Gchil7340.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7340.t1
Unique NameGchil7340.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length241
Homology
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BLAST of Gchil7340.t1 vs. uniprot
Match: A0A2V3J6W9_9FLOR (BAH domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6W9_9FLOR)

HSP 1 Score: 381 bits (978), Expect = 3.760e-132
Identity = 180/241 (74.69%), Postives = 203/241 (84.23%), Query Frame = 0 
Query:    1 MVNRKRTISELRTTEVVTSEPVLLGQGKWCSRQKLRVYPGVDYLGTRFRTGDHVAMYTGDKSGGREWICVLETLYKDPEDSCAKFKGRWFWSVQDVKDHKREDSEQMRPSKCESHELISCDNRDTNLVESISRKACILSYDNFHLVRRTVLKSDSPWKKIYFCERQFYHKAHRFSELNSILFPGDPIPSDLRKAAGLPLLEHAEL-SDVDHENAYYEPKLADSTKRKTPNDKSASEPILLW 240
            MVNRKRTISE+R TEVVT+EPVL+G GKW  + K  VYP VDYLG RFR GDHVAMYTGDK  GREW+CVLETL+KD ED  AKFKGRWFWS+QDVK+HKRED E+MR SKCESHELI CDNRDTNLVESISRKA ILSYDNF LV+R VLK+DSPWK+ YFCERQFYHKAHRFSELNSILFPGDPIP DLRKAAGL   E  EL S+VD+++AY+EP+ +  + RK  N+  + EP+LLW
Sbjct:    1 MVNRKRTISEMRQTEVVTAEPVLVGAGKWSPKHKALVYPAVDYLGMRFRIGDHVAMYTGDKGDGREWVCVLETLFKDREDDTAKFKGRWFWSIQDVKEHKREDGEEMRASKCESHELICCDNRDTNLVESISRKAHILSYDNFQLVKRVVLKNDSPWKRTYFCERQFYHKAHRFSELNSILFPGDPIPKDLRKAAGLSPQEDTELESEVDYDDAYHEPEYSVRSNRKPRNENLSGEPVLLW 241
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BLAST of Gchil7340.t1 vs. uniprot
Match: R7Q0W8_CHOCR (BAH domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q0W8_CHOCR)

HSP 1 Score: 274 bits (701), Expect = 6.540e-90
Identity = 138/253 (54.55%), Postives = 184/253 (72.73%), Query Frame = 0 
Query:    1 MVNRKRTISE--LRTTEVVTSEPVLLGQGKWCSRQKLRVYPGVDYLGTRFRTGDHVAMYTGDKSGGREWICVLETLYKDPEDSCAKFKGRWFWSVQDVKDHKREDSEQMRPSKCESHELISCDNRDTNLVESISRKACILSYDNFHLVRRTVLKSDSPWKKIYFCERQFYHKAHRFSELNSILFPGDPIPSDLRKAAGLP-----LLEHAELSDVDHENAYYEPKLADSTKRK-----TPNDKSAS-EPILLW 240
            MVNRKR +SE      E+VT+EPVL+    + ++ +L ++  VDYLGTRFR GDHVAMY+ +   G+EW+CV+E L+++P+    KFKGRWFWSVQD+  HK + +E MRPSKCESHE++ CDNRDTNLVESI+RK  +LS +NF LV++ V K  S W K+YFCERQ+YH+AHRFSELN++LFPGDPIP +LR AAGLP     +LE+ E  +V +EN Y EP+L    KRK     +  D++ + +P L+W
Sbjct:    1 MVNRKRHLSEDPHLAPEIVTTEPVLVPPACYNTKLQLDLFQAVDYLGTRFRVGDHVAMYSDE---GKEWVCVIEQLFEEPKSGKPKFKGRWFWSVQDIILHKDDMAEVMRPSKCESHEILCCDNRDTNLVESITRKCQVLSNENFQLVKKVVTKLGSRWSKVYFCERQYYHRAHRFSELNAMLFPGDPIPRELRAAAGLPEVAPTMLEYQE--NVAYENGYSEPELHPHAKRKGITVESEKDETVNADPFLIW 248
The following BLAST results are available for this feature:
BLAST of Gchil7340.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J6W9_9FLOR3.760e-13274.69BAH domain-containing protein n=1 Tax=Gracilariops... [more]
R7Q0W8_CHOCR6.540e-9054.55BAH domain-containing protein n=1 Tax=Chondrus cri... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043151Bromo adjacent homology (BAH) domain superfamilyGENE3D2.30.30.490coord: 30..237
e-value: 6.3E-18
score: 67.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 216..240
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 216..231
IPR001025Bromo adjacent homology (BAH) domainPROSITEPS51038BAHcoord: 46..178
score: 12.254901

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000007_piloncontigtig00000007_pilon:530880..531602 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7340.t1Gchil7340.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000007_pilon 530880..531602 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7340.t1 ID=Gchil7340.t1|Name=Gchil7340.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=241bp
MVNRKRTISELRTTEVVTSEPVLLGQGKWCSRQKLRVYPGVDYLGTRFRT
GDHVAMYTGDKSGGREWICVLETLYKDPEDSCAKFKGRWFWSVQDVKDHK
REDSEQMRPSKCESHELISCDNRDTNLVESISRKACILSYDNFHLVRRTV
LKSDSPWKKIYFCERQFYHKAHRFSELNSILFPGDPIPSDLRKAAGLPLL
EHAELSDVDHENAYYEPKLADSTKRKTPNDKSASEPILLW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043151BAH_sf
IPR001025BAH_dom