Gchil3812.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil3812.t1
Unique NameGchil3812.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length1326
Homology
BLAST of Gchil3812.t1 vs. uniprot
Match: A0A2V3J364_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J364_9FLOR)

HSP 1 Score: 1028 bits (2658), Expect = 0.000e+0
Identity = 531/1112 (47.75%), Postives = 752/1112 (67.63%), Query Frame = 0
Query:   23 SRPAIVAATWPPALSAFTPHNLTVVVSAPLLRPRFQVLSTPPQNLFPVSTTPTSSGTVALLFRLPALPPSRPQWQLRIFHNNSDSFLTHPSNRRLNIRLPPLIRSIHPRVLHPFRTSLILLTGNFPPDPRIFIANRRIPPRRIPSISPTEIIVRVSPSFSVSQLSIFVLAVDGVSSPIFNISVRRDLIPISLAPLHASYQYSAAHYILSSLCTNSTAVVHFQAHTLPNPQVPVFNVSYRTSAMSPASFRRLQTFSSSTVLALPHHIFSESHQSDRVVTVVITCAHAGRIGQTILFISQRTSAQVFGISVFPHVHQMVPLQSTAVLRASFSSIYCPKTADTSVQLIWRVNNTIVHPLQNTSKSLHAIVRPVTTGLGNTLIVPTEGRFVYVVQAVLQHTVTRRVIARAAATGVAVVRKNFPSFQAVLNGASTAITLPPEIKDYPIRVDVYEQSQYGALLVSPARFMFQWSCTMVLDDVTSPCTSQLFSPWLATESSTTSNFQISTVGVEAGTRVEYSVLVYNELSATQRLNLTLNIAVQENTLVFPSDAKLGSASTYPSRRVINEGPVFECFESIILSWNQKISEPLDFKLFREGQLTDILSNGTEGLIVPYDGYWTRERRFGRFFAVSASILGAGRFVLHGAVNRTAGPGVGMSWRFSVEGCATLILSNLPITDGTANVTVFHAAAYSLPSSDKLYAFMLRP--ESPNMDEASISSDGRQNVAFDLSACLDGCTGKPAVSFTVRRAGRYRIAVKMYDPSGMYLLGSETSNSTIIVTDSDDIDAQTLGGSVAEFLNSSVLHRDESRFFDFLQSIQNGTTSLETSVVDLVTATLKLVVFSPAVNALQCTQYVEACGRVLGLEALNVSA-LESTLTIIDAAVQQSVSSGSVGFHLRQALKDFYGSATEMVHKMAQGGDSRDAESG-DEIKEMADRTRNSAALSIPMVLSAGRACGVVDSERVYLKGTVGLKDGGGAGTVEAFDEYRIGVSCFAGQIKKLGPEPATVHTCGEERGLIRGEDEEMYVLSSVEQHNVLETEVGASTLAGPQMNARLYKRVKQRGNMHLVKISESCCGCYRTRVSVYATQAVSETFSLVGDGKRVTCRGGGTVTEWTRHQ 1130
            ++P +++      L+A+ PH L+V +S P+  PR Q+ ++PP  LFP S +  ++    L F++P LP S PQW++   HNN+   L  P++    I  PP I S+HP VLHP R + ++LTG FPP+PRIF+ ++ + P R+  +SPTEI++RV P  + +QL+  V A DGV+SP F+ +V ++LIP+S APLHASY Y  A Y L SLCTN T +VHF AHTL  PQ P++NVSYR S M PA+FR L+T +++T++ LP  +FS +     +VT++IT  HAGR+GQT+LF+++ +S  VFGISVFPH+H   PLQ+ A+L AS S   C  T +T++++IWRVNNTIV P+ N S +L A+   VTTGLGN L+VP  GRFVYVV AVL H  T +V+ARA ATG A+VR+    F+AVLNGA++ +TLP     YPIR +VY+QSQYGAL  S  +F ++WSCT V D   SPCT+QLFSPWL  E +  SNFQISTVGVEAGTRV YS+ V++     Q L+L + +  +    +FP +AKL +AST  +R ++ +GP+F+CFES+ +SWNQ +S+PLDFKL R+G+  D L++  + +++ + GYW ++  +GRFFAVS S L +GR+ L+GAV+  AGPG G SWRF VE C +L++ ++P+T+G AN TVF+A+AYSLPSSD LYAF+L+P  ++P+ ++ ++   G +   F  S CL+GCTGK AV FTV R G+YR+ V+MYDPSG YLL SE  N+TI V   D I    LG   A+ LN +V+H DE  F D + SI  G  S+  +V++     L+ +V+SPA NALQ T +V+AC R+L LE    +  ++ TL I++AA+  S+ SGS GFH+R+AL +FY +AT+ ++      D R + +  +E+ EMA +TR SAA++IP+VLSAGRACGV+D+ERV +       DG    T   +D+YRIGVSCF GQ++ L PEPA V TC   +   R +D  +YVLSS+EQ++V++T       +GPQM   L+++ +  G + L K++ S   CY TRVS    + +SE F  V + +RVTC   G++T+ +R +
Sbjct:   37 TKPRLLSVQSSSTLTAYVPHKLSVTLSHPVRNPRLQIFASPPLTLFPSSVSIINASITTLSFQIPPLPISSPQWRIAALHNNATILLHSPNSTIFRIIPPPSISSLHPSVLHPARLATVILTGVFPPNPRIFVLSQPVLPPRLLHVSPTEILIRVRPLRNQTQLNFVVRAPDGVNSPPFSATVAQNLIPLSAAPLHASYNYPTARYTLPSLCTNFTPLVHFDAHTLAQPQTPLYNVSYRVSTMPPAAFRPLRTLTNATMVLLPEALFSPNQDPRHIVTILITVTHAGRVGQTVLFVARTSSPHVFGISVFPHIHDQSPLQNAAILDASLSPHNCAATPNTTIRMIWRVNNTIVQPVSNASSTLDALSTAVTTGLGNRLVVPVHGRFVYVVHAVLLHRSTNKVLARAVATGSAIVRREALPFKAVLNGAASTVTLPSGTTTYPIRAEVYDQSQYGALSSSQRQFQYEWSCTSVFDGTESPCTAQLFSPWLLGERTEVSNFQISTVGVEAGTRVVYSLYVWSNGMRAQTLSLAVIVVPESGVKIFPIEAKLRTASTSFARNILRDGPLFKCFESVFVSWNQTLSDPLDFKLVRDGEQRDYLASSPDDIVIVHSGYWAKDDPYGRFFAVSVSALPSGRYTLYGAVDTNAGPGAGTSWRFVVETCPSLVVPDMPVTEGKANQTVFYASAYSLPSSDNLYAFLLQPVIDAPDGNDIAV---GAKATNFTSSVCLNGCTGKSAVWFTVPRPGQYRLVVEMYDPSGSYLLASEQRNTTITVEGLDTIQ-DDLGSMSADMLNMTVMHGDEPGFIDTIFSIPRGDDSISETVLNSTFNALESIVYSPATNALQNTHFVQACARLLELEIFTSTGYMQRTLDIVEAALTNSIYSGSPGFHIREALTEFYTAATKKLYL-----DWRVSRANKEELSEMAAKTRRSAAMTIPLVLSAGRACGVIDTERVDVSDIFEESDGVARRTEAKYDDYRIGVSCFPGQVESLPPEPAVVRTCRGSKQEDRKQDGNIYVLSSIEQNDVMKTCAEPDMFSGPQMQVLLFQQTELNGRIKLEKVNGSSSACYETRVSADVPRNMSEQFLSV-ENRRVTCTDAGSITDASRQR 1138          
BLAST of Gchil3812.t1 vs. uniprot
Match: R7QBP4_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QBP4_CHOCR)

HSP 1 Score: 122 bits (306), Expect = 7.270e-25
Identity = 101/365 (27.67%), Postives = 167/365 (45.75%), Query Frame = 0
Query:  774 MYDPSGMYLLGSETSNSTIIVTDS-------DDIDAQTLGGSVAEFLNSSVLHRDESRFFDFLQSIQNGTTSLETSVVDLVTAT--LKLVVFSPAVNALQCTQYVEACGRVLGLEALN-VSALESTLTIIDAAVQQSVSSGSVGFHLRQALKDFYGSATEMVHKMAQGGDSRDAESGDEIKEMADRTRNSAALSIPMVLSAGRACGVVDSERVYLKGTVGLKDGGGAGTVEAFDEYRIGVSCFAGQIKKLGPEPATVHTCGEERGLIRGEDEEMYVLSSVEQHNVLETEVGASTLAGPQMNARLYKRVKQRG-----NMHLVKISESCCGCYRTRVSVYATQAVSETFSLVGDGKRVTCRGGGTV 1123
            MYDP+G  LL S+  +  I V DS          DA  + GS+A     S+   DE  F  F+  +   T     S  D  TA   LK +  S   N  Q  + ++ C  ++  E  + +  L S + ++ + V+++  S S G  ++ +L  FYG+A + +   + G DSR+ ++ +   +     R +A+  + +VL+ G  CG      V                   FD+YR+G++CF GQ++ L P+P  +  C  E G   G +  + + ++ E+H   + ++   TL GP     LY    Q G     ++ LVK S     C+R+ VSV+  +  +E  S   DG R+TCR  G +
Sbjct:    1 MYDPTGTVLLESKDEDVEIHVRDSMTTSTLSSPADADDVAGSMAR----SLTQMDEVAFLGFVVQL---TALPSVSPGDFETAVDGLKKISSSRMRNPFQAVRVIDTCAGIVQHEDFSRLDLLRSLVLVVQSCVRRTQQSLSSGKEIKDSLARFYGAAADTI-AASSGSDSRNLQTSEGDGDPMGDVRTAASQDLFLVLAMGAECGAAARVAVPRLSAASSTQKESDSNNSLFDDYRVGINCFGGQVRSLSPDPPLLEICRGEPGRNTGVNAGVEIFTAAERHETCDRDLPTETLQGPT----LYVETLQWGGDGTQDLGLVK-SNPKGECFRSTVSVFGMKG-NEEDSRFKDGNRITCRNAGKI 351          
The following BLAST results are available for this feature:
BLAST of Gchil3812.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J364_9FLOR0.000e+047.75Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QBP4_CHOCR7.270e-2527.67Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1126..1179
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..1325
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000010_piloncontigtig00000010_pilon:593512..598245 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3812.t1Gchil3812.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000010_pilon 593512..598245 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil3812.t1 ID=Gchil3812.t1|Name=Gchil3812.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=1326bp
MPLSLVSILPFAWLLSASLACISRPAIVAATWPPALSAFTPHNLTVVVSA
PLLRPRFQVLSTPPQNLFPVSTTPTSSGTVALLFRLPALPPSRPQWQLRI
FHNNSDSFLTHPSNRRLNIRLPPLIRSIHPRVLHPFRTSLILLTGNFPPD
PRIFIANRRIPPRRIPSISPTEIIVRVSPSFSVSQLSIFVLAVDGVSSPI
FNISVRRDLIPISLAPLHASYQYSAAHYILSSLCTNSTAVVHFQAHTLPN
PQVPVFNVSYRTSAMSPASFRRLQTFSSSTVLALPHHIFSESHQSDRVVT
VVITCAHAGRIGQTILFISQRTSAQVFGISVFPHVHQMVPLQSTAVLRAS
FSSIYCPKTADTSVQLIWRVNNTIVHPLQNTSKSLHAIVRPVTTGLGNTL
IVPTEGRFVYVVQAVLQHTVTRRVIARAAATGVAVVRKNFPSFQAVLNGA
STAITLPPEIKDYPIRVDVYEQSQYGALLVSPARFMFQWSCTMVLDDVTS
PCTSQLFSPWLATESSTTSNFQISTVGVEAGTRVEYSVLVYNELSATQRL
NLTLNIAVQENTLVFPSDAKLGSASTYPSRRVINEGPVFECFESIILSWN
QKISEPLDFKLFREGQLTDILSNGTEGLIVPYDGYWTRERRFGRFFAVSA
SILGAGRFVLHGAVNRTAGPGVGMSWRFSVEGCATLILSNLPITDGTANV
TVFHAAAYSLPSSDKLYAFMLRPESPNMDEASISSDGRQNVAFDLSACLD
GCTGKPAVSFTVRRAGRYRIAVKMYDPSGMYLLGSETSNSTIIVTDSDDI
DAQTLGGSVAEFLNSSVLHRDESRFFDFLQSIQNGTTSLETSVVDLVTAT
LKLVVFSPAVNALQCTQYVEACGRVLGLEALNVSALESTLTIIDAAVQQS
VSSGSVGFHLRQALKDFYGSATEMVHKMAQGGDSRDAESGDEIKEMADRT
RNSAALSIPMVLSAGRACGVVDSERVYLKGTVGLKDGGGAGTVEAFDEYR
IGVSCFAGQIKKLGPEPATVHTCGEERGLIRGEDEEMYVLSSVEQHNVLE
TEVGASTLAGPQMNARLYKRVKQRGNMHLVKISESCCGCYRTRVSVYATQ
AVSETFSLVGDGKRVTCRGGGTVTEWTRHQQRDGGAPGAAAGAHPPRAQR
VRGAHRRQGGGEHSAERAAGGAGGQHGIRAQRGVPTIAARHVPRHLTGAQ
HGARDGDAVATARAVALLHQPVRVGLPAGAAGRRAATAGRICAAAAQLSD
VGAAQCERATTATAAAHATLGPCAGGRDADGRGAAGRDAADTARGAAPRR
RRGGGRAAAALCDGRGVDGGVAAHV*
back to top