Gchil6882.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6882.t1
Unique NameGchil6882.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length219
Homology
BLAST of Gchil6882.t1 vs. uniprot
Match: A0A2V3IP16_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IP16_9FLOR)

HSP 1 Score: 254 bits (649), Expect = 6.120e-83
Identity = 118/172 (68.60%), Postives = 144/172 (83.72%), Query Frame = 0
Query:   24 LPQDELFQIIDESGEGFGFDLTPEALAKPFAIGATSVFSLGMLAGIPLGLAMARSQESKGTSRQIRPSLEGVKFAATTFGLGTLLCGAMGVAGFYGLKTYYGVESFEEFGLKMRQVVPQKRSEMENGFGPALRFIRRNAGDNLPGPMKSLREKFRESRLGSWIKQQVDLTIV 195
            +P+ ELFQIIDE+GEGFGFDLTPE LAKPFAIGA S+F+LGM+AGIP GLAM RSQE+KG+S++I P++ G++FAATTFGLGTLLC  MG AGFYG+KTYY V SFEEFG  MR+ VP +R+EME G  P L F+R+NAG+NLPGPMKS R+ F  +RLG WIK+QVD ++ 
Sbjct:   22 IPEGELFQIIDETGEGFGFDLTPETLAKPFAIGAVSLFTLGMMAGIPFGLAMGRSQETKGSSKKITPTMGGIRFAATTFGLGTLLCSMMGAAGFYGIKTYYHVNSFEEFGRVMRETVPDRRAEMEKGLAPVLAFVRKNAGENLPGPMKSFRDWFHVTRLGKWIKRQVDSSVT 193          
BLAST of Gchil6882.t1 vs. uniprot
Match: R7QVH3_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QVH3_CHOCR)

HSP 1 Score: 159 bits (403), Expect = 1.370e-46
Identity = 76/126 (60.32%), Postives = 98/126 (77.78%), Query Frame = 0
Query:   75 MARSQESKGT---SRQIRPSLEGVKFAATTFGLGTLLCGAMGVAGFYGLKTYYGVESFEEFGLKMRQVVPQKRSEMENGFGPALRFIRRNAGDNLPGPMKSLREKFRESRLGSWIKQQVDLTIVEE 197
            M R+QE  G    +R++RPSL+G+KFAATTFGLGTLLCGAMGVAGFYG+K  Y VESFEEFG+ MR  VP KR +ME G  P L  +R+NAGD+LP PM+ L+E F  S+ GSW+++QV+ ++VE+
Sbjct:    1 MGRTQEGDGKGIKTRKVRPSLDGLKFAATTFGLGTLLCGAMGVAGFYGIKRCYAVESFEEFGMVMRDAVPVKRQQMETGLKPILDKVRQNAGDSLPAPMRKLQELFLSSKFGSWVREQVEFSVVEQ 126          
BLAST of Gchil6882.t1 vs. uniprot
Match: A0A7S0ZLF0_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZLF0_9RHOD)

HSP 1 Score: 99.0 bits (245), Expect = 5.370e-22
Identity = 64/175 (36.57%), Postives = 88/175 (50.29%), Query Frame = 0
Query:   26 QDELFQIIDESGEGFGFD--LTPEALAKPFAIGATSVFSLGMLAGIPLGLAMAR---------------SQESKGTSRQI---RPSLEGVKFAATTFGLGTLLCGAMGVAGFYGLKTYYGVESFEEFGLKMRQVVPQKRSEMENGFGPALRFIRRNAGDNLPGPMKSLREKFRES 180
            ++E FQI  E+   F  D   +P  +A P    +  +F +G++ GIP GLA  R               S++SKG+ +       S  G++FA  +F  GT LCGA G A  YG+  YY V S EEF  KMR V+PQKR  ++N   P L  IR  A +  P  + SL   F+ S
Sbjct:   13 EEEPFQIQIEAPADFNVDEAFSPSRMAAPLLFVSGGLFMIGLMGGIPAGLAYGRAAMDDDDKKLGKTKKSKDSKGSIKGDITGASSKSGLRFAVLSFLYGTALCGAFGCAMVYGVHKYYEVNSIEEFVEKMRVVIPQKRKNLQNSIDPILNSIRNTATNTFPNIVNSLTLSFQSS 187          
BLAST of Gchil6882.t1 vs. uniprot
Match: A0A7S1XFY2_9RHOD (Transmembrane protein 242 n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XFY2_9RHOD)

HSP 1 Score: 87.0 bits (214), Expect = 3.600e-18
Identity = 48/121 (39.67%), Postives = 70/121 (57.85%), Query Frame = 0
Query:   83 GTSRQIRPS--LEGVKFAATTFGLGTLLCGAMGVAGFYGLKTYYGVESFEEFGLKMRQVVPQKRSEMENGFGPALRFIRRNAGDNLPGPMKSLREKFRESRLGSWIKQQVDLTIVEEEAHQ 201
            G + ++ P+   +G ++A    G GTLLC AMGV G  G++  Y V+S +EFG +MR++VP+KR  ME    P L  +RR A   LP    + RE   +SR+G WI  +V  T  +  AH+
Sbjct:   17 GGTTELSPAQLADGARWALRALGYGTLLCAAMGVVGVVGIRHVYQVDSIQEFGERMREIVPKKRRAMEQKLDPVLTPVRRMARSTLPDWFATRREAVLDSRMGRWIASRV-RTSTDYRAHE 136          
The following BLAST results are available for this feature:
BLAST of Gchil6882.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IP16_9FLOR6.120e-8368.60Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QVH3_CHOCR1.370e-4660.32Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S0ZLF0_9RHOD5.370e-2236.57Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A7S1XFY2_9RHOD3.600e-1839.67Transmembrane protein 242 n=1 Tax=Compsopogon caer... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 196..218
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 121..218
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 77..96
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..52
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 53..76
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 97..120
NoneNo IPR availableTMHMMTMhelixcoord: 54..76
NoneNo IPR availableTMHMMTMhelixcoord: 97..119

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004376_piloncontigtig00004376_pilon:582506..583162 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6882.t1Gchil6882.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004376_pilon 582506..583162 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6882.t1 ID=Gchil6882.t1|Name=Gchil6882.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=219bp
MTAAKQKTSDPGKCPGPGTDDQPLPQDELFQIIDESGEGFGFDLTPEALA
KPFAIGATSVFSLGMLAGIPLGLAMARSQESKGTSRQIRPSLEGVKFAAT
TFGLGTLLCGAMGVAGFYGLKTYYGVESFEEFGLKMRQVVPQKRSEMENG
FGPALRFIRRNAGDNLPGPMKSLREKFRESRLGSWIKQQVDLTIVEEEAH
QNTDSGEERSKQGHSQNE*
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