC123544487 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D9CF0)

HSP 1 Score: 107 bits (268), Expect = 3.780e-23
Identity = 60/136 (44.12%), Postives = 82/136 (60.29%), Query Frame = 0
Query:  175 EAQMDNLATPTPDEDVDSWEGRVAIRAALESYRP-------QHPYRTDLKGREIGADQIDKMRKAQVIEPAPPTQSQFPSPLVLVAKKDGSVRFYVDYRKLNAVTKRDSYPIPRMDDCLDSLSETVVFTTLEANSG 303
            +AQ D L         + W+GR+     +    P         PYR     R++  ++I +M K++VIEP   T S + +P+VL+ K DGS+RF VDYR+LNAVT+ DSY +PR+DDCLDSL E   FTTL+ANSG
Sbjct:  207 DAQKDELIQMLETHQ-EMWDGRLGKIDTVSHRVPTTGPPVASQPYRAGPSSRKLIDEEIQRMLKSEVIEP---TSSPWSAPIVLIPKPDGSIRFCVDYRRLNAVTENDSYALPRIDDCLDSLGEAQFFTTLDANSG 338          
BLAST of Gchil6872.t1 vs. uniprot
Match: A0A4D5RY75_IXOSC (Putative transposon ty3-i gag-pol polyprotein (Fragment) n=1 Tax=Ixodes scapularis TaxID=6945 RepID=A0A4D5RY75_IXOSC)

HSP 1 Score: 108 bits (270), Expect = 1.050e-22
Identity = 92/325 (28.31%), Postives = 146/325 (44.92%), Query Frame = 0
Query:   22 FLVCPNLGAEAILGTSFIDRYIKAIYPGLNKVAFYRASSDSIIGSALVPEANRKRAVVCENTKSN--KVR-LSTAITIPPMTQIALSVHSQSP--GLVTIQNHPETVLKHLTLTAHGVMDILPNRSFFVTISNFRDKPVRLPKGTVIGITLLAPVAIMEAQMDNLATPTPDEDVDSWE----------GRVAIRAALESYR--------------------------PQH--PYRTDLKGREIGADQIDKMRKAQVIEPAPPTQSQFPSPLVLVAKKDGSVRFYVDYRKLNAVTKRDSYPIPRMDDCLDSLSETVVFTTLEANSG 303
            F+V  +   + ILG  F+  Y   I    NK+                    RK A   ENTK     VR L++ + +PP++ + + V ++    G+  ++   + +L      A  V ++   R+  + ++NFR +   L KGT +G       +   A +   A+PT ++ + S E           R  +R  L  +                           P H  PYR  +K RE    Q+ +M    +I+P+    S + SP+VLV KKDG++RF VDYR+LNAVTK+D YP+PR+DD LD L     F++++  SG
Sbjct:  120 FVVLQDCSRDVILGMDFLCEYGAIIDLAENKLTL------------------RKPAPSVENTKPTLAAVRVLASHVNLPPLSSVFVPVGTEGATCGVALLEGSVQLLLGRGIGIARAVTELQDGRTVAL-VTNFRHESQHLTKGTTVGYVEEIEDSAAIAVISEDASPTQNKTITSSELDIDPSLPAPQRRQLRDLLAEFSECFSTSSKVRQTTVAKHRIITDDDALPVHRPPYRVSVKEREAIQQQVQEMLDDDIIQPS---SSPWASPVVLVKKKDGTLRFCVDYRRLNAVTKKDVYPLPRIDDTLDRLRHARYFSSMDLKSG 422          
BLAST of Gchil6872.t1 vs. uniprot
Match: A0A4D5RYE1_IXOSC (Putative transposon ty3-g gag-pol polyprotein (Fragment) n=1 Tax=Ixodes scapularis TaxID=6945 RepID=A0A4D5RYE1_IXOSC)

HSP 1 Score: 107 bits (268), Expect = 1.310e-22
Identity = 91/323 (28.17%), Postives = 146/323 (45.20%), Query Frame = 0
Query:   22 FLVCPNLGAEAILGTSFIDRYIKAIYPGLNKVAFYRASSDSIIGSALVPEANRKRAVVCENTKSNKVR-LSTAITIPPMTQIALSVHSQSP--GLVTIQNHPETVLKHLTLTAHGVMDILPNRSFFVTISNFRDKPVRLPKGTVIG-ITLLAPVAIMEAQMDNLATPTPD--------------------------EDVDSWEGRVAIRAAL---------ESYRPQH--PYRTDLKGREIGADQIDKMRKAQVIEPAPPTQSQFPSPLVLVAKKDGSVRFYVDYRKLNAVTKRDSYPIPRMDDCLDSLSETVVFTTLEANSG 303
            F+V  +   + ILG  F+  Y   I  G N++   +  S         PE  +          S+ VR L++ + +PP + + + V       G V ++   + +L      A GV ++   R+  V ++NFR++   L KG  +G +  L   A + A  D  + P  D                          E  DS+     +R            +  RP H  PYR  +K R+   +Q+ +M    +I+P+    S + SP+VLV KKDG++RF VDYR+LN VTK+D YP+PR+DD LD L  +  F++++  SG
Sbjct:  127 FVVLQDCSRDVILGMDFLCEYGAVIDLGANRLTLRKPVSP--------PEEPK--------ATSSAVRVLASHVNLPPRSSVFVPVGITEDFCGEVLLEGSLQLLLGRGIGVARGVAELQDGRTV-VLVTNFRNEAQHLTKGAAVGQVEELQNSAAVAAITDEFSPPQQDSASPAQLDIDPKLPGPKRRQLINLLAEYRDSFATSSKVRQTTVAKHRIVTEDDARPVHRSPYRVSVKERQAIQEQVQEMLNDDIIQPS---SSPWASPVVLVKKKDGTLRFCVDYRQLNTVTKKDVYPLPRIDDTLDRLRHSRYFSSMDLKSG 429          
BLAST of Gchil6872.t1 vs. uniprot
Match: UPI001E1D3E38 (uncharacterized protein LOC123544752 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D3E38)

HSP 1 Score: 107 bits (268), Expect = 1.660e-22
Identity = 51/94 (54.26%), Postives = 71/94 (75.53%), Query Frame = 0
Query:  210 HPYRTDLKGREIGADQIDKMRKAQVIEPAPPTQSQFPSPLVLVAKKDGSVRFYVDYRKLNAVTKRDSYPIPRMDDCLDSLSETVVFTTLEANSG 303
            HPYR   K RE+   ++++M KA VIEPA    S++ SP+VLV K DGS+RF VDYRKLN++T +D+YP+PRMD+ +DSL +  +F+TL+ NSG
Sbjct:  365 HPYRAGPKAREMERQEVERMLKADVIEPA---CSEWASPVVLVPKPDGSLRFCVDYRKLNSITVKDTYPLPRMDESIDSLGDAAIFSTLDCNSG 455          
BLAST of Gchil6872.t1 vs. uniprot
Match: A0A2R5LEZ4_9ACAR (RNA-directed DNA polymerase (Fragment) n=1 Tax=Ornithodoros turicata TaxID=34597 RepID=A0A2R5LEZ4_9ACAR)

HSP 1 Score: 107 bits (268), Expect = 2.290e-22
Identity = 89/334 (26.65%), Postives = 150/334 (44.91%), Query Frame = 0
Query:   11 LQVGKFKVRTWFLVCPNLGAEAILGTSFIDRYIKAIYPGLNKVAFYRA--SSDSIIGSALVPEANRKRAVVCENTKSNKVRLSTAITIPPMTQIALSVHSQSP--GLVTIQNHPETVLKHLTLTAHGVMDILPNRSFFVTISNFRDKPVRLPKGTVIGITL----LAPVAIMEAQMDNLATPTPDE--DV--------------------DSWEGRVAIRAAL---------ESYRPQH--PYRTDLKGREIGADQIDKMRKAQVIEPAPPTQSQFPSPLVLVAKKDGSVRFYVDYRKLNAVTKRDSYPIPRMDDCLDSLSETVVFTTLEANSG 303
            +QV   +    F V PN   + ILG  F+    +AI    N V  ++   +++    + + PE      V    T+         + +PP++ + ++   +    G +  + + + +L+     A G++ +  N  F + ++NFR +P  L  GT I + +       V +M+     + T    E  DV                    D +     +R            E  RP H  PYR   K RE    Q+++M +  +I+P+    S + SP+VLV KKDG++RF VDYRKLN +TK+D YP+PR+DD LD L     F++++  +G
Sbjct:   59 IQVRDIQYVVSFAVLPNCPRDVILGMDFLVEN-EAIIDFTNGVISFKTPETAEDKWWARITPEKRANTDVTAVTTQH--------VNLPPLSSVLVTATCERAPTGCLLAEGNTQLLLERGIGIARGIVPVR-NGIFELLVTNFRPEPQHLANGTKIAVIVDQYSTTDVCLMDTARIAVTTEHEAEHFDVNPQLNTTQKQTLLQMLNDFSDCFAASSKVRQTPIAKHRIIVDEKARPIHRMPYRVSCKERETIRTQVEEMLRDDIIQPS---TSPWASPVVLVKKKDGTLRFCVDYRKLNEITKKDVYPLPRIDDTLDRLQNAKFFSSMDLKTG 379          
BLAST of Gchil6872.t1 vs. uniprot
Match: A0A4D5S1N0_IXOSC (Putative transposon ty3-g gag-pol polyprotein (Fragment) n=2 Tax=Ixodes scapularis TaxID=6945 RepID=A0A4D5S1N0_IXOSC)

HSP 1 Score: 106 bits (264), Expect = 6.760e-22
Identity = 91/323 (28.17%), Postives = 146/323 (45.20%), Query Frame = 0
Query:   22 FLVCPNLGAEAILGTSFIDRYIKAIYPGLNKVAFYRASSDSIIGSALVPEANRKRAVVCENTKSNKVR-LSTAITIPPMTQI--ALSVHSQSPGLVTIQNHPETVLKHLTLTAHGVMDILPNRSFFVTISNFRDKPVRLPKGTVIG-ITLLAPVAIMEAQMDNLATPTPDE------DVD----------------------SWEGRVAIRAAL-------ESYRPQH--PYRTDLKGREIGADQIDKMRKAQVIEPAPPTQSQFPSPLVLVAKKDGSVRFYVDYRKLNAVTKRDSYPIPRMDDCLDSLSETVVFTTLEANSG 303
            F+V  +   + ILG  F+  Y   I  G N++   + +          P A   +A       S  VR L+  + +PP + +   + +   S G V ++   + +L      A GV ++   R+  + ++NFR++   L KG  +G +  L   A + A  D  + P  D       D+D                      +   +V   A         +  RP H  PYR   K RE+   Q+ +M    +I+P+    S + SP+VLV KKDG++RF VDYR+LN VTK+D YP+PR+DD LD L  +  F++++  SG
Sbjct:  127 FVVLQDCSRDVILGMDFLCEYGAVIDLGTNRLTLRKPA----------PPAEGPQAT------SPTVRVLANHVNLPPRSSVFVLVGIDEASCGEVLLEGSLQLLLGRGIGVARGVAELQDGRTVAL-VTNFRNETQHLTKGAAVGHVEKLRNPAEITAITDESSPPQQDSTSPAQLDIDPKLPDPKRRQLANLLAEYRDCFATSSKVRQTAVAKHRIVTEDDARPVHRSPYRVSAKEREVIHQQVQEMLNDDIIQPS---SSPWASPVVLVKKKDGTLRFCVDYRQLNTVTKKDVYPLPRIDDTLDRLRHSRYFSSMDLKSG 429          
BLAST of Gchil6872.t1 vs. uniprot
Match: A0A4D5RZ78_IXOSC (Putative transposon ty3-g gag-pol polyprotein (Fragment) n=1 Tax=Ixodes scapularis TaxID=6945 RepID=A0A4D5RZ78_IXOSC)

HSP 1 Score: 105 bits (262), Expect = 7.570e-22
Identity = 90/323 (27.86%), Postives = 150/323 (46.44%), Query Frame = 0
Query:   22 FLVCPNLGAEAILGTSFIDRYIKAIYPGLNKVAFYRASSDSIIGSALVPEANRKRAVVCENTKSNKVRLSTA-ITIPPMTQIALSVHSQSP--GLVTIQNHPETVLKHLTLTAHGVMDILPNRSFFVTISNFRDKPVRLPKGTVIG-ITLLAPVAIMEAQMDNLATPTPDE------DVD----------------------SWEGRVAIRAAL-------ESYRPQH--PYRTDLKGREIGADQIDKMRKAQVIEPAPPTQSQFPSPLVLVAKKDGSVRFYVDYRKLNAVTKRDSYPIPRMDDCLDSLSETVVFTTLEANSG 303
            F++  +   + ILG  F+  Y   I  G N++               VP + + +      T S  VR++   + +PP + + + V + +     V ++ + + +L      A GV ++   R+  V ++NFR++   L KG  +G +  L   A + A  D  + P  D       D+D                      +   +V   A         +  RP H  PYR  +K RE+  +Q+ +M    +I+P+    S + SP+VLV KKDG++RF VDYR+LNAVTK+D YP+PR+DD LD L  +  F++++  SG
Sbjct:  145 FVILQDCSRDVILGMDFLCEYGAVIDLGENRLTLRTP----------VPPSEKLQ------TASAAVRVAADHVNLPPRSSVVVPVVTDAATRSEVLLEGNLQLLLGRGIGVARGVAELQDGRTA-VLVTNFRNETQHLTKGAAVGHVEDLRNSAEIAAITDESSPPQQDGSSPAQLDIDPKLPDPKRRQLMNLLAEYRDCFATSSKVRQTAVAKHRIITEDDARPVHRSPYRVSVKEREVIQEQVQEMLNDDIIQPS---SSPWASPVVLVKKKDGTLRFCVDYRQLNAVTKKDVYPLPRIDDTLDRLRHSRYFSSMDLKSG 447          
The following BLAST results are available for this feature:
BLAST of Gchil6872.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001E1DB02D7.490e-2555.34uncharacterized protein LOC123543982 n=1 Tax=Merce... [more]
A0A6B0VG70_IXORI1.350e-2327.02Putative retrotransposable element (Fragment) n=1 ... [more]
UPI0019D6F6A42.430e-2329.10reverse transcriptase family protein n=1 Tax=Ricke... [more]
UPI001E1D9CF03.780e-2344.12uncharacterized protein LOC123544487 n=1 Tax=Merce... [more]
A0A4D5RY75_IXOSC1.050e-2228.31Putative transposon ty3-i gag-pol polyprotein (Fra... [more]
A0A4D5RYE1_IXOSC1.310e-2228.17Putative transposon ty3-g gag-pol polyprotein (Fra... [more]
UPI001E1D3E381.660e-2254.26uncharacterized protein LOC123544752 n=1 Tax=Merce... [more]
A0A2R5LEZ4_9ACAR2.290e-2226.65RNA-directed DNA polymerase (Fragment) n=1 Tax=Orn... [more]
A0A4D5S1N0_IXOSC6.760e-2228.17Putative transposon ty3-g gag-pol polyprotein (Fra... [more]
A0A4D5RZ78_IXOSC7.570e-2227.86Putative transposon ty3-g gag-pol polyprotein (Fra... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 277..303
e-value: 7.3E-24
score: 86.2
NoneNo IPR availableGENE3D3.10.10.10HIV Type 1 Reverse Transcriptase, subunit A, domain 1coord: 209..276
e-value: 7.3E-24
score: 86.2
NoneNo IPR availablePANTHERPTHR24559:SF363SUBFAMILY NOT NAMEDcoord: 225..302
NoneNo IPR availablePANTHERPTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINcoord: 225..302
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 207..303

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004376_piloncontigtig00004376_pilon:478794..479816 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6872.t1Gchil6872.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004376_pilon 478794..479816 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6872.t1 ID=Gchil6872.t1|Name=Gchil6872.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=304bp
MDIKGIVPLYLQVGKFKVRTWFLVCPNLGAEAILGTSFIDRYIKAIYPGL
NKVAFYRASSDSIIGSALVPEANRKRAVVCENTKSNKVRLSTAITIPPMT
QIALSVHSQSPGLVTIQNHPETVLKHLTLTAHGVMDILPNRSFFVTISNF
RDKPVRLPKGTVIGITLLAPVAIMEAQMDNLATPTPDEDVDSWEGRVAIR
AALESYRPQHPYRTDLKGREIGADQIDKMRKAQVIEPAPPTQSQFPSPLV
LVAKKDGSVRFYVDYRKLNAVTKRDSYPIPRMDDCLDSLSETVVFTTLEA
NSG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043128Rev_trsase/Diguanyl_cyclase
IPR043502DNA/RNA_pol_sf