Gchil6831.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6831.t1
Unique NameGchil6831.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length776
Homology
BLAST of Gchil6831.t1 vs. uniprot
Match: R7Q1Y8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q1Y8_CHOCR)

HSP 1 Score: 461 bits (1185), Expect = 2.720e-147
Identity = 311/829 (37.52%), Postives = 456/829 (55.01%), Query Frame = 0
Query:    2 EGEDYFGIIAVPDNENEEDAANDLTFGDIGELKAGDDASDAFWKPDHQSLSRRIEEEKEVVQRSRLAPTSSR-----------PVRRDLYENPVPVPPKEQDAEPSTMAWNRLLQAVQGQHA----SHLEKQ----------PVHSSQGQSFSFRNPSISDHTSQLASNAQSQNPPPISPLINP------------QEYERTMIAYYEQQMRQFLIRHDETAELQLREAIVAQNAGVVFDKAKFDEHQEAARQRIVTDFYNRVNQIRYLVWLQTRQLVQRNL--PTWEQSQTATRDDYDLEGQSQKNILETLRPDIRPRLFENGREQTSINLSPTFSDYETNGSARASGA----LQNKTKPNVSRDPIKKAVGMQELERQLMESGIDISPTTKN-DRKMSNAPLDGRETRRYGKKEC------RLESMTDKDQELVFRVHLRQVEAAVTYKDDYYHGMYRRNERLGLGELYSDLAKNVNQMRQRNQLRGTNSRPHRSRRTKH-HTQQNENQASSPVQSSDSSKNGLATALGSVQTWNPKAPRRVMDFSSIERK-AVKGSESKLLRDDERVKVRHEIERGYDVMAVIHDIVRGESSEVLEDQIRNLLETLHIENTHEERADSDIATNPGLR---FFGTLCVLEKGRRYLARVFDILDISERIRVIPSVFESLGVMIYSLQRSRRSYMCG--EGDIVSKCLEAISDFHISAADCIAMLSSFSSTHSARPDAFLTTFRSASGAKLMYCCMQRVSRGLFKKEIGEEDVSRSGVCKLAKVYTEMLQRIFEGAELVNRVWEVTASLDSILTGETRSELRAELKRLLRSGTAPPPP 773
            E EDYFG I+VP +E  EDAANDLTFGDIG++KAGDD SDA WK DH SLS RI+ EKE ++     P               P    L E P P  P  ++     +AWN+L   +   +     SHL  Q          P      Q     +PS+     Q          P ++PL               Q+Y+R ++ +              TA+ QL+EA  AQ AG+ FD+ +FD HQE  RQRI+ D ++R+   + LVW  T+Q++Q++   P  +      R   D           +      P +   G    + ++ P   D +  GSA   G     +     P +S + ++KA  +QE+ERQ+  +G+   P +KN DR    +P+  R T R  + +       RLESMTD+DQE VFR HLRQ+E +V YKDDYY+ +  +  R    ++Y+DLA+ V  +R R++ RG      R R +K  +  ++++Q +S    SD +   LA ALG+VQ+W+P+APRRVMDF  +E++    G   K LRDDERV VR EIERGYD++A IHDI RGES + L   I+ L+ TLH+    E+  D D     G+R   FF T+CV+EKGRRYL+ V ++++  +++R + ++FE+LG+++++ ++S      G  +  + +  ++ + D  I A DC+A+ +SFS++H    DAFLTTFRS  GAK+++ CMQR+S GL    IGEED+S SG+    + +TE L  +F+GAE  +RVWE  ASLD++  G+TR+  R+EL RL+ +GT P PP
Sbjct:    3 EAEDYFGDISVPLDETNEDAANDLTFGDIGDIKAGDD-SDAAWKSDHVSLSERIQAEKEALRHKAATPDRQPAPDKQFPPFVFPSLNLLAEEPRPPQPLPENPR---VAWNQLQHDLNRSNEQPVQSHLSAQRISQLLQPGPPPPQVPRQVPMHMHPSLQPLQQQQXXXXXXXLRPGLTPLAGHRPQIPARSQAAIQDYQRRLMTHQXXXXXXXXXXXXXTADKQLQEAQRAQQAGITFDRKEFDRHQEGTRQRILLDHHSRLRHSQMLVWQMTQQVIQQSAERPIEQTPVLDLRRRVDPASPPHAGYARSPVDSFFPAMASLGEPAVNASMRPNGRD-QARGSAHVEGQQSSIISAPRMPKLSDEELQKAPRLQEIERQMAAAGL--GPNSKNTDRDTFGSPV--RRTERSPQAQVKKTSQRRLESMTDRDQEWVFRAHLRQIETSVVYKDDYYNSVLTKKLRESNPDIYADLAERVQALRVRDKERGAYGNSMRIRGSKRGNAGKDDSQLASSAHHSDQNTRALANALGTVQSWHPRAPRRVMDFGLLEKRDTADGLPQKSLRDDERVHVRQEIERGYDIIATIHDIARGESHKSLGPTIQTLMSTLHLA---EKMGDEDRGERDGVRSTRFFATMCVIEKGRRYLSHVLELVEDGDKVRAMCAIFENLGMLVFASRKSSGKATIGGSQKGLFAIMMKIVQDPDIRAQDCLAIFNSFSTSHVPHRDAFLTTFRSGVGAKIVFLCMQRISAGLAMHVIGEEDISASGIDGFTQGFTEALPDVFKGAESESRVWEAMASLDALSRGDTRATYRSELHRLMLAGTVPNPP 819          
BLAST of Gchil6831.t1 vs. uniprot
Match: A0A5J4Z7F6_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z7F6_PORPP)

HSP 1 Score: 67.8 bits (164), Expect = 5.810e-8
Identity = 65/218 (29.82%), Postives = 99/218 (45.41%), Query Frame = 0
Query:  369 YGKKECR--LESMTDKDQELVFRVHLRQVEAAVTYKDDYYHGMYRRNERLGLGELYSDLAKNVNQMRQRNQLRGTNSRPHRSRRTKHHTQQNENQASSPV-----QSSDSSKNG--LATALGSVQTWNPKAPRRVMDFSSIERKA------------------------------VKGSESKLLRDDERVKVRHEIERGYDVMAVIHDIVRGESSEVL 547
            YG+ E    L  MT +D + V RVHLRQ+E    Y DDYY   +     L + +L   +A + +     N+ R                Q+    A+ PV     + + S++N   L+TALG+++TW PKAPR+++  S   R A                              +K +   LLR+DERV+ R  IE GYD+ A + DI RG+ + ++
Sbjct:  186 YGRDENSFPLIGMTARDLDTVVRVHLRQLETQDDYVDDYYLLQFCARNNLSVDDLQVRMAVSSSFSNFVNRARAAA------------LQRASEGAAQPVTDATLKEAHSARNIELLSTALGTLRTWTPKAPRKLVSVSDEGRSADADDAAALSSLNPLAGLASLGGTLEKRRAVLKQNSVALLREDERVRARSLIEAGYDIFAELRDIERGQLTGIV 391          
BLAST of Gchil6831.t1 vs. uniprot
Match: M2XKF2_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XKF2_GALSU)

HSP 1 Score: 67.0 bits (162), Expect = 9.760e-8
Identity = 99/411 (24.09%), Postives = 178/411 (43.31%), Query Frame = 0
Query:  379 MTDKDQELVFRVHLRQVEAAVTYKDDYYHGMYRRNERLGLGELYSDLAKNVNQMRQRNQLRGTNSRPHRSRRTKHHTQQNENQASSPVQSSDSSKNGLATALGSVQTWNPKAPRRVMDF-------SSIERKAVKGSESKLLRDDERVKVRHEIERGYDVMAVIHDIVRGESS--EVLEDQI---RNLLETLHI---ENTHEERADSDIATNPGLRFFGTLCVLEKGRRYLARVFDILDISERIRVIPSVFESLGVMIYSLQRSRRSYMCGEGDIVSKCLEAISDFHISAADCIAMLS----SFSSTHSARPDAFLTTFRSASGAKLMYCCMQRVSRGLFKKEIGEEDVSRSGVCKLAKVYTEMLQRIFEGAELVNR------VWEVTASLDSILTGETRSELRAELKRLL 764
            MT  + EL+ ++H+RQ+E +    +D+Y   YR+ E+           ++  Q+++    R T  +  RS    HH++ N                 L  ALGS+Q +NP APRR++         SS+ER     +++    +D R+  +  I   +D++  + D +   SS  E+ E +    R LL T  I   EN  +E  +           F  +C L KGR+ L R F +L  +    ++  +  SLG++   L+R+ ++ +  E     + +E++  F I   D I++L+    SF+  H    + FL    + S   L+   +               D SR    K+  +   + +R+    E + +      VW++ A LD  +    R +LR  +K+L+
Sbjct:  283 MTCSEIELIAKMHIRQLETSSWPVEDFYCQAYRQKEQ----------RRSEEQLKEYPYSRDTKKKTLRSGYFPHHSENN--------------LKILERALGSIQGYNPNAPRRMVQVALESVSDSSLERDEAHVTDTPF-HEDSRIAAQSVISLAFDILFDLEDELSVYSSVAELEEHKTKMSRKLLNTFGITVDENLRDETRN----------IFSRICALPKGRKLLIRCFSVLPRTYLTPLLNMILFSLGMI---LKRTSKAQL--EEPSWQQFVESVMHF-IEETDDISVLTEWTHSFAVGHQENKN-FLFVITTGSSLSLVVTLLFSAC---------SLDSSRQPPLKM--LLNRLCERLILSVEEMFKHVEHSIVWQLVALLDGFVDTMLREKLRMIIKKLI 640          
The following BLAST results are available for this feature:
BLAST of Gchil6831.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
R7Q1Y8_CHOCR2.720e-14737.52Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A5J4Z7F6_PORPP5.810e-829.82Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
M2XKF2_GALSU9.760e-824.09Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 429..485
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 303..320
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 457..485
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 49..64
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 101..152
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 49..159
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 303..324

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004376_piloncontigtig00004376_pilon:224601..226928 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6831.t1Gchil6831.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004376_pilon 224601..226928 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6831.t1 ID=Gchil6831.t1|Name=Gchil6831.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=776bp
MEGEDYFGIIAVPDNENEEDAANDLTFGDIGELKAGDDASDAFWKPDHQS
LSRRIEEEKEVVQRSRLAPTSSRPVRRDLYENPVPVPPKEQDAEPSTMAW
NRLLQAVQGQHASHLEKQPVHSSQGQSFSFRNPSISDHTSQLASNAQSQN
PPPISPLINPQEYERTMIAYYEQQMRQFLIRHDETAELQLREAIVAQNAG
VVFDKAKFDEHQEAARQRIVTDFYNRVNQIRYLVWLQTRQLVQRNLPTWE
QSQTATRDDYDLEGQSQKNILETLRPDIRPRLFENGREQTSINLSPTFSD
YETNGSARASGALQNKTKPNVSRDPIKKAVGMQELERQLMESGIDISPTT
KNDRKMSNAPLDGRETRRYGKKECRLESMTDKDQELVFRVHLRQVEAAVT
YKDDYYHGMYRRNERLGLGELYSDLAKNVNQMRQRNQLRGTNSRPHRSRR
TKHHTQQNENQASSPVQSSDSSKNGLATALGSVQTWNPKAPRRVMDFSSI
ERKAVKGSESKLLRDDERVKVRHEIERGYDVMAVIHDIVRGESSEVLEDQ
IRNLLETLHIENTHEERADSDIATNPGLRFFGTLCVLEKGRRYLARVFDI
LDISERIRVIPSVFESLGVMIYSLQRSRRSYMCGEGDIVSKCLEAISDFH
ISAADCIAMLSSFSSTHSARPDAFLTTFRSASGAKLMYCCMQRVSRGLFK
KEIGEEDVSRSGVCKLAKVYTEMLQRIFEGAELVNRVWEVTASLDSILTG
ETRSELRAELKRLLRSGTAPPPPQR*
back to top