Gchil4234.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil4234.t1
Unique NameGchil4234.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length315
Homology
BLAST of Gchil4234.t1 vs. uniprot
Match: A0A2V3J182_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J182_9FLOR)

HSP 1 Score: 405 bits (1040), Expect = 1.200e-133
Identity = 205/314 (65.29%), Postives = 246/314 (78.34%), Query Frame = 0
Query:    3 SYRPRRLSRNVADAMAHIWEKFWKDDVRLIAKIIQKRLSQLSPYFRRFVAHLIAFWGSVTYIRRALAAFIRILNRDERVRELLQRIGWASATTLKIFLSICSMLMSATLQFYHLMRDRVIPDIHRLIPIAYYKLVRSLLRLSDHSPWALMLGPFSVQFGIDNHKLPDAYLLHDKLGINRDDVTFATVNGLAHSIRQTV----DMYRTRRGMRTAAEXXXXXXXXXXXXXXXXXESVSEVGSHEYAGSESTPVHSHSTDEEPCPAPSMYSGPQYHKSSKRSKDRSLRRSLGPLTETTNHDDSDWHRSQNKHRHTH 312
            +Y+  RLSRNVADAM++IWE+FWKDDVRLIAKII  R+SQL+PY RRF+AH++AFWG+VTYIRRALAAFIRILNRDERVREL+QRIGWASATT+K+FLSIC ML+SATLQ YHLMRD+VIPD+ R++PI YYK V  L  +S HSPW+++ GPFS +F ID+ KLP+ Y LHDKLG++RDDVTFATVN LA SIR TV    +MYRTRRG++ ++                   S SEV S EY  SESTPVH+ ST+E+P PAP+MYSGPQYH  SK+SK +S RRS GPL E TN DD +WH+  N HRH H
Sbjct:  414 AYKTERLSRNVADAMSNIWERFWKDDVRLIAKIIHNRVSQLAPYLRRFIAHVVAFWGNVTYIRRALAAFIRILNRDERVRELMQRIGWASATTVKVFLSICGMLLSATLQIYHLMRDKVIPDLRRVVPIVYYKFVMGLTTVSQHSPWSILFGPFSFEFAIDSKKLPEVYFLHDKLGVDRDDVTFATVNDLADSIRHTVANTVEMYRTRRGVQPSSMEYEADHEQG---------SESEVESEEYIASESTPVHTQSTEEDPFPAPTMYSGPQYHAVSKQSKRQSHRRSFGPLAEKTNQDDREWHQP-NAHRHMH 717          
BLAST of Gchil4234.t1 vs. uniprot
Match: R7Q7X0_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7X0_CHOCR)

HSP 1 Score: 297 bits (760), Expect = 3.490e-91
Identity = 156/313 (49.84%), Postives = 207/313 (66.13%), Query Frame = 0
Query:    2 FSYRPRRLSRNVADAMAHIWEKFWKDDVRLIAKIIQKRLSQLSPYFRRFVAHLIAFWGSVTYIRRALAAFIRILNRDERVRELLQRIGWASATTLKIFLSICSMLMSATLQFYHLMRDRVIPDIHRLIPIAYYKLVRSLLRLSDHSPWALMLGPFSVQFGIDNHKLPDAYLLHDKLGINRDDVTFATVNG---LAHSIRQTVDMYRTRRGMRTAAEXXXXXXXXXXXXXXXXXESVSEVGSHEYAGSESTPVHSHSTDEEPCPAPSMYSGPQYHK--------------SSKRSKDRSLRRSLGPLTETTNHD 297
            F +R  RLS+NVADAMA++W++FW +DV+ I+ II+ R SQL PY +RFVAHL+AFWG +TY+RRAL AF+RILNRDER+RELL+R+GWASATT+K+FLSIC M+M ATLQ Y+LMR+++IPD  R+IPI YYK V  LL+L++HSPWAL+LGPFS+ F ID+ K+PD Y LH+KL +  +DVTFA+ +G   L  S+R+++  +RTR G                                 Y   +STPVH+ +TDE P P PS Y+  Q+ +              +SK  K+   R    PLTE TNHD
Sbjct:  502 FVFRTERLSKNVADAMANVWDRFWSEDVKQISGIIKNRFSQLLPYMKRFVAHLVAFWGGITYLRRALTAFVRILNRDERIRELLERVGWASATTVKVFLSICGMVMQATLQMYYLMRNKIIPDTRRVIPIVYYKAVVKLLKLAEHSPWALVLGPFSLTFAIDSSKIPDRYFLHNKLSVPEEDVTFASADGVQTLVQSVRESI--HRTRYG---------------------------------YGSQQSTPVHTQTTDEMPYPPPSEYTVSQFPEENNIEIEQHXXXXXASKHVKETVSR--YAPLTERTNHD 777          
The following BLAST results are available for this feature:
BLAST of Gchil4234.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J182_9FLOR1.200e-13365.29Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q7X0_CHOCR3.490e-9149.84Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 207..314
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 220..235
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 118..314
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 76..95
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 50..75
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..49
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 96..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004373_piloncontigtig00004373_pilon:1589346..1590290 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil4234.t1Gchil4234.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004373_pilon 1589346..1590290 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil4234.t1 ID=Gchil4234.t1|Name=Gchil4234.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=315bp
MFSYRPRRLSRNVADAMAHIWEKFWKDDVRLIAKIIQKRLSQLSPYFRRF
VAHLIAFWGSVTYIRRALAAFIRILNRDERVRELLQRIGWASATTLKIFL
SICSMLMSATLQFYHLMRDRVIPDIHRLIPIAYYKLVRSLLRLSDHSPWA
LMLGPFSVQFGIDNHKLPDAYLLHDKLGINRDDVTFATVNGLAHSIRQTV
DMYRTRRGMRTAAEEHHVSHEEEEDDDDDDDESVSEVGSHEYAGSESTPV
HSHSTDEEPCPAPSMYSGPQYHKSSKRSKDRSLRRSLGPLTETTNHDDSD
WHRSQNKHRHTHHE*
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