Gchil6920.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6920.t1
Unique NameGchil6920.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length472
Homology
BLAST of Gchil6920.t1 vs. uniprot
Match: A0A2V3IMM4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMM4_9FLOR)

HSP 1 Score: 307 bits (787), Expect = 3.980e-96
Identity = 213/492 (43.29%), Postives = 297/492 (60.37%), Query Frame = 0
Query:    1 MAPKQFYQDEKVLDQLLDNLLQTGQNENSSVFAPMNDNSN---NFSQSSIHEKLATASGLLEESKICPGLPSLDDNEHNIREVLAYALTAVIQLCKCCNANANLRNEAERSVLVVNEELLRLKRLNEVKKEKILRLDTKIMSMKKQVSDIEKEKNLLVSNLTTECTELKTKCARSAYRVNHLSLEAKKREREYSQLQQRVHSLMAKTKRLSIEPQIVAIAGNNSTKAPCISRDKSLETEEREYQDLVGLSEDNSMNEVIVENKALRDLLRAVQEELDDCLISNPNLIVDPKTPTIKSSKKGITMDGEKVTGARSAEVSSSENVC----SPQRGDQTSIQKNDQEDA---LDGQAYKQTTGDEHR-KYTSAKEPKTPTEATY--CPSPIDMRENSGLKIDANQIQHQ-QKNSISPTLVADAEVGTPVT------------GSPVRSGTLLSNLAPALSAEQMNLPFDMIRENLERSFDQKFELLRLAVLQVGS 466
            MAP+Q Y+DEK L  LLDNLLQTGQ+  S         S+   + + ++I +++ATA+  L ESK+C  LPSL++ ++NIREVLA ALTA+++L KCC AN  LR+EAE SVL  + E+ R+K+L+E  + K  RL+++ +S++   S+ +++   +V  LTT+CT+LKTKCA S YRVNHL+LE KKREREY+QLQQRVHSLM  +KRLSIEPQIVA   N+    P ISR +SL+ EE+ Y++   LSE+   +EV+ EN+A RDLLRA+QEELDD L+SN     +PK PT  S    +  + E +    SA+  +S N      SP   ++ S+    Q+         ++  TT  E + +  S +E     EAT    PS  D REN+  +   N +Q   + +S   T    A+  T V             G P     +LS + PAL+ EQMNLPF+MIR +LE+S  QKF  LR  VL + +
Sbjct:    1 MAPRQLYRDEKALGSLLDNLLQTGQSNGSGPLGVNITESHAEQHITGATIKDEIATANTFLAESKLCSLLPSLENGDNNIREVLASALTAIVRLSKCCKANMKLRSEAEHSVLTAHVEIDRVKKLHEAAQAKTNRLESQNVSLRNAASESDQKNKRVVRKLTTDCTDLKTKCANSNYRVNHLTLEVKKREREYTQLQQRVHSLMTHSKRLSIEPQIVATVANDIGNHP-ISRGRSLQKEEKAYEESTELSENQFRDEVMSENQAFRDLLRAIQEELDDLLVSNSGAFHEPKRPT--SGLTELRQENETIKENGSAKSPNSTNGTDASGSPSENEEDSLSHLRQDSGSRECSPNSHALTTFPEAKSELGSCEEKPEMEEATQPVLPSSND-RENAEPRPPPNAMQSTTESDSCDRTTYEIAKSVTNVESDFEDCKKGTDPGHPESHEDVLSGVTPALTVEQMNLPFEMIRADLEQSLKQKFGRLRDVVLGMST 488          
BLAST of Gchil6920.t1 vs. uniprot
Match: R7QIY3_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIY3_CHOCR)

HSP 1 Score: 156 bits (394), Expect = 8.720e-40
Identity = 105/318 (33.02%), Postives = 167/318 (52.52%), Query Frame = 0
Query:    1 MAPKQFYQDEKVLDQLLDNLLQTGQNENSSVFAPMNDNSNNFSQSSIHEK-----LATASGLLEESKICPGLPSLDDNEHNIREVLAYALTAVIQLCKCCNANANLRNEAERSVLVVNEELLRLKRLNEVKKEKILRLDTKIMSMKKQVSDIEKEKNLLVSNLTTECTELKTKCARSAYRVNHLSLEAKKREREYSQLQQRVHSLMAKTKRLSIEPQIVAIAGNN------STKAPCISRDKSLETEEREYQDLVGLSEDNSMNEVIVENKALRDLLRAVQEELDDCLISNPNLIVDPKTPTIKSSKKGITMDGEKVT 307
            MAPK  YQD+  L   LD L+Q+  ++ + V    +  S +  +  +  +     ++ A+ LL E   CP LP L +N  NI  VLA AL+ +++L +CC AN +LR +AE        +  RL R+  + K+K+ + +  ++  K ++ + E +    V+ LT E   L+T+ A    ++N L+LEAKKRER+Y+ LQQRVH+LM+ +K+LSIEP I    GN         K+     D  LE +  E  +  G+        ++VEN + R LL ++Q E+DD +    +       P  +SS+     DGE+ T
Sbjct:    1 MAPKDVYQDDGSLSNFLDGLIQSASDDRADVLGIESQTSPSEPKPPVEPERLVHGISVANDLLREGGQCPPLPFLTENNENIDRVLAAALSTIVRLSRCCKANVSLRVDAENRFQATQIDADRLSRVLHITKDKVTKREGDVVGAKNKLRETEAKNRRKVAQLTAESNSLRTRLAAGEGQINQLNLEAKKRERQYTHLQQRVHALMSNSKKLSIEPAITRGEGNKVKHFHYQRKSSQTGDDSELEVDTDEEVNAAGV--------LLVENNSFRRLLHSIQVEMDDIIGGYTSAFKFLHPPNEQSSETSDVSDGEEET 310          
The following BLAST results are available for this feature:
BLAST of Gchil6920.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IMM4_9FLOR3.980e-9643.29Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QIY3_CHOCR8.720e-4033.02Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 252..272
NoneNo IPR availableCOILSCoilCoilcoord: 130..150
NoneNo IPR availableCOILSCoilCoilcoord: 176..203
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 308..363
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 310..343
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 347..361

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004376_piloncontigtig00004376_pilon:694604..696019 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6920.t1Gchil6920.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004376_pilon 694604..696019 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6920.t1 ID=Gchil6920.t1|Name=Gchil6920.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=472bp
MAPKQFYQDEKVLDQLLDNLLQTGQNENSSVFAPMNDNSNNFSQSSIHEK
LATASGLLEESKICPGLPSLDDNEHNIREVLAYALTAVIQLCKCCNANAN
LRNEAERSVLVVNEELLRLKRLNEVKKEKILRLDTKIMSMKKQVSDIEKE
KNLLVSNLTTECTELKTKCARSAYRVNHLSLEAKKREREYSQLQQRVHSL
MAKTKRLSIEPQIVAIAGNNSTKAPCISRDKSLETEEREYQDLVGLSEDN
SMNEVIVENKALRDLLRAVQEELDDCLISNPNLIVDPKTPTIKSSKKGIT
MDGEKVTGARSAEVSSSENVCSPQRGDQTSIQKNDQEDALDGQAYKQTTG
DEHRKYTSAKEPKTPTEATYCPSPIDMRENSGLKIDANQIQHQQKNSISP
TLVADAEVGTPVTGSPVRSGTLLSNLAPALSAEQMNLPFDMIRENLERSF
DQKFELLRLAVLQVGSKSPRA*
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