Gchil6904.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6904.t1
Unique NameGchil6904.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length96
Homology
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BLAST of Gchil6904.t1 vs. uniprot
Match: R7QUI9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QUI9_CHOCR)

HSP 1 Score: 67.0 bits (162), Expect = 1.360e-12
Identity = 45/94 (47.87%), Postives = 50/94 (53.19%), Query Frame = 0 
Query:    1 MGNTCCCGDGLTTTARTSSAAEKQHRAPNKDAPPARIVMTPSAPTRREQQLRAAEERARQGAVRGTQRTQPRAKRKSPSPSEGDGAGRADINDW 94
            MGN CC GD L    R + A            PP   VMTP+   RR Q L AAEERAR GAVRGTQRTQP+ K K    +   G    DI+DW
Sbjct:    5 MGNLCCGGDDLEVNNRKTVAG----------GPPVPQVMTPTEDERRRQALVAAEERARLGAVRGTQRTQPKPKPKVYENNAPLGKSGPDISDW 88
The following BLAST results are available for this feature:
BLAST of Gchil6904.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R7QUI9_CHOCR1.360e-1247.87Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004376_piloncontigtig00004376_pilon:651375..651853 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6904.t1Gchil6904.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004376_pilon 651375..651853 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6904.t1 ID=Gchil6904.t1|Name=Gchil6904.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=96bp
MGNTCCCGDGLTTTARTSSAAEKQHRAPNKDAPPARIVMTPSAPTRREQQ
LRAAEERARQGAVRGTQRTQPRAKRKSPSPSEGDGAGRADINDWL*
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