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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 42345.XP_008789255.1 |
| PFAMs | WD40 |
| Max annot lvl | 35493|Streptophyta |
| KEGG ko | ko:K11374 |
| GOs | GO:0000123,GO:0000502,GO:0001101,GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0006139,GO:0006351,GO:0006354,GO:0006355,GO:0006357,GO:0006366,GO:0006368,GO:0006725,GO:0006807,GO:0006950,GO:0006979,GO:0008023,GO:0008047,GO:0008150,GO:0008152,GO:0008284,GO:0009058,GO:0009059,GO:0009719,GO:0009725,GO:0009737,GO:0009889,GO:0009892,GO:0009893,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010556,GO:0010604,GO:0010950,GO:0010952,GO:0016043,GO:0016070,GO:0016504,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0022607,GO:0030162,GO:0030234,GO:0031248,GO:0031323,GO:0031325,GO:0031326,GO:0031347,GO:0031349,GO:0031537,GO:0031538,GO:0031974,GO:0031981,GO:0032268,GO:0032270,GO:0032774,GO:0032991,GO:0033588,GO:0033993,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0042127,GO:0042221,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043248,GO:0043933,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0045862,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048583,GO:0048584,GO:0048831,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051239,GO:0051246,GO:0051247,GO:0051252,GO:0051336,GO:0051345,GO:0052547,GO:0052548,GO:0060255,GO:0061133,GO:0061134,GO:0061135,GO:0065003,GO:0065007,GO:0065009,GO:0070013,GO:0071704,GO:0071840,GO:0080090,GO:0080134,GO:0090304,GO:0097305,GO:0097659,GO:0098772,GO:1901360,GO:1901362,GO:1901576,GO:1901700,GO:1902493,GO:1902494,GO:1903506,GO:1905368,GO:1905369,GO:1990234,GO:2000024,GO:2000026,GO:2000112,GO:2001141 |
| Evalue | 2.17e-78 |
| EggNOG OGs | KOG1063@1|root,KOG1063@2759|Eukaryota,37JUN@33090|Viridiplantae,3GGED@35493|Streptophyta,3KN0R@4447|Liliopsida |
| Description | WD domain, G-beta repeat |
| COG category | BK |
| BRITE | ko00000,ko03016,ko03036 |
Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gchil4162.t1 ID=Gchil4162.t1|Name=Gchil4162.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=776bp MNPELSFVAAACNRKTGVLTSLRSHKIAAYGSSSNAMILDIPSFSVSSVL PIHKTTVTSLKFSALNSCILLFAGSADGAVSVAVFEDGNWFVRSSPVKHS SSCVAIDSISIGGKILTVSIGSDRLLCASLYDGVLFSAISSVFMVSNPGG RETLPECIAICSVTPKDVLIAVGGTDPRIQLYHANVDETVSISFLTYLDG HRDWIRGVAFSKSHSGFFLASASKDSTARVWSVACDAAKSESDSFLPSPT ITINVSDIGICLSAIALLDEHTAAVHSISFAEAADEPHILTSSMDCTVAV WKLSQSNAVCMARFGLMGGQSAHALGFFGAEFPLTDVGCVLAHNFSGALH RWEFVKASGSSSYEYFAHPAPTGHSDKVTDLAWAPSGSFLLSCSADKTAR VYAENKGSFVEWARPQVHGHSIFTLSFCDKEGKRYVSGAEERMLRVFEAP SSFRLPGESVAYEEKKPVSATMPQLGLSNKAIFAEETTDDLSGASDMIVS TFGVRKAGTAGGPLEEDLKQSRLWPEKMKMYGHGNEISAVAVHFQTGVIA SACRSQVQKDAVILLWDVESGAECARLPIHELTINELRFTADGNHLVSVS RDRSVCVFVKEVLSDRFGFKILWHKKGAHSREVYCCSWVSDGDIVATGGR DKCIRVFSSVDKNGNVGCELMKQKYDSAVTTLDSLRFSSNDQKCLLALGL DNGSIRFRIASWDKLLSIQLRPLGGFGNEIRCGSRVTCIRWRPLGTEASK KKCVQTAVASEDYSVRVYSIRLDEN* back to topspliced messenger RNA >Gchil4162.t1 ID=Gchil4162.t1|Name=Gchil4162.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2328bp|location=Sequence derived from alignment at tig00004373_pilon:1134377..1136704- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.
ATGAATCCAGAACTTAGCTTTGTGGCTGCAGCATGTAATCGAAAGACCGG CGTTCTGACATCGCTTCGGTCTCATAAGATTGCAGCCTATGGATCCTCAA GTAATGCCATGATCCTTGACATTCCATCTTTCTCAGTCTCATCAGTATTA CCGATTCATAAAACTACTGTGACATCTCTCAAGTTTTCTGCACTCAACTC TTGTATTCTTCTGTTCGCAGGATCAGCTGATGGAGCAGTATCTGTTGCAG TGTTCGAAGACGGAAATTGGTTTGTAAGAAGTTCGCCGGTTAAACACAGT TCATCCTGTGTTGCCATTGACTCCATATCGATCGGGGGTAAAATATTAAC AGTGAGTATTGGCTCTGATAGATTATTGTGTGCATCGTTATATGACGGTG TCTTGTTCTCAGCAATATCATCTGTTTTCATGGTTTCAAATCCTGGAGGT AGAGAAACCCTCCCTGAATGTATCGCGATTTGCTCGGTGACGCCCAAAGA TGTACTAATAGCCGTGGGTGGTACAGATCCACGTATTCAACTATACCATG CCAATGTCGATGAAACAGTGTCCATCTCTTTCTTGACGTATCTTGATGGT CACAGGGATTGGATACGAGGTGTAGCTTTTTCCAAATCCCATTCTGGTTT CTTCTTGGCAAGTGCATCCAAAGACTCTACGGCGCGCGTATGGAGTGTAG CTTGTGATGCAGCAAAATCGGAATCAGATTCATTTTTACCTTCTCCGACA ATCACAATCAATGTGTCCGACATTGGTATATGCTTATCGGCAATCGCATT ACTTGATGAGCATACAGCTGCAGTTCATAGCATATCTTTTGCCGAGGCTG CTGACGAGCCCCACATTCTTACATCATCAATGGACTGCACGGTTGCAGTT TGGAAACTATCTCAATCTAATGCTGTCTGCATGGCACGTTTCGGACTCAT GGGAGGGCAGTCTGCTCACGCCCTAGGATTCTTCGGAGCCGAATTTCCAT TGACCGATGTTGGTTGTGTCCTAGCACACAATTTTTCAGGCGCACTTCAC AGATGGGAATTCGTGAAAGCGTCGGGCAGTTCTTCATACGAGTACTTTGC CCACCCAGCTCCAACCGGTCATTCTGACAAAGTTACAGACTTGGCATGGG CCCCTAGTGGATCGTTCCTTCTGTCCTGCAGCGCAGACAAGACGGCAAGG GTGTACGCTGAAAATAAAGGGTCATTCGTCGAATGGGCAAGGCCACAAGT TCACGGTCACTCCATATTTACGCTCTCTTTTTGTGACAAAGAGGGAAAAC GCTACGTTTCAGGAGCGGAAGAACGCATGCTGAGAGTATTTGAAGCTCCG TCTTCATTTCGCCTTCCTGGGGAATCTGTCGCTTATGAAGAAAAAAAGCC GGTATCCGCAACAATGCCTCAACTTGGACTTTCAAATAAAGCCATATTCG CAGAAGAAACAACAGATGATCTTAGTGGCGCAAGTGATATGATTGTGTCA ACATTTGGTGTCCGTAAGGCAGGAACCGCGGGGGGGCCGTTGGAGGAGGA TTTGAAACAGTCACGCTTATGGCCGGAAAAGATGAAAATGTACGGTCATG GAAACGAAATCTCCGCTGTTGCAGTTCATTTTCAGACTGGTGTGATAGCT TCGGCATGCCGATCACAGGTTCAAAAGGATGCTGTCATCCTTTTATGGGA TGTTGAGTCTGGGGCCGAATGTGCGAGGCTGCCTATTCACGAGCTTACCA TAAACGAATTGAGATTCACAGCTGATGGCAATCATTTGGTGTCTGTCTCA CGAGATAGATCGGTTTGTGTTTTCGTTAAAGAGGTCCTCTCTGATCGATT TGGCTTCAAGATTTTGTGGCACAAGAAAGGAGCTCATTCTAGAGAAGTGT ATTGCTGTTCATGGGTTTCTGATGGTGATATCGTTGCAACCGGTGGCCGT GACAAATGCATACGGGTATTTAGCTCGGTGGACAAAAACGGGAACGTTGG TTGCGAATTAATGAAGCAAAAGTATGACAGTGCAGTCACAACACTGGACT CGCTACGTTTCTCTTCGAACGACCAGAAATGTTTATTGGCCTTGGGGTTG GACAATGGTTCTATTCGATTCCGTATTGCTTCTTGGGATAAGCTTCTTAG CATTCAATTGAGACCTTTAGGTGGCTTTGGAAACGAAATAAGGTGTGGGA GCCGTGTGACTTGCATCCGTTGGCGACCATTAGGAACAGAAGCCTCAAAG AAGAAATGTGTTCAAACTGCTGTGGCAAGTGAAGACTATTCTGTGAGAGT TTACTCGATTAGATTGGATGAGAATTGA back to topprotein sequence of Gchil4162.t1 >Gchil4162.t1 ID=Gchil4162.t1|Name=Gchil4162.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=776bp
MNPELSFVAAACNRKTGVLTSLRSHKIAAYGSSSNAMILDIPSFSVSSVL PIHKTTVTSLKFSALNSCILLFAGSADGAVSVAVFEDGNWFVRSSPVKHS SSCVAIDSISIGGKILTVSIGSDRLLCASLYDGVLFSAISSVFMVSNPGG RETLPECIAICSVTPKDVLIAVGGTDPRIQLYHANVDETVSISFLTYLDG HRDWIRGVAFSKSHSGFFLASASKDSTARVWSVACDAAKSESDSFLPSPT ITINVSDIGICLSAIALLDEHTAAVHSISFAEAADEPHILTSSMDCTVAV WKLSQSNAVCMARFGLMGGQSAHALGFFGAEFPLTDVGCVLAHNFSGALH RWEFVKASGSSSYEYFAHPAPTGHSDKVTDLAWAPSGSFLLSCSADKTAR VYAENKGSFVEWARPQVHGHSIFTLSFCDKEGKRYVSGAEERMLRVFEAP SSFRLPGESVAYEEKKPVSATMPQLGLSNKAIFAEETTDDLSGASDMIVS TFGVRKAGTAGGPLEEDLKQSRLWPEKMKMYGHGNEISAVAVHFQTGVIA SACRSQVQKDAVILLWDVESGAECARLPIHELTINELRFTADGNHLVSVS RDRSVCVFVKEVLSDRFGFKILWHKKGAHSREVYCCSWVSDGDIVATGGR DKCIRVFSSVDKNGNVGCELMKQKYDSAVTTLDSLRFSSNDQKCLLALGL DNGSIRFRIASWDKLLSIQLRPLGGFGNEIRCGSRVTCIRWRPLGTEASK KKCVQTAVASEDYSVRVYSIRLDEN* back to topmRNA from alignment at tig00004373_pilon:1134377..1136704- Legend: polypeptideCDSexonstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gchil4162.t1 ID=Gchil4162.t1|Name=Gchil4162.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2328bp|location=Sequence derived from alignment at tig00004373_pilon:1134377..1136704- (Gracilaria chilensis NLEC103_M9 male) ATGAATCCAGAACTTAGCTTTGTGGCTGCAGCATGTAATCGAAAGACCGG
CGTTCTGACATCGCTTCGGTCTCATAAGATTGCAGCCTATGGATCCTCAA
GTAATGCCATGATCCTTGACATTCCATCTTTCTCAGTCTCATCAGTATTA
CCGATTCATAAAACTACTGTGACATCTCTCAAGTTTTCTGCACTCAACTC
TTGTATTCTTCTGTTCGCAGGATCAGCTGATGGAGCAGTATCTGTTGCAG
TGTTCGAAGACGGAAATTGGTTTGTAAGAAGTTCGCCGGTTAAACACAGT
TCATCCTGTGTTGCCATTGACTCCATATCGATCGGGGGTAAAATATTAAC
AGTGAGTATTGGCTCTGATAGATTATTGTGTGCATCGTTATATGACGGTG
TCTTGTTCTCAGCAATATCATCTGTTTTCATGGTTTCAAATCCTGGAGGT
AGAGAAACCCTCCCTGAATGTATCGCGATTTGCTCGGTGACGCCCAAAGA
TGTACTAATAGCCGTGGGTGGTACAGATCCACGTATTCAACTATACCATG
CCAATGTCGATGAAACAGTGTCCATCTCTTTCTTGACGTATCTTGATGGT
CACAGGGATTGGATACGAGGTGTAGCTTTTTCCAAATCCCATTCTGGTTT
CTTCTTGGCAAGTGCATCCAAAGACTCTACGGCGCGCGTATGGAGTGTAG
CTTGTGATGCAGCAAAATCGGAATCAGATTCATTTTTACCTTCTCCGACA
ATCACAATCAATGTGTCCGACATTGGTATATGCTTATCGGCAATCGCATT
ACTTGATGAGCATACAGCTGCAGTTCATAGCATATCTTTTGCCGAGGCTG
CTGACGAGCCCCACATTCTTACATCATCAATGGACTGCACGGTTGCAGTT
TGGAAACTATCTCAATCTAATGCTGTCTGCATGGCACGTTTCGGACTCAT
GGGAGGGCAGTCTGCTCACGCCCTAGGATTCTTCGGAGCCGAATTTCCAT
TGACCGATGTTGGTTGTGTCCTAGCACACAATTTTTCAGGCGCACTTCAC
AGATGGGAATTCGTGAAAGCGTCGGGCAGTTCTTCATACGAGTACTTTGC
CCACCCAGCTCCAACCGGTCATTCTGACAAAGTTACAGACTTGGCATGGG
CCCCTAGTGGATCGTTCCTTCTGTCCTGCAGCGCAGACAAGACGGCAAGG
GTGTACGCTGAAAATAAAGGGTCATTCGTCGAATGGGCAAGGCCACAAGT
TCACGGTCACTCCATATTTACGCTCTCTTTTTGTGACAAAGAGGGAAAAC
GCTACGTTTCAGGAGCGGAAGAACGCATGCTGAGAGTATTTGAAGCTCCG
TCTTCATTTCGCCTTCCTGGGGAATCTGTCGCTTATGAAGAAAAAAAGCC
GGTATCCGCAACAATGCCTCAACTTGGACTTTCAAATAAAGCCATATTCG
CAGAAGAAACAACAGATGATCTTAGTGGCGCAAGTGATATGATTGTGTCA
ACATTTGGTGTCCGTAAGGCAGGAACCGCGGGGGGGCCGTTGGAGGAGGA
TTTGAAACAGTCACGCTTATGGCCGGAAAAGATGAAAATGTACGGTCATG
GAAACGAAATCTCCGCTGTTGCAGTTCATTTTCAGACTGGTGTGATAGCT
TCGGCATGCCGATCACAGGTTCAAAAGGATGCTGTCATCCTTTTATGGGA
TGTTGAGTCTGGGGCCGAATGTGCGAGGCTGCCTATTCACGAGCTTACCA
TAAACGAATTGAGATTCACAGCTGATGGCAATCATTTGGTGTCTGTCTCA
CGAGATAGATCGGTTTGTGTTTTCGTTAAAGAGGTCCTCTCTGATCGATT
TGGCTTCAAGATTTTGTGGCACAAGAAAGGAGCTCATTCTAGAGAAGTGT
ATTGCTGTTCATGGGTTTCTGATGGTGATATCGTTGCAACCGGTGGCCGT
GACAAATGCATACGGGTATTTAGCTCGGTGGACAAAAACGGGAACGTTGG
TTGCGAATTAATGAAGCAAAAGTATGACAGTGCAGTCACAACACTGGACT
CGCTACGTTTCTCTTCGAACGACCAGAAATGTTTATTGGCCTTGGGGTTG
GACAATGGTTCTATTCGATTCCGTATTGCTTCTTGGGATAAGCTTCTTAG
CATTCAATTGAGACCTTTAGGTGGCTTTGGAAACGAAATAAGGTGTGGGA
GCCGTGTGACTTGCATCCGTTGGCGACCATTAGGAACAGAAGCCTCAAAG
AAGAAATGTGTTCAAACTGCTGTGGCAAGTGAAGACTATTCTGTGAGAGT
TTACTCGATTAGATTGGATGAGAATTGA back to topCoding sequence (CDS) from alignment at tig00004373_pilon:1134377..1136704- >Gchil4162.t1 ID=Gchil4162.t1|Name=Gchil4162.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=2328bp|location=Sequence derived from alignment at tig00004373_pilon:1134377..1136704- (Gracilaria chilensis NLEC103_M9 male) ATGAATCCAGAACTTAGCTTTGTGGCTGCAGCATGTAATCGAAAGACCGG CGTTCTGACATCGCTTCGGTCTCATAAGATTGCAGCCTATGGATCCTCAA GTAATGCCATGATCCTTGACATTCCATCTTTCTCAGTCTCATCAGTATTA CCGATTCATAAAACTACTGTGACATCTCTCAAGTTTTCTGCACTCAACTC TTGTATTCTTCTGTTCGCAGGATCAGCTGATGGAGCAGTATCTGTTGCAG TGTTCGAAGACGGAAATTGGTTTGTAAGAAGTTCGCCGGTTAAACACAGT TCATCCTGTGTTGCCATTGACTCCATATCGATCGGGGGTAAAATATTAAC AGTGAGTATTGGCTCTGATAGATTATTGTGTGCATCGTTATATGACGGTG TCTTGTTCTCAGCAATATCATCTGTTTTCATGGTTTCAAATCCTGGAGGT AGAGAAACCCTCCCTGAATGTATCGCGATTTGCTCGGTGACGCCCAAAGA TGTACTAATAGCCGTGGGTGGTACAGATCCACGTATTCAACTATACCATG CCAATGTCGATGAAACAGTGTCCATCTCTTTCTTGACGTATCTTGATGGT CACAGGGATTGGATACGAGGTGTAGCTTTTTCCAAATCCCATTCTGGTTT CTTCTTGGCAAGTGCATCCAAAGACTCTACGGCGCGCGTATGGAGTGTAG CTTGTGATGCAGCAAAATCGGAATCAGATTCATTTTTACCTTCTCCGACA ATCACAATCAATGTGTCCGACATTGGTATATGCTTATCGGCAATCGCATT ACTTGATGAGCATACAGCTGCAGTTCATAGCATATCTTTTGCCGAGGCTG CTGACGAGCCCCACATTCTTACATCATCAATGGACTGCACGGTTGCAGTT TGGAAACTATCTCAATCTAATGCTGTCTGCATGGCACGTTTCGGACTCAT GGGAGGGCAGTCTGCTCACGCCCTAGGATTCTTCGGAGCCGAATTTCCAT TGACCGATGTTGGTTGTGTCCTAGCACACAATTTTTCAGGCGCACTTCAC AGATGGGAATTCGTGAAAGCGTCGGGCAGTTCTTCATACGAGTACTTTGC CCACCCAGCTCCAACCGGTCATTCTGACAAAGTTACAGACTTGGCATGGG CCCCTAGTGGATCGTTCCTTCTGTCCTGCAGCGCAGACAAGACGGCAAGG GTGTACGCTGAAAATAAAGGGTCATTCGTCGAATGGGCAAGGCCACAAGT TCACGGTCACTCCATATTTACGCTCTCTTTTTGTGACAAAGAGGGAAAAC GCTACGTTTCAGGAGCGGAAGAACGCATGCTGAGAGTATTTGAAGCTCCG TCTTCATTTCGCCTTCCTGGGGAATCTGTCGCTTATGAAGAAAAAAAGCC GGTATCCGCAACAATGCCTCAACTTGGACTTTCAAATAAAGCCATATTCG CAGAAGAAACAACAGATGATCTTAGTGGCGCAAGTGATATGATTGTGTCA ACATTTGGTGTCCGTAAGGCAGGAACCGCGGGGGGGCCGTTGGAGGAGGA TTTGAAACAGTCACGCTTATGGCCGGAAAAGATGAAAATGTACGGTCATG GAAACGAAATCTCCGCTGTTGCAGTTCATTTTCAGACTGGTGTGATAGCT TCGGCATGCCGATCACAGGTTCAAAAGGATGCTGTCATCCTTTTATGGGA TGTTGAGTCTGGGGCCGAATGTGCGAGGCTGCCTATTCACGAGCTTACCA TAAACGAATTGAGATTCACAGCTGATGGCAATCATTTGGTGTCTGTCTCA CGAGATAGATCGGTTTGTGTTTTCGTTAAAGAGGTCCTCTCTGATCGATT TGGCTTCAAGATTTTGTGGCACAAGAAAGGAGCTCATTCTAGAGAAGTGT ATTGCTGTTCATGGGTTTCTGATGGTGATATCGTTGCAACCGGTGGCCGT GACAAATGCATACGGGTATTTAGCTCGGTGGACAAAAACGGGAACGTTGG TTGCGAATTAATGAAGCAAAAGTATGACAGTGCAGTCACAACACTGGACT CGCTACGTTTCTCTTCGAACGACCAGAAATGTTTATTGGCCTTGGGGTTG GACAATGGTTCTATTCGATTCCGTATTGCTTCTTGGGATAAGCTTCTTAG CATTCAATTGAGACCTTTAGGTGGCTTTGGAAACGAAATAAGGTGTGGGA GCCGTGTGACTTGCATCCGTTGGCGACCATTAGGAACAGAAGCCTCAAAG AAGAAATGTGTTCAAACTGCTGTGGCAAGTGAAGACTATTCTGTGAGAGT TTACTCGATTAGATTGGATGAGAATTGA back to top
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